BLASTX nr result

ID: Panax21_contig00028474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028474
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27748.3| unnamed protein product [Vitis vinifera]              235   4e-60
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   231   5e-59
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   215   5e-54
ref|XP_003533804.1| PREDICTED: putative uncharacterized protein ...   207   8e-52
ref|XP_003547526.1| PREDICTED: uncharacterized protein LOC100803...   206   2e-51

>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  235 bits (600), Expect = 4e-60
 Identities = 103/148 (69%), Positives = 119/148 (80%), Gaps = 2/148 (1%)
 Frame = +3

Query: 3   RSILPPQVFDRWGDALCEAMILASHKFYCPFKDCSALLIEDDDCNGSIMESECPVCRRLF 182
           R ILP  VFDRWG+ALCEA+IL S KFYCP+KDCSALLI D+     I ESECP CRRLF
Sbjct: 184 RPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLIRDE--GEVIKESECPNCRRLF 241

Query: 183 CARCNVPWHSGIECGEFQKLHKDEREREDIMLMQLAKNNKWIRCPQCKFYVEKSQGCLFM 362
           CA+C VPWHSGI+CGEFQKL+KDER REDI++M LAK N W RCP+CKFYVEKS GC+++
Sbjct: 242 CAQCEVPWHSGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYI 301

Query: 363 KCRCGYTFCYNCGAPLK--DHYCTKCKH 440
           +CRCG+ FCYNCGAP     H C  C+H
Sbjct: 302 RCRCGFAFCYNCGAPSSTISHICPHCRH 329


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  231 bits (590), Expect = 5e-59
 Identities = 102/146 (69%), Positives = 117/146 (80%), Gaps = 2/146 (1%)
 Frame = +3

Query: 3   RSILPPQVFDRWGDALCEAMILASHKFYCPFKDCSALLIEDDDCNGSIMESECPVCRRLF 182
           R ILP  VFDRWG+ALCEA+IL S KFYCP+KDCSALLI D+     I ESECP CRRLF
Sbjct: 184 RPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLIRDE--GEVIKESECPNCRRLF 241

Query: 183 CARCNVPWHSGIECGEFQKLHKDEREREDIMLMQLAKNNKWIRCPQCKFYVEKSQGCLFM 362
           CA+C VPWHSGI+CGEFQKL+KDER REDI++M LAK N W RCP+CKFYVEKS GC+++
Sbjct: 242 CAQCEVPWHSGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYI 301

Query: 363 KCRCGYTFCYNCGAPLK--DHYCTKC 434
           +CRCG+ FCYNCGAP     H C  C
Sbjct: 302 RCRCGFAFCYNCGAPSSTISHICPHC 327


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  215 bits (547), Expect = 5e-54
 Identities = 95/149 (63%), Positives = 116/149 (77%), Gaps = 4/149 (2%)
 Frame = +3

Query: 3   RSILPPQVFDRWGDALCEAMILASHKFYCPFKDCSALLIEDDDCNGSIMESECPVCRRLF 182
           RS+LP  VFDRWG+ALCEA+IL S KFYCPFKDCSA+LI+D +    + ESECP C R+F
Sbjct: 159 RSVLPENVFDRWGNALCEAVILGSQKFYCPFKDCSAMLIDDGE--EVVRESECPNCWRMF 216

Query: 183 CARCNVPWHSGIECGEFQKLHKDEREREDIMLMQLAKNNKWIRCPQCKFYVEKSQGCLFM 362
           CA+C VPWHS I C E++ LHKDERER+DI+LM LAKN  W RCP+C+ +VEK +GC +M
Sbjct: 217 CAQCKVPWHSQISCEEYKMLHKDERERDDILLMNLAKNKNWRRCPKCRIFVEKIEGCRYM 276

Query: 363 KCRCGYTFCYNCGA----PLKDHYCTKCK 437
           KCRCG  FCY+CG+    P+  HYC KCK
Sbjct: 277 KCRCGTQFCYSCGSTDLNPV-THYCYKCK 304


>ref|XP_003533804.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Glycine max]
          Length = 333

 Score =  207 bits (528), Expect = 8e-52
 Identities = 91/146 (62%), Positives = 109/146 (74%), Gaps = 2/146 (1%)
 Frame = +3

Query: 3   RSILPPQVFDRWGDALCEAMILASHKFYCPFKDCSALLIEDDDCNGSIMESECPVCRRLF 182
           R IL P+VFDRWG ALCEA+I A  KFYCPF DCS +LI   + N +I E+ECP CRRLF
Sbjct: 187 REILAPRVFDRWGKALCEAVIAAEEKFYCPFADCSVMLIRGIEEN-NIREAECPNCRRLF 245

Query: 183 CARCNVPWHSGIECGEFQKLHKDEREREDIMLMQLAKNNKWIRCPQCKFYVEKSQGCLFM 362
           CA+C VPWH  + C +FQKL+ DER++EDIMLM LA   +W RCP+C+FYV KS GC++M
Sbjct: 246 CAQCRVPWHDNMPCEDFQKLNADERDKEDIMLMNLANQMQWKRCPRCRFYVAKSDGCMYM 305

Query: 363 KCRCGYTFCYNCGAP--LKDHYCTKC 434
           KCRCG  FCYNCGAP     H C+ C
Sbjct: 306 KCRCGNAFCYNCGAPNLTSSHSCSYC 331


>ref|XP_003547526.1| PREDICTED: uncharacterized protein LOC100803898 [Glycine max]
          Length = 685

 Score =  206 bits (525), Expect = 2e-51
 Identities = 90/136 (66%), Positives = 106/136 (77%)
 Frame = +3

Query: 3   RSILPPQVFDRWGDALCEAMILASHKFYCPFKDCSALLIEDDDCNGSIMESECPVCRRLF 182
           R IL P+VFDRWG+ALCEA+I A  KFYCPF DCSA+LI   + +  I E ECP CRRLF
Sbjct: 187 REILSPRVFDRWGNALCEAVIDAEEKFYCPFADCSAMLIRASE-DADIRECECPNCRRLF 245

Query: 183 CARCNVPWHSGIECGEFQKLHKDEREREDIMLMQLAKNNKWIRCPQCKFYVEKSQGCLFM 362
           CA C VPWH  I C EFQKL+ +EREREDIMLM LAK  +W RCP C+FYV KS+GC++M
Sbjct: 246 CALCRVPWHENIPCEEFQKLNAEEREREDIMLMSLAKQMQWKRCPHCRFYVAKSEGCMYM 305

Query: 363 KCRCGYTFCYNCGAPL 410
           +CRCG +FCY CGAP+
Sbjct: 306 RCRCGNSFCYKCGAPI 321



 Score =  110 bits (275), Expect = 2e-22
 Identities = 49/82 (59%), Positives = 62/82 (75%)
 Frame = +3

Query: 42  DALCEAMILASHKFYCPFKDCSALLIEDDDCNGSIMESECPVCRRLFCARCNVPWHSGIE 221
           + LC+++I    KFYCPFKDCSAL + D + N  I +SECP+CRRLFCA+C  PW+ GI 
Sbjct: 603 EVLCKSLIPEKDKFYCPFKDCSALFVRDTEDN-DITQSECPICRRLFCAQCKAPWNQGIR 661

Query: 222 CGEFQKLHKDEREREDIMLMQL 287
             EFQKL K+E+ER+DIMLM L
Sbjct: 662 YKEFQKLKKNEKERQDIMLMIL 683


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