BLASTX nr result

ID: Panax21_contig00028452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028452
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887590.1| expressed protein [Arabidopsis lyrata subsp....    74   2e-11
ref|XP_003544337.1| PREDICTED: uncharacterized protein LOC100799...    74   2e-11
ref|NP_001117603.1| conserved peptide upstream open reading fram...    72   8e-11
ref|NP_001118342.1| uncharacterized protein [Arabidopsis thalian...    64   3e-08
ref|NP_001119115.1| uncharacerized protein [Arabidopsis thaliana...    60   3e-07

>ref|XP_002887590.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333431|gb|EFH63849.1| expressed protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 53

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = -2

Query: 336 FMSPVLSEILLSGYTINSSLHRRTHLVQSLSVVFLYWFYVFS 211
           FMSPV+SEIL SG TI+SSL RRTHLVQS SVVFLYWFYVFS
Sbjct: 12  FMSPVISEILRSGLTIDSSLRRRTHLVQSFSVVFLYWFYVFS 53


>ref|XP_003544337.1| PREDICTED: uncharacterized protein LOC100799960 [Glycine max]
           gi|356564302|ref|XP_003550394.1| PREDICTED:
           uncharacterized protein LOC100799844 [Glycine max]
          Length = 41

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/41 (87%), Positives = 37/41 (90%)
 Frame = -2

Query: 333 MSPVLSEILLSGYTINSSLHRRTHLVQSLSVVFLYWFYVFS 211
           MSPVLSEIL SG+ INSSL RRTHLVQS SVVFLYWFYVFS
Sbjct: 1   MSPVLSEILRSGFMINSSLRRRTHLVQSFSVVFLYWFYVFS 41


>ref|NP_001117603.1| conserved peptide upstream open reading frame 5 [Arabidopsis
           thaliana] gi|332197591|gb|AEE35712.1| conserved peptide
           upstream open reading frame 5 [Arabidopsis thaliana]
          Length = 41

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = -2

Query: 333 MSPVLSEILLSGYTINSSLHRRTHLVQSLSVVFLYWFYVFS 211
           MSPV+SEIL SG TI+SSL RRTHLVQS SVVFLYWFYVFS
Sbjct: 1   MSPVISEILRSGLTIDSSLRRRTHLVQSFSVVFLYWFYVFS 41


>ref|NP_001118342.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330251639|gb|AEC06733.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 41

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/38 (78%), Positives = 33/38 (86%)
 Frame = -2

Query: 333 MSPVLSEILLSGYTINSSLHRRTHLVQSLSVVFLYWFY 220
           M+PVL EILLSG T+ S+L RRTHLVQS SVVFLYWFY
Sbjct: 1   MTPVLCEILLSGLTVKSALCRRTHLVQSFSVVFLYWFY 38


>ref|NP_001119115.1| uncharacerized protein [Arabidopsis thaliana]
           gi|332660996|gb|AEE86396.1| uncharacerized protein
           [Arabidopsis thaliana]
          Length = 42

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/42 (69%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
 Frame = -2

Query: 333 MSPV-LSEILLSGYTINSSLHRRTHLVQSLSVVFLYWFYVFS 211
           MSP+ LSEI LSG+ +NS++ RRTHLVQS SVVFLYW Y  S
Sbjct: 1   MSPIILSEIFLSGFMLNSTIRRRTHLVQSFSVVFLYWLYYVS 42


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