BLASTX nr result

ID: Panax21_contig00028253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028253
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326659.1| predicted protein [Populus trichocarpa] gi|2...   210   9e-53
emb|CBI29498.3| unnamed protein product [Vitis vinifera]              206   1e-51
ref|XP_002274350.1| PREDICTED: transcription factor MYB1R1 [Viti...   206   1e-51
emb|CAN71598.1| hypothetical protein VITISV_010937 [Vitis vinifera]   206   1e-51
ref|XP_002304291.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51

>ref|XP_002326659.1| predicted protein [Populus trichocarpa] gi|222833981|gb|EEE72458.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  210 bits (535), Expect = 9e-53
 Identities = 99/128 (77%), Positives = 115/128 (89%)
 Frame = -3

Query: 395 PPALEEECESMESANSNDGDPAPPKPENSQYCYPVVYPAYLSPIVPFSFPFWSGCSSEQA 216
           PP L+EECESM+S NSN+G+P PPKP++SQ  YPVVYPAYLSP  P SFPFWSGCS+E +
Sbjct: 199 PPPLDEECESMDSTNSNEGEPLPPKPDSSQPAYPVVYPAYLSPFFPCSFPFWSGCSAEPS 258

Query: 215 KTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIGNAGPSSLSVQLLDGSSRQSAFHA 36
           KTE+HEVLKPTAVHSKSPINVD+LVGMSKLS+GESIG+ G SSLS++LL+G SRQSAFHA
Sbjct: 259 KTETHEVLKPTAVHSKSPINVDELVGMSKLSIGESIGDDGSSSLSLKLLEGPSRQSAFHA 318

Query: 35  SPASGSSG 12
           +PAS SSG
Sbjct: 319 NPASNSSG 326


>emb|CBI29498.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  206 bits (525), Expect = 1e-51
 Identities = 99/131 (75%), Positives = 112/131 (85%)
 Frame = -3

Query: 395 PPALEEECESMESANSNDGDPAPPKPENSQYCYPVVYPAYLSPIVPFSFPFWSGCSSEQA 216
           PPAL+EECESM+S NSNDG+P  PKP+  Q C PV+YP Y SP  PFSFPFW G SSE  
Sbjct: 186 PPALDEECESMDSTNSNDGEPPIPKPDGLQGCPPVIYPTYFSPFFPFSFPFWPGNSSEPT 245

Query: 215 KTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIGNAGPSSLSVQLLDGSSRQSAFHA 36
           K E+HEVLKPTAVHSKSPINVD+LVGMSKLSLGESIG+AGPSSL+++LL+GSSRQSAFHA
Sbjct: 246 KMETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGHAGPSSLTLKLLEGSSRQSAFHA 305

Query: 35  SPASGSSGRTS 3
           +PASGSS   S
Sbjct: 306 NPASGSSSMNS 316


>ref|XP_002274350.1| PREDICTED: transcription factor MYB1R1 [Vitis vinifera]
          Length = 335

 Score =  206 bits (525), Expect = 1e-51
 Identities = 99/131 (75%), Positives = 112/131 (85%)
 Frame = -3

Query: 395 PPALEEECESMESANSNDGDPAPPKPENSQYCYPVVYPAYLSPIVPFSFPFWSGCSSEQA 216
           PPAL+EECESM+S NSNDG+P  PKP+  Q C PV+YP Y SP  PFSFPFW G SSE  
Sbjct: 197 PPALDEECESMDSTNSNDGEPPIPKPDGLQGCPPVIYPTYFSPFFPFSFPFWPGNSSEPT 256

Query: 215 KTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIGNAGPSSLSVQLLDGSSRQSAFHA 36
           K E+HEVLKPTAVHSKSPINVD+LVGMSKLSLGESIG+AGPSSL+++LL+GSSRQSAFHA
Sbjct: 257 KMETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGHAGPSSLTLKLLEGSSRQSAFHA 316

Query: 35  SPASGSSGRTS 3
           +PASGSS   S
Sbjct: 317 NPASGSSSMNS 327


>emb|CAN71598.1| hypothetical protein VITISV_010937 [Vitis vinifera]
          Length = 315

 Score =  206 bits (525), Expect = 1e-51
 Identities = 99/131 (75%), Positives = 112/131 (85%)
 Frame = -3

Query: 395 PPALEEECESMESANSNDGDPAPPKPENSQYCYPVVYPAYLSPIVPFSFPFWSGCSSEQA 216
           PPAL+EECESM+S NSNDG+P  PKP+  Q C PV+YP Y SP  PFSFPFW G SSE  
Sbjct: 177 PPALDEECESMDSTNSNDGEPPIPKPDGLQGCPPVIYPTYFSPFFPFSFPFWPGNSSEPT 236

Query: 215 KTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIGNAGPSSLSVQLLDGSSRQSAFHA 36
           K E+HEVLKPTAVHSKSPINVD+LVGMSKLSLGESIG+AGPSSL+++LL+GSSRQSAFHA
Sbjct: 237 KMETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGHAGPSSLTLKLLEGSSRQSAFHA 296

Query: 35  SPASGSSGRTS 3
           +PASGSS   S
Sbjct: 297 NPASGSSSMNS 307


>ref|XP_002304291.1| predicted protein [Populus trichocarpa] gi|222841723|gb|EEE79270.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  206 bits (523), Expect = 2e-51
 Identities = 99/129 (76%), Positives = 111/129 (86%)
 Frame = -3

Query: 401 LPPPALEEECESMESANSNDGDPAPPKPENSQYCYPVVYPAYLSPIVPFSFPFWSGCSSE 222
           +P P L+EECESM+S NSNDG+P PPKP+ SQ  YPVVYP+Y SP  PFSFPFWSG S+E
Sbjct: 196 VPVPPLDEECESMDSTNSNDGEPPPPKPDCSQSAYPVVYPSYFSPFFPFSFPFWSGHSAE 255

Query: 221 QAKTESHEVLKPTAVHSKSPINVDKLVGMSKLSLGESIGNAGPSSLSVQLLDGSSRQSAF 42
             KTE+HEVLKPTAVHSKSPINVD+LVGMSKLSLGESIG  GPSSLS +LL+GS RQSAF
Sbjct: 256 PTKTETHEVLKPTAVHSKSPINVDELVGMSKLSLGESIGQDGPSSLSQKLLEGSPRQSAF 315

Query: 41  HASPASGSS 15
           HA+PAS SS
Sbjct: 316 HANPASNSS 324


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