BLASTX nr result

ID: Panax21_contig00028497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028497
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN07652.1| cap-binding protein 80 [Solanum tuberosum]             228   5e-58
gb|ACN43585.1| nuclear cap-binding protein [Solanum tuberosum] g...   228   5e-58
gb|ACN43587.1| nuclear cap-binding protein [Solanum tuberosum]        226   2e-57
gb|ACN43583.1| nuclear cap-binding protein [Solanum tuberosum] g...   226   2e-57
gb|ACN43588.1| nuclear cap-binding protein [Solanum tuberosum]        224   4e-57

>gb|AFN07652.1| cap-binding protein 80 [Solanum tuberosum]
          Length = 861

 Score =  228 bits (580), Expect = 5e-58
 Identities = 110/135 (81%), Positives = 120/135 (88%), Gaps = 3/135 (2%)
 Frame = +3

Query: 3   DMECRTRLILWFSHHLSNFQFIWPWEEWAYVLNLPKWAPKRVFVQEVLEREVRLSYWDKV 182
           DMECRTRLILWFSHHLSNFQFIWPWEEWAYVL+LPKWAP+RVFVQEVLEREVRLSYWDK+
Sbjct: 404 DMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKI 463

Query: 183 KQSIENASALEELLPPKGGGSDLKYSAEDG---AEHALSAELKGLVKGRKIAREVISWMD 353
           KQSIENA ALEELLPP+ GG   KYSAEDG    E ALS ELK +VKGRK ARE+ISW++
Sbjct: 464 KQSIENAPALEELLPPR-GGPQFKYSAEDGTDPTERALSLELKDMVKGRKTAREMISWVE 522

Query: 354 ESVLPAHGFDISLKV 398
           E+V PAHGFDI+L V
Sbjct: 523 ENVFPAHGFDITLGV 537


>gb|ACN43585.1| nuclear cap-binding protein [Solanum tuberosum]
           gi|224460071|gb|ACN43586.1| nuclear cap-binding protein
           [Solanum tuberosum]
          Length = 861

 Score =  228 bits (580), Expect = 5e-58
 Identities = 110/135 (81%), Positives = 120/135 (88%), Gaps = 3/135 (2%)
 Frame = +3

Query: 3   DMECRTRLILWFSHHLSNFQFIWPWEEWAYVLNLPKWAPKRVFVQEVLEREVRLSYWDKV 182
           DMECRTRLILWFSHHLSNFQFIWPWEEWAYVL+LPKWAP+RVFVQEVLEREVRLSYWDK+
Sbjct: 404 DMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKI 463

Query: 183 KQSIENASALEELLPPKGGGSDLKYSAEDG---AEHALSAELKGLVKGRKIAREVISWMD 353
           KQSIENA ALEELLPP+ GG   KYSAEDG    E ALS ELK +VKGRK ARE+ISW++
Sbjct: 464 KQSIENAPALEELLPPR-GGPQFKYSAEDGTDPTERALSLELKDMVKGRKTAREMISWVE 522

Query: 354 ESVLPAHGFDISLKV 398
           E+V PAHGFDI+L V
Sbjct: 523 ENVFPAHGFDITLGV 537


>gb|ACN43587.1| nuclear cap-binding protein [Solanum tuberosum]
          Length = 861

 Score =  226 bits (576), Expect = 2e-57
 Identities = 109/135 (80%), Positives = 119/135 (88%), Gaps = 3/135 (2%)
 Frame = +3

Query: 3   DMECRTRLILWFSHHLSNFQFIWPWEEWAYVLNLPKWAPKRVFVQEVLEREVRLSYWDKV 182
           DMECRTRLILWFSHHLSNFQFIWPWEEWAYVL+LPKWAP+RVFVQEVLEREVRLSYWDK+
Sbjct: 404 DMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKI 463

Query: 183 KQSIENASALEELLPPKGGGSDLKYSAEDG---AEHALSAELKGLVKGRKIAREVISWMD 353
           KQSIENA ALEELLPP+ GG   KYSAEDG    E ALS ELK +VKGRK ARE+ISW++
Sbjct: 464 KQSIENAPALEELLPPR-GGPQFKYSAEDGTDPTERALSLELKDMVKGRKTAREMISWVE 522

Query: 354 ESVLPAHGFDISLKV 398
           E+V P HGFDI+L V
Sbjct: 523 ENVFPTHGFDITLGV 537


>gb|ACN43583.1| nuclear cap-binding protein [Solanum tuberosum]
           gi|224460077|gb|ACN43589.1| nuclear cap-binding protein
           [Solanum tuberosum]
          Length = 861

 Score =  226 bits (576), Expect = 2e-57
 Identities = 109/135 (80%), Positives = 119/135 (88%), Gaps = 3/135 (2%)
 Frame = +3

Query: 3   DMECRTRLILWFSHHLSNFQFIWPWEEWAYVLNLPKWAPKRVFVQEVLEREVRLSYWDKV 182
           DMECRTRLILWFSHHLSNFQFIWPWEEWAYVL+LPKWAP+RVFVQEVLEREVRLSYWDK+
Sbjct: 404 DMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKI 463

Query: 183 KQSIENASALEELLPPKGGGSDLKYSAEDG---AEHALSAELKGLVKGRKIAREVISWMD 353
           KQSIENA ALEELLPP+ GG   KYSAEDG    E ALS ELK +VKGRK ARE+ISW++
Sbjct: 464 KQSIENAPALEELLPPR-GGPQFKYSAEDGTDPTERALSLELKDMVKGRKTAREMISWVE 522

Query: 354 ESVLPAHGFDISLKV 398
           E+V P HGFDI+L V
Sbjct: 523 ENVFPTHGFDITLGV 537


>gb|ACN43588.1| nuclear cap-binding protein [Solanum tuberosum]
          Length = 861

 Score =  224 bits (572), Expect = 4e-57
 Identities = 109/135 (80%), Positives = 119/135 (88%), Gaps = 3/135 (2%)
 Frame = +3

Query: 3   DMECRTRLILWFSHHLSNFQFIWPWEEWAYVLNLPKWAPKRVFVQEVLEREVRLSYWDKV 182
           DMECRTRLILW SHHLSNFQFIWPWEEWAYVL+LPKWAP+RVFVQEVLEREVRLSYWDK+
Sbjct: 404 DMECRTRLILWSSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKI 463

Query: 183 KQSIENASALEELLPPKGGGSDLKYSAEDG---AEHALSAELKGLVKGRKIAREVISWMD 353
           KQSIENA ALEELLPP+ GG   KYSAEDG    E ALS ELK +VKGRK ARE+ISW++
Sbjct: 464 KQSIENAPALEELLPPR-GGPQFKYSAEDGTDPTERALSLELKDMVKGRKTAREMISWVE 522

Query: 354 ESVLPAHGFDISLKV 398
           E+V PAHGFDI+L V
Sbjct: 523 ENVFPAHGFDITLGV 537


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