BLASTX nr result
ID: Panax21_contig00028399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00028399
(645 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus ... 81 9e-24
ref|XP_002332483.1| tir-nbs-lrr resistance protein [Populus tric... 81 1e-23
ref|XP_002316572.1| predicted protein [Populus trichocarpa] gi|2... 80 1e-22
ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cu... 80 4e-22
ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cu... 80 1e-21
>gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
Length = 1309
Score = 81.3 bits (199), Expect(3) = 9e-24
Identities = 41/94 (43%), Positives = 62/94 (65%)
Frame = +1
Query: 124 ESKKEWMDRVNGWREALKEVADLSGMVLQNVADGHESKFIQEIIKVVTAKVNRPALKIPQ 303
+S E M+RVN WR ALKEVADL+GMVL DG+E++F+Q I++ V+ K+++ +P
Sbjct: 449 KSFNEDMERVNRWRIALKEVADLAGMVL---GDGYEAQFVQSIVEKVSKKLDQKMFHLPL 505
Query: 304 FPVGLHSRTKSINLWLNDGSADIEMLVIFGMGGV 405
+G IN WL +GS D + +++G+GGV
Sbjct: 506 HFIGRDPLVNYINSWLQEGSHDAAIAILYGIGGV 539
Score = 47.4 bits (111), Expect(3) = 9e-24
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 407 LLSNILKGQKEMIYNVDEGTVKIEEAIRCNKVFXXXXXXXXXXXXXXXXGTQDFY-PGSK 583
LLS+ILK + I + DEG +KI++A+ C K G Q++ GSK
Sbjct: 577 LLSDILKKTIDEINDEDEGILKIKDALCCRKTLIVLDDVDKRDQFNKIIGMQNWLCKGSK 636
Query: 584 IIITTRNKCLLRARKIHKL 640
II+TTRNK L A I ++
Sbjct: 637 IIVTTRNKGLFSANDIERV 655
Score = 27.3 bits (59), Expect(3) = 9e-24
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 3 ILECKKISGHLVVPVFYHVEPSHV 74
I+E K+ +V+PVFY V+PS V
Sbjct: 410 IMERKRNDDCIVLPVFYDVDPSQV 433
>ref|XP_002332483.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
gi|222832734|gb|EEE71211.1| tir-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 504
Score = 81.3 bits (199), Expect(3) = 1e-23
Identities = 41/94 (43%), Positives = 62/94 (65%)
Frame = +1
Query: 124 ESKKEWMDRVNGWREALKEVADLSGMVLQNVADGHESKFIQEIIKVVTAKVNRPALKIPQ 303
+S E M+RVN WR ALKEVADL+GMVL DG+E++F+Q I++ V+ K+++ +P
Sbjct: 118 KSFNEDMERVNRWRIALKEVADLAGMVL---GDGYEAQFVQSIVEKVSKKLDQKMFHLPL 174
Query: 304 FPVGLHSRTKSINLWLNDGSADIEMLVIFGMGGV 405
+G IN WL +GS D + +++G+GGV
Sbjct: 175 HFIGRDPLVNYINSWLQEGSHDAAIAILYGIGGV 208
Score = 47.4 bits (111), Expect(3) = 1e-23
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 407 LLSNILKGQKEMIYNVDEGTVKIEEAIRCNKVFXXXXXXXXXXXXXXXXGTQDFY-PGSK 583
LLS+ILK + I + DEG +KI++A+ C K G Q++ GSK
Sbjct: 246 LLSDILKKTIDEINDEDEGILKIKDALCCRKTLIVLDDVDKRDQFNKIIGMQNWLCKGSK 305
Query: 584 IIITTRNKCLLRARKIHKL 640
II+TTRNK L A I ++
Sbjct: 306 IIVTTRNKGLFSANDIERV 324
Score = 27.3 bits (59), Expect(3) = 1e-23
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 3 ILECKKISGHLVVPVFYHVEPSHV 74
I+E K+ +V+PVFY V+PS V
Sbjct: 79 IMERKRNDDCIVLPVFYDVDPSQV 102
>ref|XP_002316572.1| predicted protein [Populus trichocarpa] gi|222859637|gb|EEE97184.1|
predicted protein [Populus trichocarpa]
Length = 435
Score = 79.7 bits (195), Expect(3) = 1e-22
Identities = 40/94 (42%), Positives = 60/94 (63%)
Frame = +1
Query: 124 ESKKEWMDRVNGWREALKEVADLSGMVLQNVADGHESKFIQEIIKVVTAKVNRPALKIPQ 303
+S E M+RVNGWR ALKEVADL+GMVL DG+E+ +Q I++ V +++ +P
Sbjct: 136 KSFNEEMERVNGWRIALKEVADLAGMVL---GDGYEAPLVQSIVEKVLKNLDKKMFHVPL 192
Query: 304 FPVGLHSRTKSINLWLNDGSADIEMLVIFGMGGV 405
+G + IN WL DGS + + +++G+GGV
Sbjct: 193 HFIGRDPLVQYINSWLQDGSHGVAIALLYGIGGV 226
Score = 45.1 bits (105), Expect(3) = 1e-22
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 407 LLSNILKGQKEMIYNVDEGTVKIEEAIRCNKVFXXXXXXXXXXXXXXXXGTQDFY-PGSK 583
LLS+ILK + I + DEG +KI++A+ C + G Q++ GSK
Sbjct: 264 LLSDILKKTVDGINDEDEGILKIKDALCCRRTLIVLDDVDKRDQFNAIIGMQNWLCKGSK 323
Query: 584 IIITTRNKCLLRARKI 631
II+TTRNK L A I
Sbjct: 324 IIVTTRNKGLFSANDI 339
Score = 27.7 bits (60), Expect(3) = 1e-22
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 3 ILECKKISGHLVVPVFYHVEPSHV 74
I+E K+ + +V+PVFY V+PS V
Sbjct: 97 IMERKRNADCIVLPVFYDVDPSQV 120
>ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
Length = 996
Score = 80.1 bits (196), Expect(3) = 4e-22
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +1
Query: 142 MDRVNGWREALKEVADLSGMVLQNVADGHESKFIQEIIKVVTAKVNRPALKIPQFPVGLH 321
+DRV WR AL E A+LSG L+N+A+GHE+KFI+ I++ V+ +VN L I +PVG+
Sbjct: 137 IDRVLKWRMALTEAANLSGWDLRNIANGHEAKFIRLIVEKVSKEVNSKYLFIALYPVGIE 196
Query: 322 SRTKSINLWLNDGSADIEMLVIFGMGGV 405
SR K + L+ GS D+ + I GMGG+
Sbjct: 197 SRLKLLLSHLHIGSNDVRFVGILGMGGL 224
Score = 39.7 bits (91), Expect(3) = 4e-22
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 407 LLSNILKGQKEMIYNVDEGTVKIEEAIRCNKVFXXXXXXXXXXXXXXXXGTQD-FYPGSK 583
LLS+I + N+D+G ++E +RC ++ T+D F GS+
Sbjct: 264 LLSSITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLSQLTALATTRDLFASGSR 323
Query: 584 IIITTRNKCLLRARKIHKL 640
IIITTR++ LL ++ ++
Sbjct: 324 IIITTRDRHLLNQLEVDEI 342
Score = 30.8 bits (68), Expect(3) = 4e-22
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 3 ILECKKISGHLVVPVFYHVEPSHV 74
I+EC++ LV P+FY+V+PS V
Sbjct: 92 IMECRRTLRQLVFPIFYNVDPSCV 115
>ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
Length = 936
Score = 80.1 bits (196), Expect(3) = 1e-21
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +1
Query: 142 MDRVNGWREALKEVADLSGMVLQNVADGHESKFIQEIIKVVTAKVNRPALKIPQFPVGLH 321
+DRV WR AL E A+LSG L+N+A+GHE+KFI+ I++ V+ +VN L I +PVG+
Sbjct: 137 IDRVLKWRMALTEAANLSGWDLRNIANGHEAKFIRLIVEKVSKEVNSKYLFIALYPVGIE 196
Query: 322 SRTKSINLWLNDGSADIEMLVIFGMGGV 405
SR K + L+ GS D+ + I GMGG+
Sbjct: 197 SRLKLLLSHLHIGSNDVRFVGILGMGGL 224
Score = 38.1 bits (87), Expect(3) = 1e-21
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 407 LLSNILKGQKEMIYNVDEGTVKIEEAIRCNKVFXXXXXXXXXXXXXXXXGTQD-FYPGSK 583
LLS+I + N+D+G ++E +RC ++ ++D F GS+
Sbjct: 264 LLSSITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLSQLTALATSRDLFASGSR 323
Query: 584 IIITTRNKCLLRARKIHKL 640
IIITTR++ LL ++ ++
Sbjct: 324 IIITTRDRHLLNQLEVDEI 342
Score = 30.8 bits (68), Expect(3) = 1e-21
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 3 ILECKKISGHLVVPVFYHVEPSHV 74
I+EC++ LV P+FY+V+PS V
Sbjct: 92 IMECRRTLRQLVFPIFYNVDPSCV 115