BLASTX nr result

ID: Panax21_contig00028364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028364
         (1364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC92796.1| SBP-box transcription factor [Betula luminifera]       411   e-112
ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like pr...   409   e-111
gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoli...   382   e-103
ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Popu...   381   e-103
gb|ADL36824.1| SPL domain class transcription factor [Malus x do...   364   2e-98

>gb|AGC92796.1| SBP-box transcription factor [Betula luminifera]
          Length = 389

 Score =  411 bits (1057), Expect = e-112
 Identities = 216/395 (54%), Positives = 269/395 (68%), Gaps = 11/395 (2%)
 Frame = -1

Query: 1244 MDWNLKIPSWDLTDFEQAAIPNIDLVNGSSSSGGQGIKM-DFSVDLKLGQVVDSGNELGD 1068
            MDW+LK  SWDLT+ EQ A PNI+ V GSSS         DFSVDLKLGQ+ +SG E  +
Sbjct: 1    MDWHLKASSWDLTELEQEAFPNIETVGGSSSLKDLRTNTGDFSVDLKLGQLGNSGPESVN 60

Query: 1067 YFKVPNVPKMALSPSGSSKRARGTNNGTQTAMCLADGCNSDLNNCREYHRRHKVCELHSK 888
             +K P V K+A SPSGSSKRAR  NNGTQ   CL DGC SDL+NCR+YHRRHKVCELHSK
Sbjct: 61   KWKEPGVSKIASSPSGSSKRARAANNGTQPVSCLVDGCTSDLSNCRDYHRRHKVCELHSK 120

Query: 887  TPQVTINGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSHAGSFFP 708
            TP+VTI G KQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLS +G+F  
Sbjct: 121  TPEVTICGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSRSGNFLS 180

Query: 707  SHQGTRLLQFSNPQVYPTTGVANPVWARIVKDQEDVQLYNHQSHLAHPHLPEKHNAF--- 537
            ++QGT+++ FS+  VYP+T V +  WA ++    D +L+N Q  L    L ++   F   
Sbjct: 181  NYQGTQVIPFSSSLVYPSTTVVSAAWAGVLNSAADARLHNQQQQL---QLIDEQKLFLRS 237

Query: 536  ---SESYCGDKRGKQLSFVHSTNLELSNQSGPESSVCQPLLINIASSGSGGAINKMFCDG 366
               + S+ G   GKQLS +   +  L NQS  E+ VC+PLL  IA + SGGA  KM+CD 
Sbjct: 238  PPSTSSFIG---GKQLSSLQGGSTTLGNQSSLEAPVCRPLLRTIALAESGGARTKMYCDR 294

Query: 365  FSTRVFHSDCAXXXXXXSPTQTSDIGLSHAVQPNSIPVAHPLDSGLNYSSLEP---ILVP 195
             +TRV  SDCA        +QTS +G +H   PN++ +  PL S L+ +SLEP   +LV 
Sbjct: 295  LTTRVEESDCALSLLSSPQSQTSRLGFTHIAHPNAVSLLQPLGSSLHGNSLEPMDSVLVS 354

Query: 194  NVSNADVHS-MGMFPMAPHAARGNETPQTLPFYWE 93
            + S+++VH+   MF M    ++ N TPQTLPF+WE
Sbjct: 355  SGSDSNVHNCQAMFHMGSDGSQANGTPQTLPFHWE 389


>ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like protein 13 [Vitis vinifera]
            gi|147837620|emb|CAN77059.1| hypothetical protein
            VITISV_022138 [Vitis vinifera]
            gi|297734432|emb|CBI15679.3| unnamed protein product
            [Vitis vinifera]
          Length = 377

 Score =  409 bits (1050), Expect = e-111
 Identities = 214/388 (55%), Positives = 260/388 (67%), Gaps = 4/388 (1%)
 Frame = -1

Query: 1244 MDWNLKIPSWDLTDFEQAAIPNIDLVNGSSSSGGQGIKMDFSVDLKLGQVVDSGNELGDY 1065
            MDWNLK PSWDLT+ E  AIPNID+V G+SSSG      DFS+DLKLGQV +  ++  D 
Sbjct: 1    MDWNLKTPSWDLTELETEAIPNIDVVGGTSSSGVHKTGGDFSIDLKLGQVSNPSSDFADK 60

Query: 1064 FKVPNVPKMALS-PSGSSKRARGTNNGTQTAMCLADGCNSDLNNCREYHRRHKVCELHSK 888
             K      +A   PSGSSKRAR TNNG+QT  CL DGCNSDL+NCREYHRRHKVCELHSK
Sbjct: 61   LKEQKFSSIAAPLPSGSSKRARATNNGSQTVSCLVDGCNSDLSNCREYHRRHKVCELHSK 120

Query: 887  TPQVTINGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSHAGSFFP 708
            T QVTI GH QRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLS  GSF  
Sbjct: 121  TAQVTIGGHTQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSRPGSFLT 180

Query: 707  SHQGTRLLQFSNPQVYPTTGVANPVW-ARIVKDQEDVQLYNHQSHLAHPHLPEKHNAFSE 531
            ++QG+ LL FS+P +YPTT + +P W A +VK +E   LYN    L  P L ++H     
Sbjct: 181  NYQGSGLLPFSSPHLYPTTAMMSPNWGAGLVKTEEGAILYNQHQQL--PLLEKQHLHLGS 238

Query: 530  SYCGDKRGKQLSFVHSTNLELSNQSGPESSVCQPLLINIASSGSGGAINKMFCDGFSTRV 351
            S    K GKQL+F+ + +  LSN +  E+ VCQPL      +G G    KMF D  + +V
Sbjct: 239  SSSFYKGGKQLTFLQADHPSLSNYTTSEAPVCQPL------AGHG---CKMFYDRLTNQV 289

Query: 350  FHSDCAXXXXXXSPTQTSDIGLSHAVQPNSIPVAHPLDSGLNYSS--LEPILVPNVSNAD 177
              SDCA        TQ+S I LS+ VQPNS+ +A P    L+Y++  ++ +LV N    D
Sbjct: 290  LESDCALSLLSSPQTQSSGISLSNMVQPNSVSLAQPSAPSLHYNNQPVDSVLVSNAGVTD 349

Query: 176  VHSMGMFPMAPHAARGNETPQTLPFYWE 93
            +H  G+F +    + GNE PQ LPF+W+
Sbjct: 350  IHCPGIFHIGSDGSSGNEAPQKLPFFWD 377


>gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoliata]
          Length = 379

 Score =  382 bits (980), Expect = e-103
 Identities = 203/392 (51%), Positives = 259/392 (66%), Gaps = 8/392 (2%)
 Frame = -1

Query: 1244 MDWNLKIPSWDLTDFEQAAIPNIDLVNGSSSSGGQGIKMDFSVDLKLGQVVDSGNELGDY 1065
            MDWNLK P+WD T+F+Q AIPN+D V+GSSS      K +FSVDLKLG+V  S  +  + 
Sbjct: 1    MDWNLK-PAWDFTEFQQEAIPNVDAVDGSSSR----TKGNFSVDLKLGRVNSSAEDSLNK 55

Query: 1064 FKVPNVPKM-ALSPSGSSKRARGTNNGTQTAMCLADGCNSDLNNCREYHRRHKVCELHSK 888
             K P   KM + SPSGS KRAR  NNG+QTA CL DGC+SDL+NCR+YHRRHKVCELHSK
Sbjct: 56   CKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSK 115

Query: 887  TPQVTINGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSHAGSFFP 708
            TPQV I G KQRFCQQCSRFH LEEFDEGKRSCRKRLDGHNRRRRKPQP+PLS  G+F  
Sbjct: 116  TPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDPLSRTGTFLS 175

Query: 707  SHQGTRLLQFSNPQVYPTTGVANPVWARIVKDQEDVQLYNHQSHLAHPHLPEKHNAF--- 537
            ++QG  LL FS+  +YP+  V  P W  +V  + D + YN    L   +LP++ N F   
Sbjct: 176  NYQGASLLPFSSSHMYPSATVVKPTWTGVVNTEADARCYNEHHRL---NLPDERNLFLRS 232

Query: 536  -SESYCGDKRGKQLSFVHSTNLELSNQSGPESSVCQPLLINIASSGSGGAINKMFCDGFS 360
             S SY   K GKQ +F+   N   ++Q+ PE+SV QPLL     S   GA + +F D  +
Sbjct: 233  PSSSY---KTGKQFTFLQGDNSTFNSQTSPEASVSQPLLGTANLSDRSGASHNVFHDRST 289

Query: 359  TRVFHSDCAXXXXXXSPTQTSDIGLSHAVQPNSIPVAHPLDSGLNYSSLEP---ILVPNV 189
            T+   SDCA        TQ+S I LS  + P+S+P+  PL + L+  S+EP   +LV + 
Sbjct: 290  TQ--DSDCALSLLSSPTTQSSGISLSQMMPPSSMPLVRPLGTSLHNHSVEPMESVLVSSD 347

Query: 188  SNADVHSMGMFPMAPHAARGNETPQTLPFYWE 93
             + +VH  G+F +    +  ++TPQT+PF+WE
Sbjct: 348  QDDNVHCPGVFHLGYDGSAASDTPQTIPFHWE 379


>ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Populus trichocarpa]
            gi|222869269|gb|EEF06400.1| hypothetical protein
            POPTRDRAFT_733659 [Populus trichocarpa]
          Length = 381

 Score =  381 bits (978), Expect = e-103
 Identities = 209/392 (53%), Positives = 258/392 (65%), Gaps = 8/392 (2%)
 Frame = -1

Query: 1244 MDWNLKIPSWDLTDFEQAAIPNI--DLVNGSSSSGGQGIKMDFSVDLKLGQVVDSGNELG 1071
            MDWNLK  SWDLT+FEQ A+P+I  D  + S++ G       FS+DLKLG+V DS +E  
Sbjct: 1    MDWNLKATSWDLTEFEQGAVPSISIDAFDRSTNFGVNRSGGGFSIDLKLGRVGDSSDESI 60

Query: 1070 DYFKVPNVPKMALSPSGSSKRARGTNNGTQTAMCLADGCNSDLNNCREYHRRHKVCELHS 891
              +K P V K+   PSGS+KRARG N+GTQ AMCL DGCNSDL+ CR+YHRRHKVCELHS
Sbjct: 61   INWKQPGVSKLQPLPSGSTKRARGANSGTQVAMCLVDGCNSDLSACRDYHRRHKVCELHS 120

Query: 890  KTPQVTINGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSHAGSFF 711
            KTPQVT+ G KQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP+P S   SF 
Sbjct: 121  KTPQVTVGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPDPHSRPPSFL 180

Query: 710  PSHQGTRLLQFSNPQVYPTTGVANPVWARIVKDQEDVQLYN-HQSHLAHPHLPEKHNAFS 534
             ++QGT+L  FS+  VYP++ V NP W+ +   + D + +N HQ       LP+K N F 
Sbjct: 181  SNYQGTQLFPFSSSHVYPSSTVLNPTWSGVASTEADGRHHNLHQ-------LPDKQNLFF 233

Query: 533  ESYCGDKRG-KQLSFVHSTNLELSNQSGPESSVCQPLLINIASSGSGGA-INKMFCDGFS 360
             S      G KQ  F+H  +  L+NQ+ PE+SVCQPLL  IA  GS GA  + MFCD   
Sbjct: 234  GSSSSSYHGVKQFPFLHWHSPGLNNQTSPEASVCQPLLRTIALPGSSGASSHSMFCDRL- 292

Query: 359  TRVFHSDCAXXXXXXSPTQTSDIGLSHAVQPNSIPVAHPLDSGLNYSSLEPI---LVPNV 189
            T++  SDCA      + T  S    +  VQ NS+P++HP+   ++   L PI   LV N 
Sbjct: 293  TQIQDSDCALSLLSSTQTHASG---NLMVQHNSVPLSHPIGPTVHDHGLGPIDSVLVFNN 349

Query: 188  SNADVHSMGMFPMAPHAARGNETPQTLPFYWE 93
             +A+VH  G F      + GN+ PQTLPF WE
Sbjct: 350  RDANVHFPGTFQPQSGGSSGNKAPQTLPFNWE 381


>gb|ADL36824.1| SPL domain class transcription factor [Malus x domestica]
          Length = 415

 Score =  364 bits (935), Expect = 2e-98
 Identities = 219/415 (52%), Positives = 265/415 (63%), Gaps = 31/415 (7%)
 Frame = -1

Query: 1244 MDWNLKIPSWDLTDFEQAAIPNID-LVNGSSSSGGQGI--KMDFSVDLKLGQVVDSGN-E 1077
            MDWNLK  SWDL + EQ    N+D +V+GSSS G        +FSVDLKLGQ+  SGN E
Sbjct: 1    MDWNLKAASWDLPELEQGTFSNLDTIVDGSSSFGDHRTFKGSNFSVDLKLGQLGGSGNNE 60

Query: 1076 LGDYFKVPNVPKM-ALSPSGSSKRARGTNNGTQTAMCLADGCNSDLNNCREYHRRHKVCE 900
            L    K P   K  + SPSG  KR+R   +G+Q   CL DGCNSDL+ CR+YHRRHKVCE
Sbjct: 61   LVGMLKEPGGLKTTSSSPSGPLKRSRAAYSGSQMVSCLVDGCNSDLSTCRDYHRRHKVCE 120

Query: 899  LHSKTPQVTINGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSHAG 720
            LHSKTPQVTING+KQRFCQQCSRFH+ EEFDEGKRSCRKRLDGHNRRRRKPQPEPLS  G
Sbjct: 121  LHSKTPQVTINGNKQRFCQQCSRFHAPEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSRPG 180

Query: 719  SFFPSHQGTRLLQFSNPQVYPTTGVANPVWAR-IVKDQEDVQLYNHQSHLAHPHLPEKHN 543
            SF  S+QGT+LL FS+  VYP+T V NP WA  IVK + D  ++N Q  L         +
Sbjct: 181  SFLSSYQGTQLLPFSSSLVYPSTNVINPTWATGIVKTEPDPGVHNLQLPLIDKQNMFLGS 240

Query: 542  AFSESYCGDKRGKQLSFVHSTN---LELSNQSGPE--SSVCQPLLINI-----ASSGSGG 393
            + S S  G K GKQ S   S+N   L  ++Q+     +SVCQPLL  I     AS G G 
Sbjct: 241  SVSTSSSGYKGGKQFSLFQSSNSSPLHHNHQTSHHHGTSVCQPLLNTISFSETASGGGGT 300

Query: 392  AINKMFCDGFSTRVFHSDCAXXXXXXSPT-QTSDIGLSHAV-QPNSIPVAH----PLDSG 231
              +KMFCD  +T++  SDCA        T QTS+IGL H V QPNSI +      P    
Sbjct: 301  TKSKMFCDRLTTQIHDSDCALSLLSSPQTQQTSEIGLRHTVQQPNSISLMQQRLGPNGLR 360

Query: 230  LNYSSLEP---ILVPNVS-NADVHSMGMFPMAPHAARGN-----ETPQTLPFYWE 93
             N SS+EP   ++V N S +A+VH  GMF +    ++GN     ++PQTLPF+W+
Sbjct: 361  RNNSSMEPMDSVMVSNGSGDANVHCPGMFRLISDGSQGNGNQHHQSPQTLPFHWQ 415


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