BLASTX nr result

ID: Panax21_contig00028403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028403
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]   147   1e-33
ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...   147   2e-33
ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
emb|CBI34670.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2...   105   7e-21

>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score =  147 bits (371), Expect = 1e-33
 Identities = 86/162 (53%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
 Frame = -3

Query: 563 IVDSLCSSDEDSSQLEQNRSSLMSLNTEXXXXXXXXXXSHEFLDLNFQP--ISERGVSSD 390
           IVDSLCSSDE+   LE+ RS + SLN++          S  F  L   P     RG SSD
Sbjct: 303 IVDSLCSSDEEDPVLEEKRSPVKSLNSDLNASSVRKPCSQVF-SLPSSPGHFLTRGGSSD 361

Query: 389 SFVQISPGLDGRENHSAENVKRQSLENSKGRCVPAVGPLRDDNRLRERNPAFTLHKSLSA 210
            F +I   LD RENHSAE+ +R S+ +SK +C   VGP  D N L ER    TL+KSLSA
Sbjct: 362 GFFEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSA 421

Query: 209 KLALPHSPSHLKNDCSNPNSPKSRFSPIRKMFDPFAKSKLQR 84
           K+ALPHSPS  ++D S   SPK+RF+PIRKMFDPF KSK QR
Sbjct: 422 KVALPHSPSQSESDYSR-TSPKARFNPIRKMFDPFTKSKSQR 462


>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score =  147 bits (370), Expect = 2e-33
 Identities = 86/162 (53%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
 Frame = -3

Query: 563 IVDSLCSSDEDSSQLEQNRSSLMSLNTEXXXXXXXXXXSHEFLDLNFQP--ISERGVSSD 390
           IVDSLCSSDE+   LE+ RS + SLN++          S  F  L   P     RG SSD
Sbjct: 124 IVDSLCSSDEEDPVLEEKRSPVKSLNSDLNASSVRKPCSQVF-SLPSSPGHFLTRGGSSD 182

Query: 389 SFVQISPGLDGRENHSAENVKRQSLENSKGRCVPAVGPLRDDNRLRERNPAFTLHKSLSA 210
            F +I   LD RENHSAE+ +R S+ +SK +C   VGP  D N L ER    TL+KSLSA
Sbjct: 183 GFSEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSA 242

Query: 209 KLALPHSPSHLKNDCSNPNSPKSRFSPIRKMFDPFAKSKLQR 84
           K+ALPHSPS  ++D S   SPK+RF+PIRKMFDPF KSK QR
Sbjct: 243 KVALPHSPSQSESDYSR-TSPKARFNPIRKMFDPFTKSKSQR 283


>ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549704|gb|EEF51192.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 736

 Score =  117 bits (294), Expect = 1e-24
 Identities = 71/160 (44%), Positives = 94/160 (58%)
 Frame = -3

Query: 563 IVDSLCSSDEDSSQLEQNRSSLMSLNTEXXXXXXXXXXSHEFLDLNFQPISERGVSSDSF 384
           IVDSLCSS+E++SQ    RSS + LN+                +   +P +E  +S D F
Sbjct: 118 IVDSLCSSNEENSQ---KRSSALCLNSNLNP------------ESTRKPCTESSLSDD-F 161

Query: 383 VQISPGLDGRENHSAENVKRQSLENSKGRCVPAVGPLRDDNRLRERNPAFTLHKSLSAKL 204
            +I P LD RE   A  V+R S+EN   R    VGP  D N L +++ A T H+S S K+
Sbjct: 162 FEICPNLDKREKQLAGTVRRDSIENPTLRSEQVVGPTNDANDLLDKDIALTFHRSHSVKV 221

Query: 203 ALPHSPSHLKNDCSNPNSPKSRFSPIRKMFDPFAKSKLQR 84
            +P+SPS  ++DCS+  S KSRFSPI+KMFDPF KSK  R
Sbjct: 222 EMPYSPSPSESDCSSKASSKSRFSPIKKMFDPFMKSKSLR 261


>emb|CBI34670.3| unnamed protein product [Vitis vinifera]
          Length = 1085

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/94 (59%), Positives = 68/94 (72%)
 Frame = -3

Query: 365 LDGRENHSAENVKRQSLENSKGRCVPAVGPLRDDNRLRERNPAFTLHKSLSAKLALPHSP 186
           +D  ENHSAE+ +R S+ +SK +C   VGP  D N L ER    TL+KSLSAK+ALPHSP
Sbjct: 687 VDSLENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSP 746

Query: 185 SHLKNDCSNPNSPKSRFSPIRKMFDPFAKSKLQR 84
           S  ++D S   SPK+RF+PIRKMFDPF KSK QR
Sbjct: 747 SQSESDYSR-TSPKARFNPIRKMFDPFTKSKSQR 779


>ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  105 bits (261), Expect = 7e-21
 Identities = 71/165 (43%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
 Frame = -3

Query: 563 IVDSLCSSDEDSSQLEQNRSSLMSLNTEXXXXXXXXXXSHEFLDLNFQPISERG-----V 399
           IVDSL   DE++ Q     SS+ S                     N  P S R       
Sbjct: 123 IVDSLHCLDEETLQKRSPASSVSS---------------------NLNPKSVRRPCIEPC 161

Query: 398 SSDSFVQISPGLDGRENHSAENVKRQSLENSKGRCVPAVGPLRDDNRLRERNPAFTLHKS 219
           SSD F +I P LD R+ HSA  V   S+ N   +C   VGPL D N L ER+ A T  KS
Sbjct: 162 SSDDFTEICPNLDKRDKHSAGIVGSDSIGNPNFKCEQVVGPLNDGNELLERDTALTFQKS 221

Query: 218 LSAKLALPHSPSHLKNDCSNPNSPKSRFSPIRKMFDPFAKSKLQR 84
           LSAK+ +P SPS   +  SN  S KSRFSP+R MFDPF KSK  R
Sbjct: 222 LSAKVEIPCSPSSSGSYLSNGASSKSRFSPMRMMFDPFTKSKSLR 266


Top