BLASTX nr result

ID: Panax21_contig00028320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028320
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18210.3| unnamed protein product [Vitis vinifera]              238   2e-60
ref|XP_002265483.1| PREDICTED: uncharacterized protein LOC100257...   238   2e-60
ref|XP_002307499.1| predicted protein [Populus trichocarpa] gi|2...   223   6e-56
ref|XP_002300916.1| predicted protein [Populus trichocarpa] gi|2...   221   2e-55
ref|XP_002524289.1| conserved hypothetical protein [Ricinus comm...   219   7e-55

>emb|CBI18210.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score =  238 bits (607), Expect = 2e-60
 Identities = 122/195 (62%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
 Frame = +2

Query: 218 SATVVVDGVSEWKDPTVQIGDSIIFEHKNHYNLYIFQNRRAFNLCNFTQATLLNKPNSTS 397
           S TVVVDGVSEWK+P V +GDSIIF H+NHYNLY+FQNR AFNLCNFTQATLL KPNSTS
Sbjct: 19  STTVVVDGVSEWKNPIVHVGDSIIFRHRNHYNLYVFQNREAFNLCNFTQATLLTKPNSTS 78

Query: 398 YTWHPSRLGFFYFSFNNGSTRPCQEGQKLAIKV-----XXXXXXXXXXXXXXXXXXXXXG 562
           YTWHPSR GFFYFSFNNGS   CQ+ QKLAIKV                          G
Sbjct: 79  YTWHPSRTGFFYFSFNNGSLEACQQAQKLAIKVQASAKPRDNWATSPALPPRAAPAPTSG 138

Query: 563 GEVSSSPVYPWPFRPRDXXXXXXXXTGSILPASSPSMGPDNKGGDGIPFINSNPAVPLPT 742
           G  +SSPVYPWPFRP +          S  P++SP        G GIPFINSNPAVPLPT
Sbjct: 139 GTPTSSPVYPWPFRPHE------AAPSSAEPSASPPATVMPDKGAGIPFINSNPAVPLPT 192

Query: 743 GEVDSATIGPLPISG 787
           GEVDSATI P+P SG
Sbjct: 193 GEVDSATIRPVPTSG 207


>ref|XP_002265483.1| PREDICTED: uncharacterized protein LOC100257188 [Vitis vinifera]
          Length = 238

 Score =  238 bits (607), Expect = 2e-60
 Identities = 122/195 (62%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
 Frame = +2

Query: 218 SATVVVDGVSEWKDPTVQIGDSIIFEHKNHYNLYIFQNRRAFNLCNFTQATLLNKPNSTS 397
           S TVVVDGVSEWK+P V +GDSIIF H+NHYNLY+FQNR AFNLCNFTQATLL KPNSTS
Sbjct: 24  STTVVVDGVSEWKNPIVHVGDSIIFRHRNHYNLYVFQNREAFNLCNFTQATLLTKPNSTS 83

Query: 398 YTWHPSRLGFFYFSFNNGSTRPCQEGQKLAIKV-----XXXXXXXXXXXXXXXXXXXXXG 562
           YTWHPSR GFFYFSFNNGS   CQ+ QKLAIKV                          G
Sbjct: 84  YTWHPSRTGFFYFSFNNGSLEACQQAQKLAIKVQASAKPRDNWATSPALPPRAAPAPTSG 143

Query: 563 GEVSSSPVYPWPFRPRDXXXXXXXXTGSILPASSPSMGPDNKGGDGIPFINSNPAVPLPT 742
           G  +SSPVYPWPFRP +          S  P++SP        G GIPFINSNPAVPLPT
Sbjct: 144 GTPTSSPVYPWPFRPHE------AAPSSAEPSASPPATVMPDKGAGIPFINSNPAVPLPT 197

Query: 743 GEVDSATIGPLPISG 787
           GEVDSATI P+P SG
Sbjct: 198 GEVDSATIRPVPTSG 212


>ref|XP_002307499.1| predicted protein [Populus trichocarpa] gi|222856948|gb|EEE94495.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  223 bits (568), Expect = 6e-56
 Identities = 119/212 (56%), Positives = 139/212 (65%), Gaps = 10/212 (4%)
 Frame = +2

Query: 212 TESATVVVDGVSEWKDPTVQIGDSIIFEHKNHYNLYIFQNRRAFNLCNFTQATLLNKPNS 391
           ++S T++VDG SEWKDP V IGDSIIF HK  Y LYIFQN+RAF+LCNFTQATLL KPNS
Sbjct: 31  SDSTTILVDGFSEWKDPNVYIGDSIIFNHKYRYKLYIFQNQRAFSLCNFTQATLLTKPNS 90

Query: 392 TSYTWHPSRLGFFYFSFNNGSTRPC-QEGQKLAIKV-XXXXXXXXXXXXXXXXXXXXXGG 565
           TSYTWHPSR GFFYF+FNNGS + C  + QK++IKV                       G
Sbjct: 91  TSYTWHPSRPGFFYFTFNNGSLKSCNHDSQKVSIKVSPSPPPPVQLPPMASTPVPAPIPG 150

Query: 566 EVSSSPVYPWPFRPRDXXXXXXXXTGSILPASS-----PSMGPDNKGGDGIPFINSNPAV 730
           ++++SP   WP+ PRD          S   ASS     P+  PD  GG GIPFINSNPAV
Sbjct: 151 DITASPP-AWPYHPRDETASSPAPAPSGSAASSPMETVPTSTPDKSGGSGIPFINSNPAV 209

Query: 731 PLPTGEVDSATIGPLPISGDHKL---QVMGFH 817
           PLPTGE+DSATI PL  SG HKL    ++GFH
Sbjct: 210 PLPTGEIDSATIRPLSTSGHHKLVAVGLLGFH 241


>ref|XP_002300916.1| predicted protein [Populus trichocarpa] gi|222842642|gb|EEE80189.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  221 bits (563), Expect = 2e-55
 Identities = 121/198 (61%), Positives = 135/198 (68%), Gaps = 9/198 (4%)
 Frame = +2

Query: 218 SATVVVDGVSEWKDPTVQIGDSIIFEHKNHYNLYIFQNRRAFNLCNFTQATLLNKPNSTS 397
           S T++VDGVSEWKDP V IGDSIIF+HK HY+LYIFQN+RAFN+CNFTQATLL KPNSTS
Sbjct: 11  STTILVDGVSEWKDPNVYIGDSIIFKHKFHYSLYIFQNQRAFNICNFTQATLLTKPNSTS 70

Query: 398 YTWHPSRLGFFYFSFNNGSTRPC-QEGQKLAIKV---XXXXXXXXXXXXXXXXXXXXXGG 565
           YTW+PSR GFFYF+FNNGS + C Q+ QKL+IKV                        G 
Sbjct: 71  YTWYPSRPGFFYFTFNNGSLKSCNQDSQKLSIKVSPAPPPPPAQLPPTASPPVPAQIPGD 130

Query: 566 EVSSSPVYPWPFRPRDXXXXXXXXTGSILPASS-----PSMGPDNKGGDGIPFINSNPAV 730
            VSSSP Y WP RPRD              ASS     P++ PD KGG GIPFINSNPAV
Sbjct: 131 IVSSSPAYQWPSRPRDETAFSPAPEPGGSAASSPMATVPTLMPD-KGG-GIPFINSNPAV 188

Query: 731 PLPTGEVDSATIGPLPIS 784
           PLPTGE+DSATI PLP S
Sbjct: 189 PLPTGEIDSATIRPLPTS 206


>ref|XP_002524289.1| conserved hypothetical protein [Ricinus communis]
           gi|223536380|gb|EEF38029.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 223

 Score =  219 bits (559), Expect = 7e-55
 Identities = 119/209 (56%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
 Frame = +2

Query: 218 SATVVVDGVSEWKDPTVQIGDSIIFEHKNHYNLYIFQNRRAFNLCNFTQATLLNKPNSTS 397
           S T++VDGV+EW +P V +GDSIIF+HK HYNLYIFQN+RAF+LCNFTQA+LL KPNSTS
Sbjct: 19  SKTILVDGVTEWNNPNVHVGDSIIFKHKYHYNLYIFQNQRAFDLCNFTQASLLTKPNSTS 78

Query: 398 YTWHPSRLGFFYFSFNNGSTRPC-QEGQKLAIKVXXXXXXXXXXXXXXXXXXXXXGGEVS 574
           Y W+PSR GF+YF+FNNGS + C Q  QKL IKV                     GG V 
Sbjct: 79  YMWYPSRPGFYYFAFNNGSLKSCTQNSQKLPIKV-----SPAAPPLAAPIPAPNSGGAVP 133

Query: 575 SSPVYPWPFRPRDXXXXXXXXTGSILPASSPSMG-----PDNKGGDGIPFINSNPAVPLP 739
           SSP YPWPFRPR+          +  PA  PS G     P N  G+ +PFINSNPAVPLP
Sbjct: 134 SSPGYPWPFRPRET---------ASSPAPEPSSGGGVSSPGN--GNSMPFINSNPAVPLP 182

Query: 740 TGEVDSATIGPLPISGDH---KLQVMGFH 817
           TGEVDSATI PLP SG H    L ++G H
Sbjct: 183 TGEVDSATIRPLPSSGHHHQVSLGLLGAH 211


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