BLASTX nr result

ID: Panax21_contig00028483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028483
         (1439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago ...   169   2e-39
ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabac...   116   2e-23
ref|YP_173419.1| hypothetical protein NitaMp077 [Nicotiana tabac...   107   8e-21
emb|CBI35735.3| unnamed protein product [Vitis vinifera]               89   5e-18
ref|XP_002534684.1| conserved hypothetical protein [Ricinus comm...    61   2e-17

>ref|XP_003588264.1| hypothetical protein MTR_1g005050 [Medicago truncatula]
            gi|355477312|gb|AES58515.1| hypothetical protein
            MTR_1g005050 [Medicago truncatula]
          Length = 334

 Score =  169 bits (428), Expect = 2e-39
 Identities = 94/138 (68%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
 Frame = +3

Query: 867  LFLFPVSFRRKGLHFPNLVG-LDGFVCPGLANRIPAQRHCLCAPYRSRSVFATAGKAVVE 1043
            LF+ PVSFRRKGL  PN VG       P  A  I + R+ + APYRSRSVFATAG+AVVE
Sbjct: 196  LFISPVSFRRKGLRIPNPVGGRTALFAP--AWLIASPRNDILAPYRSRSVFATAGEAVVE 253

Query: 1044 AKPIATPTIKYEIGPLLKDLMEWPSPPKSAYVIGELMAGNNPYGFDILSGRNNKNKSPGW 1223
            AKPIATPTIKYEIGPLLKDLMEWPSPPKSAYVI ELM                 N+SPGW
Sbjct: 254  AKPIATPTIKYEIGPLLKDLMEWPSPPKSAYVIWELM-----------------NQSPGW 296

Query: 1224 LVSLVIGDYLAWFGEHFL 1277
            LVSLVIGDYLAWFGEH L
Sbjct: 297  LVSLVIGDYLAWFGEHLL 314



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 35/48 (72%), Positives = 35/48 (72%)
 Frame = +3

Query: 276 LRRGKESKSMDINEPSLMDVAHDTINSTQGPALIEVAYSPSSEGKGAG 419
           L RGKESKSMDINEPSLMDVAHDTINSTQGPA   V     S    AG
Sbjct: 89  LGRGKESKSMDINEPSLMDVAHDTINSTQGPAAFFVVIVGGSHDIYAG 136


>ref|YP_173420.1| hypothetical protein NitaMp078 [Nicotiana tabacum]
           gi|56806583|dbj|BAD83484.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 122

 Score =  116 bits (290), Expect = 2e-23
 Identities = 57/64 (89%), Positives = 59/64 (92%)
 Frame = +3

Query: 234 LVWGLSGPSRSFS*LRRGKESKSMDINEPSLMDVAHDTINSTQGPALIEVAYSPSSEGKG 413
           ++WGLSGPSRSFS LRRGKESKSMDINEPSLMDVAHDTINSTQGPALIEVAY PSSEGKG
Sbjct: 10  VLWGLSGPSRSFSTLRRGKESKSMDINEPSLMDVAHDTINSTQGPALIEVAYFPSSEGKG 69

Query: 414 AGLF 425
              F
Sbjct: 70  RAFF 73


>ref|YP_173419.1| hypothetical protein NitaMp077 [Nicotiana tabacum]
           gi|56806582|dbj|BAD83483.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 104

 Score =  107 bits (267), Expect = 8e-21
 Identities = 58/87 (66%), Positives = 64/87 (73%)
 Frame = +1

Query: 10  LFFLLIQYNRGKGRTVPYRDKLSTDPPRAGHTSSVRLSRGGNRTTGKXXXXXXXXXXXXL 189
           LFFLLIQYNRGK RTVPYRDKLSTDPPRAG+TSSVRLSRGGNRTTGK            L
Sbjct: 22  LFFLLIQYNRGKDRTVPYRDKLSTDPPRAGNTSSVRLSRGGNRTTGK------DPAQGEL 75

Query: 190 FISDRMGSESKGFRSWFGGFRAPLDLF 270
           ++  R    ++    +FGGFRAPLDLF
Sbjct: 76  YLFKREWGVNRIPFPFFGGFRAPLDLF 102


>emb|CBI35735.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 89.4 bits (220), Expect(2) = 5e-18
 Identities = 48/67 (71%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -1

Query: 269 KRSRGARKP-PNQERKPFDSLPILSEINKARPRALGRSAGSFPVVLFPPRERRTEEVCPA 93
           K  RG + P P  E + F   P  S +NKARPRALGRSAGSFP+VLFPPRERRTEEVCPA
Sbjct: 12  KIERGPKAPKPRTETEAFRFTPH-SLLNKARPRALGRSAGSFPIVLFPPRERRTEEVCPA 70

Query: 92  RGGSVES 72
           RGGSVES
Sbjct: 71  RGGSVES 77



 Score = 29.3 bits (64), Expect(2) = 5e-18
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -2

Query: 70  CLGRELYDLFPY 35
           CL RELYDLFPY
Sbjct: 80  CLSRELYDLFPY 91



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 31/37 (83%), Positives = 32/37 (86%), Gaps = 2/37 (5%)
 Frame = -3

Query: 294 TPSPFSTTKKIERGPKAPKPR--TEAFRFTPHSI*NK 190
           TPSPF TT KIERGPKAPKPR  TEAFRFTPHS+ NK
Sbjct: 3   TPSPFPTTNKIERGPKAPKPRTETEAFRFTPHSLLNK 39


>ref|XP_002534684.1| conserved hypothetical protein [Ricinus communis]
           gi|223524768|gb|EEF27698.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 60.8 bits (146), Expect(2) = 2e-17
 Identities = 38/58 (65%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
 Frame = -1

Query: 296 RLLPPSQLRKRSRGARKP---PNQERKPFDSLPILSEINKARPRALGRSAGSFPVVLF 132
           RLLPPSQLR RSRGARK    P  E + F   P  S +NKARPRALGRSAGSF  +LF
Sbjct: 15  RLLPPSQLRIRSRGARKKAPKPRTETEAFLFTPH-SLLNKARPRALGRSAGSFLSLLF 71



 Score = 55.8 bits (133), Expect(2) = 2e-17
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -2

Query: 151 LSLLFCSRHEKDARKRYAQRAEDPLRV 71
           LSLLFC RHEKDARKRYAQRAEDPLRV
Sbjct: 67  LSLLFCFRHEKDARKRYAQRAEDPLRV 93


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