BLASTX nr result
ID: Panax21_contig00028248
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00028248 (684 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding prote... 196 5e-48 ref|XP_002324286.1| predicted protein [Populus trichocarpa] gi|2... 190 2e-46 ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|1... 186 4e-45 ref|XP_004152212.1| PREDICTED: uncharacterized RNA-binding prote... 185 8e-45 gb|AAZ94630.1| zinc finger protein-like protein [Gossypium hirsu... 184 1e-44 >ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis vinifera] gi|296082008|emb|CBI21013.3| unnamed protein product [Vitis vinifera] Length = 158 Score = 196 bits (497), Expect = 5e-48 Identities = 93/161 (57%), Positives = 100/161 (62%), Gaps = 1/161 (0%) Frame = +2 Query: 83 MSRPGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXXXXXXXXXXXXXXXXPDVR 262 MSRPGDWNCRSCQ+LNFQRRDSCQRCGEPR PDVR Sbjct: 1 MSRPGDWNCRSCQYLNFQRRDSCQRCGEPR-----PGDRGDYGGFSRGSSSFGFTGPDVR 55 Query: 263 PGDWYCNIGNCGAHNFASRSSCFKCGAFKDE-XXXXXXXXXXXXXXXXXXXXXXXXXXXX 439 PGDWYC IGNCGAHNFASRSSCFKCG KDE Sbjct: 56 PGDWYCTIGNCGAHNFASRSSCFKCGGLKDESSGGYEGDMSRPRGFGFGSGGSSGSGIGR 115 Query: 440 XXWKSGDWICSRTGCNEHNFASRMECFRCNAPREPGSRSTY 562 WKSGDWIC+R+GCNEHNFASRMECFRCNAPR+ G++S+Y Sbjct: 116 SGWKSGDWICNRSGCNEHNFASRMECFRCNAPRDSGNKSSY 156 >ref|XP_002324286.1| predicted protein [Populus trichocarpa] gi|222865720|gb|EEF02851.1| predicted protein [Populus trichocarpa] Length = 155 Score = 190 bits (483), Expect = 2e-46 Identities = 92/161 (57%), Positives = 100/161 (62%), Gaps = 1/161 (0%) Frame = +2 Query: 83 MSRPGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXXXXXXXXXXXXXXXXPDVR 262 MSRPGDWNCRSCQHLNFQRRDSCQRCG+PR PDVR Sbjct: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDPR----PGERDHYGSFGGRSGGSFGFTGPDVR 56 Query: 263 PGDWYCNIGNCGAHNFASRSSCFKCGAFKDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 442 PGDWYC++GNCGAHNFASRSSCFKCG KDE Sbjct: 57 PGDWYCSVGNCGAHNFASRSSCFKCGMSKDE--SSGGGLDADISWMRGYGFGGGSASSRS 114 Query: 443 XWKSGDWICSRTGCNEHNFASRMECFRCNAPREPGS-RSTY 562 WKSGDWIC+R+GCNEHNFASR EC+RCNAPRE GS +S+Y Sbjct: 115 NWKSGDWICTRSGCNEHNFASRTECYRCNAPRESGSNKSSY 155 >ref|XP_002308653.1| predicted protein [Populus trichocarpa] gi|118482028|gb|ABK92945.1| unknown [Populus trichocarpa] gi|222854629|gb|EEE92176.1| predicted protein [Populus trichocarpa] Length = 159 Score = 186 bits (472), Expect = 4e-45 Identities = 91/162 (56%), Positives = 97/162 (59%), Gaps = 2/162 (1%) Frame = +2 Query: 83 MSRPGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXXXXXXXXXXXXXXXXPDVR 262 MSRPGDWNCRSCQHLNFQRRDSCQRCG+PR PDVR Sbjct: 1 MSRPGDWNCRSCQHLNFQRRDSCQRCGDPR---PGERDHYGSFGGRSSGGSFGFTGPDVR 57 Query: 263 PGDWYCNIGNCGAHNFASRSSCFKCGAFKDE-XXXXXXXXXXXXXXXXXXXXXXXXXXXX 439 PGDWYC GNCGAHNFASRSSCFKCG KDE Sbjct: 58 PGDWYCTAGNCGAHNFASRSSCFKCGVSKDESSGGGLDADMSRMRGYGFGGGGGGGSGSS 117 Query: 440 XXWKSGDWICSRTGCNEHNFASRMECFRCNAPREPGS-RSTY 562 WKSGDWIC+R+GCNEHNFASR EC+RCNAPRE S +S+Y Sbjct: 118 RNWKSGDWICTRSGCNEHNFASRTECYRCNAPRESSSNKSSY 159 >ref|XP_004152212.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like [Cucumis sativus] gi|449530863|ref|XP_004172411.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like [Cucumis sativus] Length = 146 Score = 185 bits (469), Expect = 8e-45 Identities = 87/154 (56%), Positives = 95/154 (61%), Gaps = 1/154 (0%) Frame = +2 Query: 83 MSRPGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXXXXXXXXXXXXXXXXPDVR 262 MSRPGDWNCRSCQHLNFQRRD CQRCGEP+ DVR Sbjct: 1 MSRPGDWNCRSCQHLNFQRRDMCQRCGEPKSGGGIGRGGSGFGYGGS----------DVR 50 Query: 263 PGDWYCNIGNCGAHNFASRSSCFKCGAFKDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 442 PGDWYC++GNCGAHNFASRSSCFKCGAFKD+ Sbjct: 51 PGDWYCSVGNCGAHNFASRSSCFKCGAFKDDMSAFDFDIPRRSPRGISPFAFPSPARTAA 110 Query: 443 X-WKSGDWICSRTGCNEHNFASRMECFRCNAPRE 541 WKSGDWIC+R+GCNEHNFASRMECFRC+APR+ Sbjct: 111 SAWKSGDWICARSGCNEHNFASRMECFRCSAPRD 144 >gb|AAZ94630.1| zinc finger protein-like protein [Gossypium hirsutum] Length = 139 Score = 184 bits (468), Expect = 1e-44 Identities = 88/160 (55%), Positives = 96/160 (60%) Frame = +2 Query: 83 MSRPGDWNCRSCQHLNFQRRDSCQRCGEPRHXXXXXXXXXXXXXXXXXXXXXXXXXPDVR 262 MSRPGDWNCRSCQHLNFQRRD+CQRCGE R+ DVR Sbjct: 1 MSRPGDWNCRSCQHLNFQRRDNCQRCGESRYGVRVGSTFGFTAGS------------DVR 48 Query: 263 PGDWYCNIGNCGAHNFASRSSCFKCGAFKDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 442 PGDWYC GNCG HNFASRS+CF CGAFKDE Sbjct: 49 PGDWYCTAGNCGTHNFASRSTCFNCGAFKDE---------SAGGFDLDMSRSRGFGGNRS 99 Query: 443 XWKSGDWICSRTGCNEHNFASRMECFRCNAPREPGSRSTY 562 WKSGDWIC+R GCNEHNFASRMECFRC+APRE +R++Y Sbjct: 100 GWKSGDWICTRLGCNEHNFASRMECFRCSAPREFNNRTSY 139