BLASTX nr result

ID: Panax21_contig00028324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028324
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26970.3| unnamed protein product [Vitis vinifera]              304   6e-81
ref|XP_002282940.1| PREDICTED: probable elongator complex protei...   304   6e-81
ref|XP_002526286.1| nucleotide binding protein, putative [Ricinu...   289   2e-76
ref|XP_003555922.1| PREDICTED: elongator complex protein 2-like ...   284   6e-75
ref|XP_003536666.1| PREDICTED: elongator complex protein 2-like ...   283   1e-74

>emb|CBI26970.3| unnamed protein product [Vitis vinifera]
          Length = 801

 Score =  304 bits (779), Expect = 6e-81
 Identities = 142/186 (76%), Positives = 161/186 (86%)
 Frame = +3

Query: 15  MSTNGAEVERVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTTQKLTTLPSHKAS 194
           MS +G  VERVFIGAGCNRIVNNVSWGA +LV+FGA+N VAIFCPK  Q LTTLP HKAS
Sbjct: 1   MSVDGIGVERVFIGAGCNRIVNNVSWGACDLVAFGAENGVAIFCPKAAQILTTLPGHKAS 60

Query: 195 VNCTHWLPGSKFAFKAKQLQHHFLLSGDADGAIILWELTLVDRKWRYVSLVPQPHKKGVT 374
           VNCTHW+P SKFAFK KQL+ H+LLSGDADG I+LWEL+L D+KWR+V  VPQPHKKGVT
Sbjct: 61  VNCTHWIPSSKFAFKEKQLERHYLLSGDADGVILLWELSLADKKWRHVLQVPQPHKKGVT 120

Query: 375 CITAIMISETDAIFASTSSDGTVNVWEVAFPSVVGGECKFSCLESLHVGPKSMVALSLAE 554
           CIT IM+SETD IFASTSSDGT+NVWE+  PS +GG+CK S LES+ VG KSMVALSL+E
Sbjct: 121 CITGIMVSETDVIFASTSSDGTINVWELILPSTIGGDCKLSFLESIFVGSKSMVALSLSE 180

Query: 555 LPGSTG 572
           LPG+TG
Sbjct: 181 LPGNTG 186


>ref|XP_002282940.1| PREDICTED: probable elongator complex protein 2-like [Vitis
           vinifera]
          Length = 839

 Score =  304 bits (779), Expect = 6e-81
 Identities = 142/186 (76%), Positives = 161/186 (86%)
 Frame = +3

Query: 15  MSTNGAEVERVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTTQKLTTLPSHKAS 194
           MS +G  VERVFIGAGCNRIVNNVSWGA +LV+FGA+N VAIFCPK  Q LTTLP HKAS
Sbjct: 1   MSVDGIGVERVFIGAGCNRIVNNVSWGACDLVAFGAENGVAIFCPKAAQILTTLPGHKAS 60

Query: 195 VNCTHWLPGSKFAFKAKQLQHHFLLSGDADGAIILWELTLVDRKWRYVSLVPQPHKKGVT 374
           VNCTHW+P SKFAFK KQL+ H+LLSGDADG I+LWEL+L D+KWR+V  VPQPHKKGVT
Sbjct: 61  VNCTHWIPSSKFAFKEKQLERHYLLSGDADGVILLWELSLADKKWRHVLQVPQPHKKGVT 120

Query: 375 CITAIMISETDAIFASTSSDGTVNVWEVAFPSVVGGECKFSCLESLHVGPKSMVALSLAE 554
           CIT IM+SETD IFASTSSDGT+NVWE+  PS +GG+CK S LES+ VG KSMVALSL+E
Sbjct: 121 CITGIMVSETDVIFASTSSDGTINVWELILPSTIGGDCKLSFLESIFVGSKSMVALSLSE 180

Query: 555 LPGSTG 572
           LPG+TG
Sbjct: 181 LPGNTG 186


>ref|XP_002526286.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223534367|gb|EEF36075.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 846

 Score =  289 bits (740), Expect = 2e-76
 Identities = 137/185 (74%), Positives = 157/185 (84%)
 Frame = +3

Query: 18  STNGAEVERVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTTQKLTTLPSHKASV 197
           S++  EV+RVFIGAGCNR+VNNVSWGAS+LVSFGAQNAV+IFCPKT Q LTTLP HKASV
Sbjct: 9   SSSEVEVKRVFIGAGCNRVVNNVSWGASDLVSFGAQNAVSIFCPKTAQILTTLPGHKASV 68

Query: 198 NCTHWLPGSKFAFKAKQLQHHFLLSGDADGAIILWELTLVDRKWRYVSLVPQPHKKGVTC 377
           NCTHW+P +KFAF+AK L  H+LLSGDADGAIILWEL+L DRKWR V  +P  HKKGVTC
Sbjct: 69  NCTHWIPSNKFAFRAKNLGQHYLLSGDADGAIILWELSLADRKWRQVLQLPHSHKKGVTC 128

Query: 378 ITAIMISETDAIFASTSSDGTVNVWEVAFPSVVGGECKFSCLESLHVGPKSMVALSLAEL 557
           I  IM+S+T+AIFAS SSDG+VN+WE+   S  GGECK SCLE+L VG K MVALSLAEL
Sbjct: 129 IAGIMVSQTEAIFASASSDGSVNIWELVLSSSPGGECKLSCLETLLVGSKPMVALSLAEL 188

Query: 558 PGSTG 572
           PG +G
Sbjct: 189 PGKSG 193


>ref|XP_003555922.1| PREDICTED: elongator complex protein 2-like [Glycine max]
          Length = 832

 Score =  284 bits (727), Expect = 6e-75
 Identities = 135/180 (75%), Positives = 152/180 (84%)
 Frame = +3

Query: 33  EVERVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTTQKLTTLPSHKASVNCTHW 212
           EV+RVFIGAGCNRIVNNVSWGAS L+SFGA NAVAIFCPK+ Q LTTLP HKA VNCTHW
Sbjct: 5   EVKRVFIGAGCNRIVNNVSWGASGLLSFGAHNAVAIFCPKSAQILTTLPGHKAVVNCTHW 64

Query: 213 LPGSKFAFKAKQLQHHFLLSGDADGAIILWELTLVDRKWRYVSLVPQPHKKGVTCITAIM 392
           LP S+F FKAKQL+ H+LLSGDADGAIILWEL+L D KWR V  +PQ HKKGVTCI+ IM
Sbjct: 65  LPSSRFLFKAKQLEQHYLLSGDADGAIILWELSLADGKWRQVLQLPQSHKKGVTCISGIM 124

Query: 393 ISETDAIFASTSSDGTVNVWEVAFPSVVGGECKFSCLESLHVGPKSMVALSLAELPGSTG 572
           +S+T+A+FASTSSDGT  VWE+AFP    G+CK SCL+S  VG KSMV LSLAELPG +G
Sbjct: 125 VSQTEAMFASTSSDGTACVWELAFPMTGSGDCKLSCLDSFSVGSKSMVTLSLAELPGDSG 184


>ref|XP_003536666.1| PREDICTED: elongator complex protein 2-like [Glycine max]
          Length = 839

 Score =  283 bits (725), Expect = 1e-74
 Identities = 135/180 (75%), Positives = 152/180 (84%)
 Frame = +3

Query: 33  EVERVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTTQKLTTLPSHKASVNCTHW 212
           EV+RVFIGAGCNRIVNNVSWGAS L+SFGA NAVAIFCPK+ Q LTTLP HKA VNCTHW
Sbjct: 12  EVKRVFIGAGCNRIVNNVSWGASGLLSFGAHNAVAIFCPKSAQILTTLPGHKAVVNCTHW 71

Query: 213 LPGSKFAFKAKQLQHHFLLSGDADGAIILWELTLVDRKWRYVSLVPQPHKKGVTCITAIM 392
           LP SKF FKAK L+ H+LLSGDADGAIILWEL+L D KWR +  +PQ HKKGVTCI+ IM
Sbjct: 72  LPSSKFLFKAKLLEQHYLLSGDADGAIILWELSLADGKWRQMLQLPQSHKKGVTCISGIM 131

Query: 393 ISETDAIFASTSSDGTVNVWEVAFPSVVGGECKFSCLESLHVGPKSMVALSLAELPGSTG 572
           +S+T+AIFASTSSDGT  VWE+ FP+   G+CK SCL+S  VG KSMVALSLAELPG +G
Sbjct: 132 VSQTEAIFASTSSDGTACVWELVFPTTGSGDCKLSCLDSFSVGSKSMVALSLAELPGDSG 191


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