BLASTX nr result

ID: Panax21_contig00028456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028456
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16496.3| unnamed protein product [Vitis vinifera]              525   e-147
ref|XP_002283484.1| PREDICTED: F-box/kelch-repeat protein At1g55...   525   e-147
ref|XP_002527061.1| Protein AFR, putative [Ricinus communis] gi|...   514   e-144
ref|XP_002304010.1| predicted protein [Populus trichocarpa] gi|2...   508   e-142
ref|XP_004142161.1| PREDICTED: F-box/kelch-repeat protein At1g55...   506   e-141

>emb|CBI16496.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  525 bits (1351), Expect = e-147
 Identities = 248/279 (88%), Positives = 260/279 (93%)
 Frame = -2

Query: 839 RGFRVQAPLVDSVSCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPHAHKSKHSRRERTR 660
           RGFRVQAPLVDSVSCYCKVD+GLKTVAGARKFVPGSKLCIQPDINPHAHKSK+SRRERTR
Sbjct: 13  RGFRVQAPLVDSVSCYCKVDSGLKTVAGARKFVPGSKLCIQPDINPHAHKSKNSRRERTR 72

Query: 659 IQXXXXXXXXXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSLRKSLGMVEEWVY 480
            Q          LAIACLIRVPRVEH KLRLVCKRW+RLL+GNFFYSLRKSLGM EEWVY
Sbjct: 73  FQPPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWHRLLSGNFFYSLRKSLGMAEEWVY 132

Query: 479 VVKRDRDRRISWHAFDPTYQLWQALPPVPGEYSEALGFGCAVLSGCHLYLFGGKDPIKGS 300
           V+KRDRD RISWHAFDPTYQLWQ LPPVP EYSEALGFGCAVLSGC+LYLFGGKDP+K S
Sbjct: 133 VIKRDRDGRISWHAFDPTYQLWQPLPPVPVEYSEALGFGCAVLSGCNLYLFGGKDPMKRS 192

Query: 299 MRRVIFYSARTNKWHRAPNMLRKRHFFGSCVINNCLYVAGGECEGIQRILRSVEVYDPNR 120
           +RRVIFYSARTNKWHRAP+MLRKRHFFGSCVINNCLYVAGGECEGIQR LRS EVYDPNR
Sbjct: 193 LRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAEVYDPNR 252

Query: 119 NRWSFVSDMSTAMVPFIGVVYNGKWFLKGLGSHREVLSE 3
           NRWSF+SDMSTAMVPFIGV+YNGKWFLKGLGSHREV+SE
Sbjct: 253 NRWSFISDMSTAMVPFIGVIYNGKWFLKGLGSHREVMSE 291


>ref|XP_002283484.1| PREDICTED: F-box/kelch-repeat protein At1g55270 [Vitis vinifera]
           gi|147841213|emb|CAN64353.1| hypothetical protein
           VITISV_013831 [Vitis vinifera]
          Length = 437

 Score =  525 bits (1351), Expect = e-147
 Identities = 248/279 (88%), Positives = 260/279 (93%)
 Frame = -2

Query: 839 RGFRVQAPLVDSVSCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPHAHKSKHSRRERTR 660
           RGFRVQAPLVDSVSCYCKVD+GLKTVAGARKFVPGSKLCIQPDINPHAHKSK+SRRERTR
Sbjct: 13  RGFRVQAPLVDSVSCYCKVDSGLKTVAGARKFVPGSKLCIQPDINPHAHKSKNSRRERTR 72

Query: 659 IQXXXXXXXXXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSLRKSLGMVEEWVY 480
            Q          LAIACLIRVPRVEH KLRLVCKRW+RLL+GNFFYSLRKSLGM EEWVY
Sbjct: 73  FQPPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWHRLLSGNFFYSLRKSLGMAEEWVY 132

Query: 479 VVKRDRDRRISWHAFDPTYQLWQALPPVPGEYSEALGFGCAVLSGCHLYLFGGKDPIKGS 300
           V+KRDRD RISWHAFDPTYQLWQ LPPVP EYSEALGFGCAVLSGC+LYLFGGKDP+K S
Sbjct: 133 VIKRDRDGRISWHAFDPTYQLWQPLPPVPVEYSEALGFGCAVLSGCNLYLFGGKDPMKRS 192

Query: 299 MRRVIFYSARTNKWHRAPNMLRKRHFFGSCVINNCLYVAGGECEGIQRILRSVEVYDPNR 120
           +RRVIFYSARTNKWHRAP+MLRKRHFFGSCVINNCLYVAGGECEGIQR LRS EVYDPNR
Sbjct: 193 LRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAEVYDPNR 252

Query: 119 NRWSFVSDMSTAMVPFIGVVYNGKWFLKGLGSHREVLSE 3
           NRWSF+SDMSTAMVPFIGV+YNGKWFLKGLGSHREV+SE
Sbjct: 253 NRWSFISDMSTAMVPFIGVIYNGKWFLKGLGSHREVMSE 291


>ref|XP_002527061.1| Protein AFR, putative [Ricinus communis]
           gi|223533566|gb|EEF35305.1| Protein AFR, putative
           [Ricinus communis]
          Length = 437

 Score =  514 bits (1325), Expect = e-144
 Identities = 244/279 (87%), Positives = 257/279 (92%)
 Frame = -2

Query: 839 RGFRVQAPLVDSVSCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPHAHKSKHSRRERTR 660
           RGFRVQAPLVDSVSCYCKVD+GLKTVA ARKFVPGSKLCIQPDINP+AHKSK+ RRERTR
Sbjct: 13  RGFRVQAPLVDSVSCYCKVDSGLKTVAEARKFVPGSKLCIQPDINPNAHKSKNLRRERTR 72

Query: 659 IQXXXXXXXXXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSLRKSLGMVEEWVY 480
           +Q          LAIACLIRVPR EH KLRLVCKRW RLLAGNFFYSLRKSLGM EEWVY
Sbjct: 73  VQPPLLPGLPDDLAIACLIRVPRAEHRKLRLVCKRWYRLLAGNFFYSLRKSLGMAEEWVY 132

Query: 479 VVKRDRDRRISWHAFDPTYQLWQALPPVPGEYSEALGFGCAVLSGCHLYLFGGKDPIKGS 300
           V+KRDRD +ISW+AFDP YQLWQ LPPVP EYSEALGFGCAVLSGCHLYLFGGKDP++GS
Sbjct: 133 VIKRDRDGKISWNAFDPIYQLWQPLPPVPREYSEALGFGCAVLSGCHLYLFGGKDPLRGS 192

Query: 299 MRRVIFYSARTNKWHRAPNMLRKRHFFGSCVINNCLYVAGGECEGIQRILRSVEVYDPNR 120
           MRRVIFYSARTNKWHRAP+MLRKRHFFGSCVINNCLYVAGGECEGIQR LRS EVYDPN+
Sbjct: 193 MRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAEVYDPNK 252

Query: 119 NRWSFVSDMSTAMVPFIGVVYNGKWFLKGLGSHREVLSE 3
           NRWSF+SDMSTAMVPFIGVVY+GKWFLKGLGSHREVLSE
Sbjct: 253 NRWSFISDMSTAMVPFIGVVYDGKWFLKGLGSHREVLSE 291


>ref|XP_002304010.1| predicted protein [Populus trichocarpa] gi|222841442|gb|EEE78989.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  508 bits (1307), Expect = e-142
 Identities = 240/279 (86%), Positives = 255/279 (91%)
 Frame = -2

Query: 839 RGFRVQAPLVDSVSCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPHAHKSKHSRRERTR 660
           RGFRVQAPLVDSVSCYCKVD+GLKTVA ARKFVPGSKLCIQPDINP+AHKSK SRRERTR
Sbjct: 11  RGFRVQAPLVDSVSCYCKVDSGLKTVAEARKFVPGSKLCIQPDINPNAHKSKTSRRERTR 70

Query: 659 IQXXXXXXXXXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSLRKSLGMVEEWVY 480
           +Q          LAIACLIRVPR EH KLRLVCKRW RLLAGNFFYSLRKSLGM EEWVY
Sbjct: 71  VQPPLLPGLPDDLAIACLIRVPRAEHRKLRLVCKRWYRLLAGNFFYSLRKSLGMAEEWVY 130

Query: 479 VVKRDRDRRISWHAFDPTYQLWQALPPVPGEYSEALGFGCAVLSGCHLYLFGGKDPIKGS 300
           V+KRDRD +ISW+AFDP +Q+WQ LPPVP EYS ALGFGCAVLS CHLYLFGGKDP++GS
Sbjct: 131 VIKRDRDGKISWNAFDPVHQIWQPLPPVPREYSGALGFGCAVLSSCHLYLFGGKDPLRGS 190

Query: 299 MRRVIFYSARTNKWHRAPNMLRKRHFFGSCVINNCLYVAGGECEGIQRILRSVEVYDPNR 120
           MRRVIFYSARTNKWHRAP+MLRKRHFFGSCVINNCLYVAGGECEGIQR LRS EVYDPN+
Sbjct: 191 MRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLRSAEVYDPNK 250

Query: 119 NRWSFVSDMSTAMVPFIGVVYNGKWFLKGLGSHREVLSE 3
           NRWSF+SDMSTAMVPFIGVVY+GKWFLKGLGSHREV+SE
Sbjct: 251 NRWSFISDMSTAMVPFIGVVYDGKWFLKGLGSHREVMSE 289


>ref|XP_004142161.1| PREDICTED: F-box/kelch-repeat protein At1g55270-like [Cucumis
           sativus] gi|449533335|ref|XP_004173631.1| PREDICTED:
           F-box/kelch-repeat protein At1g55270-like [Cucumis
           sativus]
          Length = 437

 Score =  506 bits (1304), Expect = e-141
 Identities = 238/279 (85%), Positives = 256/279 (91%)
 Frame = -2

Query: 839 RGFRVQAPLVDSVSCYCKVDAGLKTVAGARKFVPGSKLCIQPDINPHAHKSKHSRRERTR 660
           RG R+QAPLVDSVSCYCKVD+GLKTV GARKFVPGSK+CIQPDINP+AH+SK SRRERTR
Sbjct: 13  RGIRIQAPLVDSVSCYCKVDSGLKTVVGARKFVPGSKICIQPDINPNAHRSKASRRERTR 72

Query: 659 IQXXXXXXXXXXLAIACLIRVPRVEHNKLRLVCKRWNRLLAGNFFYSLRKSLGMVEEWVY 480
           +Q          LAIACLIRVPRVEH KLRLVCKRW RLL GNF+YSLRKSLGM EEWVY
Sbjct: 73  VQPPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLMGNFYYSLRKSLGMAEEWVY 132

Query: 479 VVKRDRDRRISWHAFDPTYQLWQALPPVPGEYSEALGFGCAVLSGCHLYLFGGKDPIKGS 300
           V+KR+RDRRISWHAFDPTYQLWQ+LPPVP EYSEALGFGCAVLSGCHLYLFGGKDPIKGS
Sbjct: 133 VIKRERDRRISWHAFDPTYQLWQSLPPVPVEYSEALGFGCAVLSGCHLYLFGGKDPIKGS 192

Query: 299 MRRVIFYSARTNKWHRAPNMLRKRHFFGSCVINNCLYVAGGECEGIQRILRSVEVYDPNR 120
           MRRVIFYSARTNKWHRAP+MLRKRH FGSCVINNCLYVAGGECEGIQR LRS EVYDPN+
Sbjct: 193 MRRVIFYSARTNKWHRAPDMLRKRHCFGSCVINNCLYVAGGECEGIQRTLRSAEVYDPNK 252

Query: 119 NRWSFVSDMSTAMVPFIGVVYNGKWFLKGLGSHREVLSE 3
           NRWSF+SDMS+AMVPFIGVV++G WFLKGLG+ REV+SE
Sbjct: 253 NRWSFISDMSSAMVPFIGVVHDGLWFLKGLGTRREVMSE 291


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