BLASTX nr result

ID: Panax21_contig00028275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028275
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525074.1| hypothetical protein RCOM_0745050 [Ricinus c...    64   1e-08
ref|XP_003633444.1| PREDICTED: uncharacterized protein LOC100854...    63   2e-08
ref|XP_002316327.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
ref|XP_002316325.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002525074.1| hypothetical protein RCOM_0745050 [Ricinus communis]
           gi|223535655|gb|EEF37321.1| hypothetical protein
           RCOM_0745050 [Ricinus communis]
          Length = 1517

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
 Frame = -1

Query: 347 DSKVNSASTHVHPNRSNWDLNTSMDVWEEPVG-EGPQIVGVSGFKMPGFIHGMEPLISST 171
           D + N+ S+ +  +RSNWDLNT+MD WE  VG E    V   G K  G  H ++PL+ ST
Sbjct: 372 DVQSNTDSSKIFADRSNWDLNTTMDTWEASVGEEAAGQVTAGGSKKVGVTHDIKPLM-ST 430

Query: 170 AVLGVDSDAREQVIGAVDRISNFSMSSLPPSRQCGSEESLHLSMS 36
            ++G    + +Q+    +  ++F+ +S        SE+ LHL +S
Sbjct: 431 GMVGASIASEKQLFKESESRTSFARASSQSVETSNSEDRLHLRLS 475


>ref|XP_003633444.1| PREDICTED: uncharacterized protein LOC100854874 [Vitis vinifera]
          Length = 916

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
 Frame = -1

Query: 374 KCAGRYEGCDSKVNSASTHVHPNRSNWDLNTSMDVWEEPVGEGPQIVGVSG---FKMPGF 204
           K +  Y     K+N    H+  NRSNWDLNT+MD W+    +G    G  G     +   
Sbjct: 221 KSSINYGSGKDKLNVDGAHLQANRSNWDLNTTMDAWDRSESDGAACQGTDGINCLNVTSD 280

Query: 203 IHGMEPLISSTAVLGVDSDAREQVIGAVDRISNFSMSSLPPSRQCGSEESLHLSMSTFAQ 24
              ++PLI S  ++     +  Q +       NF++SS  P +     +SL L +S   Q
Sbjct: 281 TQDIKPLIRSDGMVVAGVASGNQFLKGSKHNPNFTISSKSPGQHYNFGDSLLLQLSPCLQ 340

Query: 23  PNFSGE 6
           P   GE
Sbjct: 341 PIIGGE 346


>ref|XP_002316327.1| predicted protein [Populus trichocarpa] gi|222865367|gb|EEF02498.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -1

Query: 332 SASTHVHPNRSNWDLNTSMDVWEEPVG-EGPQIVGVSGFKMPGFIHGMEPLISSTAVLGV 156
           + ST +  NRSNWDLNT+ D W+     E    V    +   G IH +     +T V+G 
Sbjct: 233 TGSTDLRTNRSNWDLNTTADTWDGSTSDEHAAQVTADAWNRVGVIHDI-----TTGVIGT 287

Query: 155 DSDAREQVIGAVDRISNFSMSSLPPSRQCGSEESLHLSMS-TFAQPNFSGE 6
                 Q++   +  S+F  +    +++C SE+SLHL +S +F   N S E
Sbjct: 288 GIAKERQLLDGSECRSSFPQTFSECAKECTSEDSLHLRLSPSFPSINLSKE 338


>ref|XP_002316325.1| predicted protein [Populus trichocarpa] gi|222865365|gb|EEF02496.1|
           predicted protein [Populus trichocarpa]
          Length = 1317

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -1

Query: 332 SASTHVHPNRSNWDLNTSMDVWEEPVG-EGPQIVGVSGFKMPGFIHGMEPLISSTAVLGV 156
           + ST +  NRSNWDLNT+ D W+     E    V    +   G IH +     +T V+G 
Sbjct: 233 TGSTDLRTNRSNWDLNTTADTWDGSTSDEHAAQVTADAWNRVGVIHDI-----TTGVIGT 287

Query: 155 DSDAREQVIGAVDRISNFSMSSLPPSRQCGSEESLHLSMS-TFAQPNFSGE 6
                 Q++   +  S+F  +    +++C SE+SLHL +S +F   N S E
Sbjct: 288 GIAKERQLLDGSECRSSFPQTFSECAKECTSEDSLHLRLSPSFPSINLSKE 338


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