BLASTX nr result

ID: Panax21_contig00028514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028514
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526954.1| protein with unknown function [Ricinus commu...   134   2e-42
ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane prot...   128   1e-41
ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane prot...   125   3e-39
gb|ABK27134.1| unknown [Picea sitchensis]                             125   2e-38
ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|2...   124   5e-38

>ref|XP_002526954.1| protein with unknown function [Ricinus communis]
           gi|223533706|gb|EEF35441.1| protein with unknown
           function [Ricinus communis]
          Length = 187

 Score =  134 bits (337), Expect(2) = 2e-42
 Identities = 61/80 (76%), Positives = 68/80 (85%)
 Frame = -2

Query: 242 CSIGDNFVKAVNCNERMNASGGLSPGDGIIVCSNTMTFQDEVDQVVIHELIHAYDQCRAA 63
           C IGDNF+KAVNC ++M  SGG   GDGI+VCSN M  QDEV+QVVIHELIHAYD CRAA
Sbjct: 44  CGIGDNFIKAVNCEKKM--SGGYVSGDGIVVCSNHMNMQDEVNQVVIHELIHAYDDCRAA 101

Query: 62  SLDWSNCSHHACSEIRAGHL 3
           +LDW+NC HHACSEIRAGHL
Sbjct: 102 NLDWANCVHHACSEIRAGHL 121



 Score = 63.9 bits (154), Expect(2) = 2e-42
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = -3

Query: 445 MEAEPDSNPASGSFSSAVNGGITVEECQNMIQKSIRTPMVKFMKEQMEKAGC 290
           ME EP + P SG        G T+EECQ+MI+KS+RTPMVKF++E +EKAGC
Sbjct: 1   MEGEPTNTPGSG--------GRTIEECQDMIRKSLRTPMVKFLREHLEKAGC 44


>ref|XP_002269112.1| PREDICTED: mitochondrial inner membrane protease ATP23 [Vitis
           vinifera] gi|296081332|emb|CBI17714.3| unnamed protein
           product [Vitis vinifera]
          Length = 195

 Score =  128 bits (321), Expect(2) = 1e-41
 Identities = 56/80 (70%), Positives = 69/80 (86%)
 Frame = -2

Query: 242 CSIGDNFVKAVNCNERMNASGGLSPGDGIIVCSNTMTFQDEVDQVVIHELIHAYDQCRAA 63
           C+IGD F+KA+ CN ++  SGG + G+GI+VCSN M  QDEV+QVVIHELIHAYD CRAA
Sbjct: 52  CAIGDKFIKAIYCNTKV--SGGYARGEGIVVCSNHMNIQDEVNQVVIHELIHAYDDCRAA 109

Query: 62  SLDWSNCSHHACSEIRAGHL 3
           +LDW+NC+HHACSEIR+GHL
Sbjct: 110 NLDWTNCAHHACSEIRSGHL 129



 Score = 67.0 bits (162), Expect(2) = 1e-41
 Identities = 31/52 (59%), Positives = 41/52 (78%), Gaps = 2/52 (3%)
 Frame = -3

Query: 436 EPDSNPA--SGSFSSAVNGGITVEECQNMIQKSIRTPMVKFMKEQMEKAGCS 287
           E DS P   +   SS VNGG+TV+EC+ MIQKS+RTPMVKF++E +EK+GC+
Sbjct: 2   EGDSAPTIPAADVSSGVNGGMTVKECEQMIQKSLRTPMVKFLRENLEKSGCA 53


>ref|XP_004142774.1| PREDICTED: mitochondrial inner membrane protease ATP23-like
           [Cucumis sativus] gi|449483813|ref|XP_004156699.1|
           PREDICTED: mitochondrial inner membrane protease
           ATP23-like [Cucumis sativus]
          Length = 195

 Score =  125 bits (313), Expect(2) = 3e-39
 Identities = 56/80 (70%), Positives = 68/80 (85%)
 Frame = -2

Query: 242 CSIGDNFVKAVNCNERMNASGGLSPGDGIIVCSNTMTFQDEVDQVVIHELIHAYDQCRAA 63
           C IGD F+KAV+C +++  SGG   G+GI+VCSN M  QDEV+QVVIHELIHA+D CRAA
Sbjct: 52  CGIGDRFIKAVHCEKQI--SGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAA 109

Query: 62  SLDWSNCSHHACSEIRAGHL 3
           +LDW+NC+HHACSEIRAGHL
Sbjct: 110 NLDWANCTHHACSEIRAGHL 129



 Score = 62.0 bits (149), Expect(2) = 3e-39
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = -3

Query: 445 MEAEPDSNPASGSFSSAVNGGITVEECQNMIQKSIRTPMVKFMKEQMEKAGC 290
           M  E    P S    S+VNGG T EEC++MI++S+RTPMVKF+ E +EK+GC
Sbjct: 1   MAEESTPEPGSNRSYSSVNGGRTKEECEDMIRRSLRTPMVKFLMEHLEKSGC 52


>gb|ABK27134.1| unknown [Picea sitchensis]
          Length = 197

 Score =  125 bits (315), Expect(2) = 2e-38
 Identities = 56/80 (70%), Positives = 68/80 (85%)
 Frame = -2

Query: 242 CSIGDNFVKAVNCNERMNASGGLSPGDGIIVCSNTMTFQDEVDQVVIHELIHAYDQCRAA 63
           CS+  NF KA+ C++++  SGG    +GI+VCSN MTFQDEVDQV+IHELIHAYD CRAA
Sbjct: 54  CSVNRNFFKAIECDKQI--SGGYLREEGILVCSNHMTFQDEVDQVIIHELIHAYDDCRAA 111

Query: 62  SLDWSNCSHHACSEIRAGHL 3
           +LDW+NC+HHACSEIRAGHL
Sbjct: 112 NLDWTNCAHHACSEIRAGHL 131



 Score = 58.5 bits (140), Expect(2) = 2e-38
 Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = -3

Query: 445 MEAEPDSNPASGSFSSAV--NGGITVEECQNMIQKSIRTPMVKFMKEQMEKAGCS 287
           ME   +  P+S S +S++  + G T EEC+ MIQKS R+P VKF++E +EKAGCS
Sbjct: 1   MEDSAEKKPSSSSVASSLYSSTGTTKEECERMIQKSFRSPTVKFLREHLEKAGCS 55


>ref|XP_002300068.1| predicted protein [Populus trichocarpa] gi|222847326|gb|EEE84873.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  124 bits (310), Expect(2) = 5e-38
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = -2

Query: 242 CSIGDNFVKAVNCNERMNASGGLSPGDGIIVCSNTMTFQDEVDQVVIHELIHAYDQCRAA 63
           C +G+NF+KAVNC++++  +GG   G+GI+VCSN M  QD+V+QVVIHELIHAYD CRAA
Sbjct: 44  CGVGENFLKAVNCDKKI--AGGYVRGEGIMVCSNHMNTQDDVNQVVIHELIHAYDDCRAA 101

Query: 62  SLDWSNCSHHACSEIRAGHL 3
           +LDW++C+HHACSEIRAGHL
Sbjct: 102 NLDWADCAHHACSEIRAGHL 121



 Score = 59.3 bits (142), Expect(2) = 5e-38
 Identities = 29/52 (55%), Positives = 35/52 (67%)
 Frame = -3

Query: 445 MEAEPDSNPASGSFSSAVNGGITVEECQNMIQKSIRTPMVKFMKEQMEKAGC 290
           M  EP + P S         G TVEEC+NMI++S RTPMVKF++E MEKAGC
Sbjct: 1   MTEEPGTTPGSD--------GTTVEECKNMIRRSFRTPMVKFLREHMEKAGC 44


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