BLASTX nr result

ID: Panax21_contig00028478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028478
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02729.1| unnamed protein product [Arabidopsis thaliana]        117   4e-24
dbj|BAB02733.1| transposase-like protein [Arabidopsis thaliana]       101   2e-19
ref|NP_001043974.1| Os01g0698300 [Oryza sativa Japonica Group] g...    99   2e-18
gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsi...    97   8e-18
gb|EEC71336.1| hypothetical protein OsI_03395 [Oryza sativa Indi...    94   6e-17

>dbj|BAB02729.1| unnamed protein product [Arabidopsis thaliana]
          Length = 579

 Score =  117 bits (293), Expect = 4e-24
 Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 22/286 (7%)
 Frame = -2

Query: 793 DEHAGIDLQK-AHRLLADLICSCEVAPLAM-----LDFSNQL-NPFVKLDYDTVKANCLK 635
           D+   +D +K AH  +A    + +V P  +       F + L +P        V+    +
Sbjct: 8   DDSLVVDEEKEAHNAMAKWFIAADVNPKTINTRSFAKFMSFLGDPKYPPSVSKVENEVFE 67

Query: 634 IYEEEKVKVKNIFRNMDGQISLSVDVLR---------YYRCSGNYDKFMCLSAHFIDDSW 482
           IYEE K K KN F++  GQ++LS + +          + R    ++ F+CL+AHF+DD+W
Sbjct: 68  IYEECKEKAKNFFKSFQGQLNLSYEWMLLGNGWGARDHIRGPVLHEDFVCLTAHFVDDNW 127

Query: 481 KPRNWVLHFQHLWDWE---DDFISEAILKTLKDWEIEEKVSTFTSSSLXXXXXXXXXXXV 311
           K +  +L + +  D E   DD         ++D+EIE KVST    +             
Sbjct: 128 KMKKRILAYTNTTDQEIPMDDGYVYPFRNAVQDFEIENKVSTLLLPNSEDFDEETLDPFR 187

Query: 310 KSQIQTVKNLQLNGQLFRINCCAAMFNQMANDAFKEISD-IITKVSLLCYWK--SPPLWC 140
           K  I+ + N Q N ++  + CC+ +F  M +D   E+S  ++  V +L  W   S   W 
Sbjct: 188 K-WIEEIGNNQFNPRVSLVYCCSDLFRLMVDDVLSELSSSLLEDVRMLVGWGRCSATTWN 246

Query: 139 LTTYKLKMALEQESMGEYSSDKVSDFYDIPSCDEWKKVEVVCKLTD 2
           ++ + L+ A+  +S   +S D++ D YD PS ++W K++  CKLTD
Sbjct: 247 VSLFHLQQAVVLKSEDAFSKDEIYDDYDKPSDEDWIKIQTFCKLTD 292


>dbj|BAB02733.1| transposase-like protein [Arabidopsis thaliana]
          Length = 554

 Score =  101 bits (252), Expect = 2e-19
 Identities = 74/284 (26%), Positives = 142/284 (50%), Gaps = 14/284 (4%)
 Frame = -2

Query: 817 KDYRSENGDEHAGIDLQKAHRLLADLICSCEVAPL----AMLDFSNQLNPFVKLDYDTVK 650
           K    ++ D+ A  + ++ +R +A +     + P      + +  + + P   LD   +K
Sbjct: 9   KQKLDDSVDDEAQEEEKRRYRSMAKVAIGYGINPSDENSVIPEMIHTVCPDFSLDTSKLK 68

Query: 649 ANCLKIYEEEKVKVKNIFRNMDGQISLSVDVLRYYRCSGNYDK------FMCLSAHFIDD 488
           +  L+++EE K KVK + ++ +G+++L  +   ++  S + D+      F+ +SA F D+
Sbjct: 69  SAILEMHEEGKEKVKKMLKDGEGKLTLCYE---WFWTSDDIDEPILNEDFIGISACFADE 125

Query: 487 SWKPRNWVLHFQHLWDW-EDDFISEAILKTLKDWEIEEKVSTFTSSSLXXXXXXXXXXXV 311
           +WK + W+L +         D   ++I   + D+EIE KVST    +             
Sbjct: 126 NWKMKKWILGYHPRASLCLKDIYVDSIKNVILDYEIESKVSTLLMPNYGDLGVKAFDDFR 185

Query: 310 KSQIQTVKNLQLNGQLFRINCCAAMFNQMANDAFKEISD-IITKVSLLCYWKS--PPLWC 140
           K   +  KNL ++ ++F I CC+ +F  M +D FK+I+  ++ +V LL  W    P  W 
Sbjct: 186 KWIEEKGKNL-IDSRVFLIYCCSDIFRLMVDDMFKDINIWLMGRVRLLVGWGRMVPTNWD 244

Query: 139 LTTYKLKMALEQESMGEYSSDKVSDFYDIPSCDEWKKVEVVCKL 8
           +T Y L+ A++ E+   +  ++    Y+ PS +EW K++  CKL
Sbjct: 245 VTLYNLQKAVDMEATNVFEEEEDYQDYEQPSDEEWIKIKTFCKL 288


>ref|NP_001043974.1| Os01g0698300 [Oryza sativa Japonica Group]
           gi|113533505|dbj|BAF05888.1| Os01g0698300 [Oryza sativa
           Japonica Group] gi|215713528|dbj|BAG94665.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 701

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 8/237 (3%)
 Frame = -2

Query: 865 NNSDADNESNGSYSCDKDYRSENGDEHAGIDLQK---AHRLLADLICSCEVAPLAMLDFS 695
           N +  D +S   ++  +D+  +N   H   +L +   AH ++        V  +    F 
Sbjct: 102 NKTSTDGQSGDGHASGEDH--DNDGTHFDQELSRRDLAHMIVQHGYRFSIVDDVGFQKFV 159

Query: 694 NQLNP-FVKLDYDTVKANCLKIYEEEKVKVKNIFRNMDGQISLSVDVLRYYRCSGNYDKF 518
             L P F  + Y+TV+A+ + IYE EK+K+++    +  ++S+SVD+ R    S     F
Sbjct: 160 KNLQPRFRMVSYETVRADSMTIYESEKLKLQDALLKIPCRLSISVDMWR----SNTQMDF 215

Query: 517 MCLSAHFID---DSWKPRNWVLHFQHL-WDWEDDFISEAILKTLKDWEIEEKVSTFTSSS 350
           +CL+ H+ID   D WK R  +L+F H+   + DD I+  IL+ L++W I+ K++     +
Sbjct: 216 LCLTCHYIDHANDEWKVRKKILNFVHVEAPFTDDQIASLILEKLREWGIDRKLAAIVLDN 275

Query: 349 LXXXXXXXXXXXVKSQIQTVKNLQLNGQLFRINCCAAMFNQMANDAFKEISDIITKV 179
                       V   +Q  + L LNG LF++  CA + N    ++ ++ SDIIT+V
Sbjct: 276 CASGEIVARELLV--VLQPRRLLLLNGNLFQVRSCAHILNLTVQESLEQTSDIITRV 330


>gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsis thaliana]
          Length = 676

 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 83/330 (25%), Positives = 151/330 (45%), Gaps = 36/330 (10%)
 Frame = -2

Query: 898  GDAAEGSIQRRNNSDADNESNGSYSCDKDYRSENGDEHAGIDLQKAHRLLADLICSCEVA 719
            G   E + +R  + +  +  N  Y  +K+   +      G+D ++    LA +I      
Sbjct: 91   GKKKELANERIKDEEVLSVVNVRYEHEKEEHEDVNVVSMGLDQRRCRFDLARMII-LHGY 149

Query: 718  PLAMLD------FSNQLNPFVKL-DYDTVKANCLKIYEEEKVKVKNIFRNMDGQISLSVD 560
            PL+M++      F   L P  +L  ++ V+++C++IY +EK K+      + G+IS+SVD
Sbjct: 150  PLSMVEDVGFRMFIGNLQPLFELVAFERVESDCMEIYAKEKHKIFEALDKLPGKISISVD 209

Query: 559  VLRYYRCSGNYDKFMCLSAHFIDDSWKPRNWVLHFQHL-WDWEDDFISEAILKTLKDWEI 383
            V   +  SG+ D+F+CL+AH+ID+ W+ +  VL+F  +      + ++E I+  L +W+I
Sbjct: 210  V---WSGSGDSDEFLCLAAHYIDEGWELKKRVLNFFMVDPSHSGEMLAEVIMTCLMEWDI 266

Query: 382  EEKVSTFTSSSLXXXXXXXXXXXVKSQIQTVKNLQLNGQLFRINCCAAMFNQMANDAFKE 203
            + K+ +  SS             ++ ++   K L   GQLF ++C   + N+M  D+ + 
Sbjct: 267  DRKLFSMASSH-APPFSENVASKIRDRLSQNKFLYCYGQLFDVSCGVNVINEMVQDSLEA 325

Query: 202  ISDIITKV-SLLCYWKS---------------------------PPLWCLTTYKLKMALE 107
              D I  +   + Y KS                           P  W  T   L+ ALE
Sbjct: 326  CCDTINIIRESIRYVKSSESIQDRFNQWIVETGAVSERNLCIDDPMRWDSTCTMLENALE 385

Query: 106  QESMGEYSSDKVSDFYDIPSCDEWKKVEVV 17
            Q+S     ++   D    PS  EW+++  +
Sbjct: 386  QKSAFSLMNEHDPDSVLCPSDLEWERLGTI 415


>gb|EEC71336.1| hypothetical protein OsI_03395 [Oryza sativa Indica Group]
          Length = 661

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
 Frame = -2

Query: 700 FSNQLNP-FVKLDYDTVKANCLKIYEEEKVKVKNIFRNMDGQISLSVDVLRYYRCSGNYD 524
           F   L P F  + Y+TV+A+ + IYE EK+K+++    +  ++S+SVD+ R    S    
Sbjct: 118 FVKNLQPQFRMVSYETVRADSMTIYESEKLKLQDALLKIPCRLSISVDMWR----SNTQM 173

Query: 523 KFMCLSAHFID---DSWKPRNWVLHFQHL-WDWEDDFISEAILKTLKDWEIEEKVSTFTS 356
            F+CL+ H+ID   D WK R  +L+F H+   + DD I+  IL+ L++W I+ K++    
Sbjct: 174 DFLCLTCHYIDHANDEWKVRKKILNFVHVEAPFTDDQIASLILEKLREWGIDRKLAAIVL 233

Query: 355 SSLXXXXXXXXXXXVKSQIQTVKNLQLNGQLFRINCCAAMFNQMANDAFKEISDIITKV 179
            +            V   +Q  + L LNG LF++  CA + N    ++ ++ SDIIT+V
Sbjct: 234 DNCASGEIVARELLV--VLQPRRLLLLNGNLFQVRSCAHILNLTVQESLEQTSDIITRV 290


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