BLASTX nr result

ID: Panax21_contig00028296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028296
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-li...   243   7e-62
ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|2...   229   8e-58
ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793...   223   7e-56
ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [S...   216   1e-53
ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-li...   214   5e-53

>ref|XP_002263666.2| PREDICTED: peptide chain release factor 1-like [Vitis vinifera]
           gi|297734721|emb|CBI16955.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  243 bits (620), Expect = 7e-62
 Identities = 131/181 (72%), Positives = 142/181 (78%)
 Frame = -1

Query: 941 SGIGFGRELLGLTDEQLLSQCDMSTFKSSGPGGQLRNKRETAVRLKHLSTGIIAQAAEDR 762
           SG G  RE LGL+DEQL+ QC+MSTFKSSGPGGQ RNKRE+AVRLKHL TGIIAQA EDR
Sbjct: 45  SGSG-SREFLGLSDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDR 103

Query: 761 SQHMNRASXXXXXXXXXXLKVRNTIDLDTYTPPQELLQILPAKSTIRGSDCGSQIGPKNP 582
           SQH NRAS          LKVRN+IDLDTY+PP ELLQILPAKSTIR SDCG QIGP NP
Sbjct: 104 SQHKNRASALARLRTLLALKVRNSIDLDTYSPPLELLQILPAKSTIRTSDCGPQIGPNNP 163

Query: 581 KFVLGMQALLDLICAVDGSVADAAKKLGLSTGAXXXXXXXXXXXRMAVNEFRTSKGMKPL 402
           KF LGM ALLDLI AV+GS++DAAK +GLSTGA           RMAVNE RTSKG+KPL
Sbjct: 164 KFALGMLALLDLIFAVEGSISDAAKLMGLSTGALSRLVLSDDSLRMAVNELRTSKGLKPL 223

Query: 401 K 399
           K
Sbjct: 224 K 224


>ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|222870969|gb|EEF08100.1|
            predicted protein [Populus trichocarpa]
          Length = 257

 Score =  229 bits (585), Expect = 8e-58
 Identities = 137/260 (52%), Positives = 167/260 (64%), Gaps = 15/260 (5%)
 Frame = -1

Query: 1151 IMSQSLFKSFLKLPRIIISTNSSVLS------------IPCY---SSNFSKNLYLPNPTR 1017
            + + SL KS L L R+ I+TN+ V S            I C+    SN +K+ +  +PT 
Sbjct: 3    VSAHSLLKSMLLL-RLPITTNTIVPSRISRPSSSPLNLISCHYLNGSNRTKSRHFHSPTL 61

Query: 1016 TTCILRTIKCYXXXXXXXXXSHEIGSGIGFGRELLGLTDEQLLSQCDMSTFKSSGPGGQL 837
             T    T K           ++   +  G G   L LTD++L+ QC+M TFK+SGPGGQ 
Sbjct: 62   YTRTAETPK-----KRLICFNYNTSASHGNGTNYLELTDDELMRQCEMDTFKASGPGGQH 116

Query: 836  RNKRETAVRLKHLSTGIIAQAAEDRSQHMNRASXXXXXXXXXXLKVRNTIDLDTYTPPQE 657
            RNKRE+AVRLKHL TGIIAQA EDRSQHMNRAS          ++VRN++D+D+YTP  E
Sbjct: 117  RNKRESAVRLKHLPTGIIAQAVEDRSQHMNRASALKRLRALLAIRVRNSLDIDSYTPRLE 176

Query: 656  LLQILPAKSTIRGSDCGSQIGPKNPKFVLGMQALLDLICAVDGSVADAAKKLGLSTGAXX 477
            LLQILP KSTIRGSDCG QIGPKNPKF+LGMQALLDLI AVDGS+++A K LGLSTGA  
Sbjct: 177  LLQILPLKSTIRGSDCGPQIGPKNPKFILGMQALLDLIFAVDGSISEAGKLLGLSTGALS 236

Query: 476  XXXXXXXXXRMAVNEFRTSK 417
                     RMAVN+ R SK
Sbjct: 237  RLILSDDSLRMAVNDLRNSK 256


>ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793467 [Glycine max]
          Length = 250

 Score =  223 bits (568), Expect = 7e-56
 Identities = 116/172 (67%), Positives = 133/172 (77%)
 Frame = -1

Query: 914 LGLTDEQLLSQCDMSTFKSSGPGGQLRNKRETAVRLKHLSTGIIAQAAEDRSQHMNRASX 735
           L L+DE+L+ QC+M TFK+SGPGGQ RNKRE+AVRLKHL TGIIAQA+EDRSQH NRAS 
Sbjct: 79  LNLSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQASEDRSQHKNRASA 138

Query: 734 XXXXXXXXXLKVRNTIDLDTYTPPQELLQILPAKSTIRGSDCGSQIGPKNPKFVLGMQAL 555
                    LKVR T+DL+ Y+PP+ELLQILP KS+IRGSDCGSQIGP NPKF  GMQAL
Sbjct: 139 INRLRSLIALKVRKTVDLEAYSPPRELLQILPPKSSIRGSDCGSQIGPNNPKFASGMQAL 198

Query: 554 LDLICAVDGSVADAAKKLGLSTGAXXXXXXXXXXXRMAVNEFRTSKGMKPLK 399
           LDLI AV+GSV++AAK LGLSTGA           R  VN+ R +KGMKPLK
Sbjct: 199 LDLIFAVEGSVSEAAKYLGLSTGALSRLILSDDSLRKEVNDLRATKGMKPLK 250


>ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
           gi|241930860|gb|EES04005.1| hypothetical protein
           SORBIDRAFT_03g042170 [Sorghum bicolor]
          Length = 259

 Score =  216 bits (549), Expect = 1e-53
 Identities = 116/181 (64%), Positives = 131/181 (72%)
 Frame = -1

Query: 941 SGIGFGRELLGLTDEQLLSQCDMSTFKSSGPGGQLRNKRETAVRLKHLSTGIIAQAAEDR 762
           SG G   + LG++DE+L+ QCDM TFK+SGPGGQ RNKRE+AVRLKHL TGIIAQA EDR
Sbjct: 79  SGGGGHVDYLGMSDEELMEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDR 138

Query: 761 SQHMNRASXXXXXXXXXXLKVRNTIDLDTYTPPQELLQILPAKSTIRGSDCGSQIGPKNP 582
           SQH NRAS          LKVR  I+LD YTPP ELLQILP KST+RG D G QIGP N 
Sbjct: 139 SQHKNRASALSRLRTLIALKVRRPINLDDYTPPVELLQILPLKSTVRGKDVGPQIGPNNS 198

Query: 581 KFVLGMQALLDLICAVDGSVADAAKKLGLSTGAXXXXXXXXXXXRMAVNEFRTSKGMKPL 402
           KF  GMQALLDL+ AV+GS++DAAK LGLSTGA           R A NE R SKG+KPL
Sbjct: 199 KFSPGMQALLDLLFAVEGSISDAAKILGLSTGALSRLILSDDSLRTAANELRASKGLKPL 258

Query: 401 K 399
           +
Sbjct: 259 R 259


>ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
           gi|449526225|ref|XP_004170114.1| PREDICTED: peptide
           chain release factor 1-like [Cucumis sativus]
          Length = 240

 Score =  214 bits (544), Expect = 5e-53
 Identities = 110/176 (62%), Positives = 131/176 (74%)
 Frame = -1

Query: 926 GRELLGLTDEQLLSQCDMSTFKSSGPGGQLRNKRETAVRLKHLSTGIIAQAAEDRSQHMN 747
           G++ L L+DE+L+ QC+M TFK+SGPGGQ RNKRE+AVRLKH+ TGIIAQA EDRSQH N
Sbjct: 65  GKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHKN 124

Query: 746 RASXXXXXXXXXXLKVRNTIDLDTYTPPQELLQILPAKSTIRGSDCGSQIGPKNPKFVLG 567
           R+S          LKVRN +DL+ Y+PP ELLQILP KST+R  +CG QIGP N KF+ G
Sbjct: 125 RSSALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTVRPPECGPQIGPNNSKFLPG 184

Query: 566 MQALLDLICAVDGSVADAAKKLGLSTGAXXXXXXXXXXXRMAVNEFRTSKGMKPLK 399
           MQALLDLI  +DGSV+D AK LGL+TGA           RMAVN+ R SKG+KPLK
Sbjct: 185 MQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLKPLK 240


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