BLASTX nr result

ID: Panax21_contig00028211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028211
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633451.1| PREDICTED: probable disease resistance prote...    74   1e-11
emb|CAN75122.1| hypothetical protein VITISV_040991 [Vitis vinifera]    72   5e-11
emb|CBI25487.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002271551.2| PREDICTED: probable disease resistance RPP8-...    67   2e-09
ref|XP_002271883.2| PREDICTED: probable disease resistance RPP8-...    65   4e-09

>ref|XP_003633451.1| PREDICTED: probable disease resistance protein RDL6/RF9-like [Vitis
           vinifera]
          Length = 955

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
 Frame = +1

Query: 79  IANFRLLRVFLFEGFSYVDKAYSLKVVVPAIRYLIKLPKVLGTLVHLRYLSLRETIMLKF 258
           + NF+LLRV   EG S  +K                LP+ +G L+HL+YLSL+   +L F
Sbjct: 601 LKNFKLLRVLSLEGLSLEEK----------------LPRAIGNLIHLKYLSLKYAKLLCF 644

Query: 259 PTFIENLEQLQTLDLRFRGGIFYLSCS-AKHIVPKMEHLQHLYLPYYDDIVDDK 417
           P+ I NL  +QTLDLRF   +  ++CS  + ++ +M+ L+HL LP Y ++ D K
Sbjct: 645 PSSIRNLSCIQTLDLRF-VSVHRVTCSKVRDVIGRMKWLRHLCLPQYLNMDDSK 697


>emb|CAN75122.1| hypothetical protein VITISV_040991 [Vitis vinifera]
          Length = 1843

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
 Frame = +1

Query: 79  IANFRLLRVFLFEGFSYVDKAYSLKVVVPAIRYLIKLPKVLGTLVHLRYLSLRETIMLKF 258
           + NF+LLRV   EG S  +K                LP+ +G L+HL+YLSL+   +L F
Sbjct: 609 LKNFKLLRVLSLEGLSLEEK----------------LPRAIGNLIHLKYLSLKYAKLLCF 652

Query: 259 PTFIENLEQLQTLDLRFRGGIFYLSCS-AKHIVPKMEHLQHLYLPYYDDIVDDK 417
           P+ I  L  +QTLDLRF   +  ++CS  + ++ +M+ L+HL LP Y +I D K
Sbjct: 653 PSSIRYLSCIQTLDLRF-VSVHRVTCSKVRDVIGRMKWLRHLCLPQYLNIDDSK 705



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 47/134 (35%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
 Frame = +1

Query: 1    LRSVLLFSVGGWRMERSPPIFRILNQI--ANFRLLRVFLFEGFSYVDKAYSLKVVVPAIR 174
            LRS+L+FS     M  S  I  +L +    NF+LLRV   E     +             
Sbjct: 1583 LRSLLIFS-----MRDSSVIPWVLRKTDWKNFKLLRVLSLEELILEEN------------ 1625

Query: 175  YLIKLPKVLGTLVHLRYLSLRETIMLKFPTFIENLEQLQTLDLRFR--GGIFYLSCSAKH 348
                +PK LG L+H +YLSL+   +  FP+ I NL  +QTLDLRF    G          
Sbjct: 1626 ----IPKALGNLIHWKYLSLKFASLPSFPSSIRNLGCIQTLDLRFYCVDGQPINCFGINK 1681

Query: 349  IVPKMEHLQHLYLP 390
            ++ +M+ L+HLYLP
Sbjct: 1682 VIGRMKWLRHLYLP 1695


>emb|CBI25487.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
 Frame = +1

Query: 79  IANFRLLRVFLFEGFSYVDKAYSLKVVVPAIRYLIKLPKVLGTLVHLRYLSLRETIMLKF 258
           I NF+LLRV   E     +                 +P+ LG L+HL+YLSL+   +  F
Sbjct: 552 IYNFKLLRVLSLEELLLEEN----------------IPEALGNLIHLKYLSLKSASLPSF 595

Query: 259 PTFIENLEQLQTLDLRFRGGIFY---LSC-SAKHIVPKMEHLQHLYLPYYDDIVDDKGKL 426
           P+FI NL  +QTLDLRF         ++C     ++ +M+ L+HLYLP Y  + D K +L
Sbjct: 596 PSFIRNLGCIQTLDLRFYSAADADQPINCFGLNKVIGRMKCLRHLYLPMYLKVDDSKVQL 655


>ref|XP_002271551.2| PREDICTED: probable disease resistance RPP8-like protein 2-like
           [Vitis vinifera]
          Length = 970

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
 Frame = +1

Query: 1   LRSVLLFSVGGWRMERSPPIFRILNQI--ANFRLLRVFLFEGFSYVDKAYSLKVVVPAIR 174
           LRS+L F       + S  I ++L      NF+LLRV   E     +             
Sbjct: 588 LRSLLTFDT-----QYSSIIPKVLRNTDWKNFKLLRVLSLEELLLEEN------------ 630

Query: 175 YLIKLPKVLGTLVHLRYLSLRETIMLKFPTFIENLEQLQTLDLRFRGGIFY---LSC-SA 342
               +P+ LG L+HL+YLSL+   +  FP+FI NL  +QTLDLRF         ++C   
Sbjct: 631 ----IPEALGNLIHLKYLSLKSASLPSFPSFIRNLGCIQTLDLRFYSAADADQPINCFGL 686

Query: 343 KHIVPKMEHLQHLYLPYYDDIVDDKGKL 426
             ++ +M+ L+HLYLP Y  + D K +L
Sbjct: 687 NKVIGRMKCLRHLYLPMYLKVDDSKVQL 714


>ref|XP_002271883.2| PREDICTED: probable disease resistance RPP8-like protein 2-like
           [Vitis vinifera]
          Length = 1344

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = +1

Query: 79  IANFRLLRVFLFEGFSYVDKAYSLKVVVPAIRYLIKLPKVLGTLVHLRYLSLRETIMLKF 258
           + NF+LLRV   E  S  +K                L + +G L+HL+YLS R+  +L F
Sbjct: 614 LKNFKLLRVLSLERLSLEEK----------------LLREIGNLIHLKYLSFRDAKLLSF 657

Query: 259 PTFIENLEQLQTLDLRFRGGIFYLSCS-AKHIVPKMEHLQHLYLPYY 396
           P+ I+NL  +QTLDLRF      ++C+    ++  M+ L+HLYLP Y
Sbjct: 658 PSSIKNLGCIQTLDLRFCNDDNLVTCTKIGDVICMMKLLRHLYLPRY 704


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