BLASTX nr result

ID: Panax21_contig00028460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028460
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29258.3| unnamed protein product [Vitis vinifera]              138   5e-47
ref|XP_002534741.1| conserved hypothetical protein [Ricinus comm...   127   8e-43
ref|XP_003545805.1| PREDICTED: ubiquitin thioesterase otubain-li...   132   1e-42
ref|XP_004152159.1| PREDICTED: ubiquitin thioesterase otubain-li...   128   9e-42
gb|ACJ84270.1| unknown [Medicago truncatula] gi|388493334|gb|AFK...   129   3e-41

>emb|CBI29258.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  138 bits (348), Expect(2) = 5e-47
 Identities = 76/130 (58%), Positives = 84/130 (64%)
 Frame = +3

Query: 15  SEVDDWENIKDNDIMQQQSAIRAEEAGKFPFVGDKXXXXXXXXXXXXXXXXXXXXXXXXX 194
           SEVD WENI+D+DIMQQQSAIRAEEA K PF+GDK                         
Sbjct: 22  SEVDAWENIRDDDIMQQQSAIRAEEAEKVPFIGDK------------------------- 56

Query: 195 XXXXXXXXXXXXXEPLSSLAAEYQSGSSIMLEKIKVLNEQYAAIRRTRGDGNCFFRSFMF 374
                        EPLS LAAEY+SGS I+L+KIKVL E+Y +IRRTRGDGNCFFR FMF
Sbjct: 57  -------------EPLSVLAAEYESGSPILLKKIKVLGEKYGSIRRTRGDGNCFFRGFMF 103

Query: 375 SYLEHILESQ 404
           SYLEHILESQ
Sbjct: 104 SYLEHILESQ 113



 Score = 75.1 bits (183), Expect(2) = 5e-47
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = +1

Query: 454 EHILESQDLAEVDRITANVEKCKKTLQNLGYADFTFEDFFS 576
           EHILESQD AEVDR+T NVEKC++TLQ LGYADFTFEDFF+
Sbjct: 107 EHILESQDQAEVDRVTTNVEKCRETLQALGYADFTFEDFFA 147


>ref|XP_002534741.1| conserved hypothetical protein [Ricinus communis]
           gi|223524648|gb|EEF27640.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 304

 Score =  127 bits (320), Expect(2) = 8e-43
 Identities = 70/127 (55%), Positives = 78/127 (61%)
 Frame = +3

Query: 24  DDWENIKDNDIMQQQSAIRAEEAGKFPFVGDKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 203
           +DW N  D DIMQ  S+IR+E++ K PF+GDK                            
Sbjct: 26  EDWTNFGDEDIMQHHSSIRSEQSDKVPFLGDK---------------------------- 57

Query: 204 XXXXXXXXXXEPLSSLAAEYQSGSSIMLEKIKVLNEQYAAIRRTRGDGNCFFRSFMFSYL 383
                     EPLS+LAAEYQSGS I+LEKIKVL EQY AIRRTRGDGNCFFRSFMFSYL
Sbjct: 58  ----------EPLSALAAEYQSGSPILLEKIKVLGEQYDAIRRTRGDGNCFFRSFMFSYL 107

Query: 384 EHILESQ 404
           EHILESQ
Sbjct: 108 EHILESQ 114



 Score = 71.6 bits (174), Expect(2) = 8e-43
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +1

Query: 454 EHILESQDLAEVDRITANVEKCKKTLQNLGYADFTFEDFFS 576
           EHILESQD +EVDRI  NVE+C+KTLQ+LGY DFTFEDFF+
Sbjct: 108 EHILESQDKSEVDRIKVNVEECRKTLQSLGYVDFTFEDFFA 148


>ref|XP_003545805.1| PREDICTED: ubiquitin thioesterase otubain-like [Glycine max]
          Length = 301

 Score =  132 bits (333), Expect(2) = 1e-42
 Identities = 74/130 (56%), Positives = 81/130 (62%)
 Frame = +3

Query: 15  SEVDDWENIKDNDIMQQQSAIRAEEAGKFPFVGDKXXXXXXXXXXXXXXXXXXXXXXXXX 194
           SE+D W N  D+DIMQQQ  I+AEEA K PFVGDK                         
Sbjct: 21  SEIDGWTNFGDDDIMQQQYTIQAEEAKKVPFVGDK------------------------- 55

Query: 195 XXXXXXXXXXXXXEPLSSLAAEYQSGSSIMLEKIKVLNEQYAAIRRTRGDGNCFFRSFMF 374
                        EPLSSLAAEY+ GS I+LEKIKVL+EQYAAIRRTRGDGNCFFRSFMF
Sbjct: 56  -------------EPLSSLAAEYKLGSPILLEKIKVLDEQYAAIRRTRGDGNCFFRSFMF 102

Query: 375 SYLEHILESQ 404
           SYLEHI+E Q
Sbjct: 103 SYLEHIMECQ 112



 Score = 65.9 bits (159), Expect(2) = 1e-42
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +1

Query: 454 EHILESQDLAEVDRITANVEKCKKTLQNLGYADFTFEDFFS 576
           EHI+E QD AE+DRI ANVEK +K LQ LGYAD TFEDFF+
Sbjct: 106 EHIMECQDQAEIDRIQANVEKSRKALQTLGYADLTFEDFFA 146


>ref|XP_004152159.1| PREDICTED: ubiquitin thioesterase otubain-like [Cucumis sativus]
           gi|449523221|ref|XP_004168622.1| PREDICTED: ubiquitin
           thioesterase otubain-like [Cucumis sativus]
          Length = 302

 Score =  128 bits (321), Expect(2) = 9e-42
 Identities = 73/132 (55%), Positives = 81/132 (61%)
 Frame = +3

Query: 9   KASEVDDWENIKDNDIMQQQSAIRAEEAGKFPFVGDKXXXXXXXXXXXXXXXXXXXXXXX 188
           + SE D W N+ D+DIM Q+SAI  +EA K PFVGDK                       
Sbjct: 20  QTSEYDSWGNLGDDDIMLQKSAIFVQEAEKVPFVGDK----------------------- 56

Query: 189 XXXXXXXXXXXXXXXEPLSSLAAEYQSGSSIMLEKIKVLNEQYAAIRRTRGDGNCFFRSF 368
                          EPLSSL AEY+SGS I+LEKIKVL+ QYAAIRRTRGDGNCFFRSF
Sbjct: 57  ---------------EPLSSLEAEYKSGSPILLEKIKVLSGQYAAIRRTRGDGNCFFRSF 101

Query: 369 MFSYLEHILESQ 404
           MFSYLEHILESQ
Sbjct: 102 MFSYLEHILESQ 113



 Score = 67.8 bits (164), Expect(2) = 9e-42
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +1

Query: 454 EHILESQDLAEVDRITANVEKCKKTLQNLGYADFTFEDFFS 576
           EHILESQD  EVDRI  NVE C+KTL++LGY +FTFEDFF+
Sbjct: 107 EHILESQDKTEVDRIKTNVENCRKTLRSLGYTEFTFEDFFA 147


>gb|ACJ84270.1| unknown [Medicago truncatula] gi|388493334|gb|AFK34733.1| unknown
           [Medicago truncatula]
          Length = 298

 Score =  129 bits (325), Expect(2) = 3e-41
 Identities = 71/125 (56%), Positives = 80/125 (64%)
 Frame = +3

Query: 30  WENIKDNDIMQQQSAIRAEEAGKFPFVGDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 209
           W N +D+D+MQQQS+I+ +EA KFPFVGDK                              
Sbjct: 23  WGNFEDDDVMQQQSSIQDDEAKKFPFVGDK------------------------------ 52

Query: 210 XXXXXXXXEPLSSLAAEYQSGSSIMLEKIKVLNEQYAAIRRTRGDGNCFFRSFMFSYLEH 389
                   EPLSSLAAEYQSGS I+LEKIKVL+ QYAAIRRTRGDGNCFFR FMFSYLEH
Sbjct: 53  --------EPLSSLAAEYQSGSPILLEKIKVLDGQYAAIRRTRGDGNCFFRGFMFSYLEH 104

Query: 390 ILESQ 404
           ILE+Q
Sbjct: 105 ILEAQ 109



 Score = 64.7 bits (156), Expect(2) = 3e-41
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +1

Query: 454 EHILESQDLAEVDRITANVEKCKKTLQNLGYADFTFEDFFS 576
           EHILE+QD AE+DRI ANVE+ +K LQ LGYA+ TFEDFF+
Sbjct: 103 EHILEAQDSAEIDRIKANVERSRKALQTLGYAELTFEDFFT 143


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