BLASTX nr result

ID: Panax21_contig00028301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028301
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC92796.1| SBP-box transcription factor [Betula luminifera]       332   1e-88
ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like pr...   331   2e-88
gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoli...   315   9e-84
ref|XP_002318746.1| hypothetical protein POPTRDRAFT_570289 [Popu...   315   1e-83
ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Popu...   308   2e-81

>gb|AGC92796.1| SBP-box transcription factor [Betula luminifera]
          Length = 389

 Score =  332 bits (851), Expect = 1e-88
 Identities = 172/306 (56%), Positives = 204/306 (66%), Gaps = 3/306 (0%)
 Frame = -1

Query: 911 MDWILKTHSWDLTDFEQETIPNINPIXXXXXXXXXGIK-GDFSVDLKLGHVVDSGNELGE 735
           MDW LK  SWDLT+ EQE  PNI  +             GDFSVDLKLG + +SG E   
Sbjct: 1   MDWHLKASSWDLTELEQEAFPNIETVGGSSSLKDLRTNTGDFSVDLKLGQLGNSGPESVN 60

Query: 734 TSKVPNVPKMALSPSGSSKRARAINNGIQTASCLVDGCNADLSNCREYHRRHKVCELHSK 555
             K P V K+A SPSGSSKRARA NNG Q  SCLVDGC +DLSNCR+YHRRHKVCELHSK
Sbjct: 61  KWKEPGVSKIASSPSGSSKRARAANNGTQPVSCLVDGCTSDLSNCRDYHRRHKVCELHSK 120

Query: 554 TPQVTINGHKKRFCQQCSRFHSLEEFDNGKRSCRKRLDGHNRRRRKPQPEPLSCAGNFLP 375
           TP+VTI G K+RFCQQCSRFHSLEEFD GKRSCRKRLDGHNRRRRKPQPEPLS +GNFL 
Sbjct: 121 TPEVTICGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSRSGNFLS 180

Query: 374 SHQGNRLMQFYNPQVYPTTAVANPIWAGIVKAEEDAKLYSHHLHSHLPDKHDAVPEF--S 201
           ++QG +++ F +  VYP+T V +  WAG++ +  DA+L++      L D+         S
Sbjct: 181 NYQGTQVIPFSSSLVYPSTTVVSAAWAGVLNSAADARLHNQQQQLQLIDEQKLFLRSPPS 240

Query: 200 SSSDKRGKQFSFVNSTNLELSNRSAQAATVCQPLLNNIXXXXXXXXSNKMLCDGFSTRVL 21
           +SS   GKQ S +   +  L N+S+  A VC+PLL  I          KM CD  +TRV 
Sbjct: 241 TSSFIGGKQLSSLQGGSTTLGNQSSLEAPVCRPLLRTIALAESGGARTKMYCDRLTTRVE 300

Query: 20  HSDCAL 3
            SDCAL
Sbjct: 301 ESDCAL 306


>ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like protein 13 [Vitis
           vinifera] gi|147837620|emb|CAN77059.1| hypothetical
           protein VITISV_022138 [Vitis vinifera]
           gi|297734432|emb|CBI15679.3| unnamed protein product
           [Vitis vinifera]
          Length = 377

 Score =  331 bits (848), Expect = 2e-88
 Identities = 174/305 (57%), Positives = 205/305 (67%), Gaps = 2/305 (0%)
 Frame = -1

Query: 911 MDWILKTHSWDLTDFEQETIPNINPIXXXXXXXXXGIKGDFSVDLKLGHVVDSGNELGET 732
           MDW LKT SWDLT+ E E IPNI+ +            GDFS+DLKLG V +  ++  + 
Sbjct: 1   MDWNLKTPSWDLTELETEAIPNIDVVGGTSSSGVHKTGGDFSIDLKLGQVSNPSSDFADK 60

Query: 731 SKVPNVPKMALS-PSGSSKRARAINNGIQTASCLVDGCNADLSNCREYHRRHKVCELHSK 555
            K      +A   PSGSSKRARA NNG QT SCLVDGCN+DLSNCREYHRRHKVCELHSK
Sbjct: 61  LKEQKFSSIAAPLPSGSSKRARATNNGSQTVSCLVDGCNSDLSNCREYHRRHKVCELHSK 120

Query: 554 TPQVTINGHKKRFCQQCSRFHSLEEFDNGKRSCRKRLDGHNRRRRKPQPEPLSCAGNFLP 375
           T QVTI GH +RFCQQCSRFHSLEEFD GKRSCRKRLDGHNRRRRKPQPEPLS  G+FL 
Sbjct: 121 TAQVTIGGHTQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLSRPGSFLT 180

Query: 374 SHQGNRLMQFYNPQVYPTTAVANPIW-AGIVKAEEDAKLYSHHLHSHLPDKHDAVPEFSS 198
           ++QG+ L+ F +P +YPTTA+ +P W AG+VK EE A LY+ H    L +K       SS
Sbjct: 181 NYQGSGLLPFSSPHLYPTTAMMSPNWGAGLVKTEEGAILYNQHQQLPLLEKQHLHLGSSS 240

Query: 197 SSDKRGKQFSFVNSTNLELSNRSAQAATVCQPLLNNIXXXXXXXXSNKMLCDGFSTRVLH 18
           S  K GKQ +F+ + +  LSN +   A VCQPL  +           KM  D  + +VL 
Sbjct: 241 SFYKGGKQLTFLQADHPSLSNYTTSEAPVCQPLAGH---------GCKMFYDRLTNQVLE 291

Query: 17  SDCAL 3
           SDCAL
Sbjct: 292 SDCAL 296


>gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoliata]
          Length = 379

 Score =  315 bits (808), Expect = 9e-84
 Identities = 164/304 (53%), Positives = 202/304 (66%), Gaps = 1/304 (0%)
 Frame = -1

Query: 911 MDWILKTHSWDLTDFEQETIPNINPIXXXXXXXXXGIKGDFSVDLKLGHVVDSGNELGET 732
           MDW LK  +WD T+F+QE IPN++ +           KG+FSVDLKLG V  S  +    
Sbjct: 1   MDWNLKP-AWDFTEFQQEAIPNVDAVDGSSSRT----KGNFSVDLKLGRVNSSAEDSLNK 55

Query: 731 SKVPNVPKM-ALSPSGSSKRARAINNGIQTASCLVDGCNADLSNCREYHRRHKVCELHSK 555
            K P   KM + SPSGS KRARA NNG QTASCLVDGC++DLSNCR+YHRRHKVCELHSK
Sbjct: 56  CKEPGASKMESPSPSGSFKRARAANNGSQTASCLVDGCDSDLSNCRDYHRRHKVCELHSK 115

Query: 554 TPQVTINGHKKRFCQQCSRFHSLEEFDNGKRSCRKRLDGHNRRRRKPQPEPLSCAGNFLP 375
           TPQV I G K+RFCQQCSRFH LEEFD GKRSCRKRLDGHNRRRRKPQP+PLS  G FL 
Sbjct: 116 TPQVLICGQKQRFCQQCSRFHCLEEFDEGKRSCRKRLDGHNRRRRKPQPDPLSRTGTFLS 175

Query: 374 SHQGNRLMQFYNPQVYPTTAVANPIWAGIVKAEEDAKLYSHHLHSHLPDKHDAVPEFSSS 195
           ++QG  L+ F +  +YP+  V  P W G+V  E DA+ Y+ H   +LPD+ +      SS
Sbjct: 176 NYQGASLLPFSSSHMYPSATVVKPTWTGVVNTEADARCYNEHHRLNLPDERNLFLRSPSS 235

Query: 194 SDKRGKQFSFVNSTNLELSNRSAQAATVCQPLLNNIXXXXXXXXSNKMLCDGFSTRVLHS 15
           S K GKQF+F+   N   +++++  A+V QPLL           S+ +  D  +T+   S
Sbjct: 236 SYKTGKQFTFLQGDNSTFNSQTSPEASVSQPLLGTANLSDRSGASHNVFHDRSTTQ--DS 293

Query: 14  DCAL 3
           DCAL
Sbjct: 294 DCAL 297


>ref|XP_002318746.1| hypothetical protein POPTRDRAFT_570289 [Populus trichocarpa]
           gi|222859419|gb|EEE96966.1| hypothetical protein
           POPTRDRAFT_570289 [Populus trichocarpa]
          Length = 346

 Score =  315 bits (807), Expect = 1e-83
 Identities = 167/306 (54%), Positives = 201/306 (65%), Gaps = 3/306 (0%)
 Frame = -1

Query: 911 MDWILKTHSWDLTDFEQETIPNI--NPIXXXXXXXXXGIKGDFSVDLKLGHVVDSGNELG 738
           MDW LK  SWDLT+FEQ  +P+I  +              G FS+DLKLG V +S +E  
Sbjct: 17  MDWNLKATSWDLTEFEQGAVPSICIDAFGRPTNFGANRTGGGFSIDLKLGRVGNSSDESM 76

Query: 737 ETSKVPNVPKMALSPSGSSKRARAINNGIQTASCLVDGCNADLSNCREYHRRHKVCELHS 558
              K P V K+  SPSGS+KRAR  NNG Q A CLVDGCN+DLS CR+YHRRHKVCELHS
Sbjct: 77  VNWKQPGVSKLESSPSGSTKRARGANNGTQVAMCLVDGCNSDLSTCRDYHRRHKVCELHS 136

Query: 557 KTPQVTINGHKKRFCQQCSRFHSLEEFDNGKRSCRKRLDGHNRRRRKPQPEPLSCAGNFL 378
           KTPQVTI G K+RFCQQCSRFHSLEEFD GKRSCRKRLDGHNRRRRKPQP+P S   +FL
Sbjct: 137 KTPQVTIGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPDPFSHPPSFL 196

Query: 377 PSHQGNRLMQFYNPQVYPTTAVANPIWAGIVKAEEDAKLYSHHLHSHLPDKHDAVPEFSS 198
           P+HQG ++  F +  VY +TAV N  W+G+   E D   Y+ H    LPDK +     SS
Sbjct: 197 PNHQGTQIFPFSSSHVYHSTAVVNSTWSGVANTEADGGHYNLH---QLPDKQNLFLGSSS 253

Query: 197 SSDKRGKQFSFVNSTNLELSNRSAQAATVCQPLLNNI-XXXXXXXXSNKMLCDGFSTRVL 21
           +S K GK F F+   N  L+N++++ A+VC PL   I         S+ M CD  +T+V 
Sbjct: 254 NSYKGGKLFPFLQCDNPCLNNQTSE-ASVCLPLPRAIAFPGSSGASSHSMFCDRLATQVQ 312

Query: 20  HSDCAL 3
            SDCAL
Sbjct: 313 DSDCAL 318


>ref|XP_002322273.1| hypothetical protein POPTRDRAFT_733659 [Populus trichocarpa]
           gi|222869269|gb|EEF06400.1| hypothetical protein
           POPTRDRAFT_733659 [Populus trichocarpa]
          Length = 381

 Score =  308 bits (789), Expect = 2e-81
 Identities = 164/306 (53%), Positives = 200/306 (65%), Gaps = 3/306 (0%)
 Frame = -1

Query: 911 MDWILKTHSWDLTDFEQETIPNIN--PIXXXXXXXXXGIKGDFSVDLKLGHVVDSGNELG 738
           MDW LK  SWDLT+FEQ  +P+I+                G FS+DLKLG V DS +E  
Sbjct: 1   MDWNLKATSWDLTEFEQGAVPSISIDAFDRSTNFGVNRSGGGFSIDLKLGRVGDSSDESI 60

Query: 737 ETSKVPNVPKMALSPSGSSKRARAINNGIQTASCLVDGCNADLSNCREYHRRHKVCELHS 558
              K P V K+   PSGS+KRAR  N+G Q A CLVDGCN+DLS CR+YHRRHKVCELHS
Sbjct: 61  INWKQPGVSKLQPLPSGSTKRARGANSGTQVAMCLVDGCNSDLSACRDYHRRHKVCELHS 120

Query: 557 KTPQVTINGHKKRFCQQCSRFHSLEEFDNGKRSCRKRLDGHNRRRRKPQPEPLSCAGNFL 378
           KTPQVT+ G K+RFCQQCSRFHSLEEFD GKRSCRKRLDGHNRRRRKPQP+P S   +FL
Sbjct: 121 KTPQVTVGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPDPHSRPPSFL 180

Query: 377 PSHQGNRLMQFYNPQVYPTTAVANPIWAGIVKAEEDAKLYSHHLHSHLPDKHDAVPEFSS 198
            ++QG +L  F +  VYP++ V NP W+G+   E D +   HH    LPDK +     SS
Sbjct: 181 SNYQGTQLFPFSSSHVYPSSTVLNPTWSGVASTEADGR---HHNLHQLPDKQNLFFGSSS 237

Query: 197 SSDKRGKQFSFVNSTNLELSNRSAQAATVCQPLLNNI-XXXXXXXXSNKMLCDGFSTRVL 21
           SS    KQF F++  +  L+N+++  A+VCQPLL  I         S+ M CD   T++ 
Sbjct: 238 SSYHGVKQFPFLHWHSPGLNNQTSPEASVCQPLLRTIALPGSSGASSHSMFCDRL-TQIQ 296

Query: 20  HSDCAL 3
            SDCAL
Sbjct: 297 DSDCAL 302


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