BLASTX nr result

ID: Panax21_contig00028516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028516
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333705.1| predicted protein [Populus trichocarpa] gi|2...   154   6e-36
ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subuni...   149   2e-34
ref|XP_004168979.1| PREDICTED: anaphase-promoting complex subuni...   142   2e-32
ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subuni...   142   2e-32
ref|XP_003527204.1| PREDICTED: anaphase-promoting complex subuni...   142   3e-32

>ref|XP_002333705.1| predicted protein [Populus trichocarpa] gi|222838031|gb|EEE76396.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  154 bits (390), Expect = 6e-36
 Identities = 73/84 (86%), Positives = 77/84 (91%)
 Frame = +2

Query: 2   HALRKLRRYHEAISYYEKALALSTRSLSTYAGLAYTYHLQDNYTAAITCYHKALWLKPDD 181
           HA RKL+ YHEAISYYE+AL LS RSLSTYAGLAYTYHLQDN+TAAITCYHKALWLKPDD
Sbjct: 31  HAYRKLKIYHEAISYYERALTLSPRSLSTYAGLAYTYHLQDNFTAAITCYHKALWLKPDD 90

Query: 182 QFCTEMLTLALVDESHGGIDPKIE 253
           QFCTEML+LALVDE   GIDPKIE
Sbjct: 91  QFCTEMLSLALVDEGRRGIDPKIE 114


>ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subunit 6 [Vitis vinifera]
           gi|302142883|emb|CBI20178.3| unnamed protein product
           [Vitis vinifera]
          Length = 545

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = +2

Query: 2   HALRKLRRYHEAISYYEKALALSTRSLSTYAGLAYTYHLQDNYTAAITCYHKALWLKPDD 181
           HA RKL+ YHEAIS+YEKAL LSTRSLSTYAGLAYTYHLQDN+ AAIT YHKALWLKPDD
Sbjct: 460 HAYRKLKMYHEAISFYEKALTLSTRSLSTYAGLAYTYHLQDNFPAAITYYHKALWLKPDD 519

Query: 182 QFCTEMLTLALVDESHGGIDPKIES 256
           QFCTEMLTLALVDE+  G+DP+ ES
Sbjct: 520 QFCTEMLTLALVDEARRGLDPRNES 544


>ref|XP_004168979.1| PREDICTED: anaphase-promoting complex subunit 6-like [Cucumis
           sativus]
          Length = 241

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/84 (79%), Positives = 75/84 (89%)
 Frame = +2

Query: 2   HALRKLRRYHEAISYYEKALALSTRSLSTYAGLAYTYHLQDNYTAAITCYHKALWLKPDD 181
           H+ RKL+ Y EAI YYEKALALSTRSLSTYAGLAYT HLQD++TAAIT YHKALWLKPDD
Sbjct: 156 HSYRKLKMYREAIKYYEKALALSTRSLSTYAGLAYTCHLQDHFTAAITYYHKALWLKPDD 215

Query: 182 QFCTEMLTLALVDESHGGIDPKIE 253
           QFCTEML+LAL+DE   G+DPK+E
Sbjct: 216 QFCTEMLSLALMDECQNGMDPKVE 239


>ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subunit 6-like [Cucumis
           sativus]
          Length = 547

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/84 (79%), Positives = 75/84 (89%)
 Frame = +2

Query: 2   HALRKLRRYHEAISYYEKALALSTRSLSTYAGLAYTYHLQDNYTAAITCYHKALWLKPDD 181
           H+ RKL+ Y EAI YYEKALALSTRSLSTYAGLAYT HLQD++TAAIT YHKALWLKPDD
Sbjct: 462 HSYRKLKMYREAIKYYEKALALSTRSLSTYAGLAYTCHLQDHFTAAITYYHKALWLKPDD 521

Query: 182 QFCTEMLTLALVDESHGGIDPKIE 253
           QFCTEML+LAL+DE   G+DPK+E
Sbjct: 522 QFCTEMLSLALMDECQNGMDPKVE 545


>ref|XP_003527204.1| PREDICTED: anaphase-promoting complex subunit 6-like [Glycine max]
          Length = 545

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/84 (78%), Positives = 74/84 (88%)
 Frame = +2

Query: 2   HALRKLRRYHEAISYYEKALALSTRSLSTYAGLAYTYHLQDNYTAAITCYHKALWLKPDD 181
           HA RKL+ Y EAISYYEKALALSTRS+STYAGLAYTYHLQD++T AI  YHKALWLKPDD
Sbjct: 460 HAYRKLKMYREAISYYEKALALSTRSVSTYAGLAYTYHLQDDFTTAIAYYHKALWLKPDD 519

Query: 182 QFCTEMLTLALVDESHGGIDPKIE 253
           QFCTEML+ AL+DES  G+DP +E
Sbjct: 520 QFCTEMLSWALIDESRRGVDPSLE 543


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