BLASTX nr result

ID: Panax21_contig00028197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028197
         (1433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631332.1| PREDICTED: LOW QUALITY PROTEIN: 4-coumarate-...   335   e-142
emb|CBI27665.3| unnamed protein product [Vitis vinifera]              335   e-142
emb|CAN77428.1| hypothetical protein VITISV_001737 [Vitis vinifera]   335   e-142
gb|AAO25511.1| 4-coumarate:CoA ligase-like [Nicotiana sylvestris...   332   e-139
ref|XP_002297838.1| acyl:coa ligase [Populus trichocarpa] gi|222...   335   e-138

>ref|XP_003631332.1| PREDICTED: LOW QUALITY PROTEIN: 4-coumarate--CoA ligase-like 1-like
            [Vitis vinifera]
          Length = 568

 Score =  335 bits (860), Expect(2) = e-142
 Identities = 164/241 (68%), Positives = 192/241 (79%)
 Frame = +2

Query: 710  QQVKGLGLPVIVVGEERVEGTIYWNELLEAATRASDSIMNEAIQQTDICALPFSSGTTGL 889
            ++VK L LPVIV+GEE V G I W ELLEAA RA+   ++E + Q D+CALPFSSGTTG+
Sbjct: 153  EKVKSLELPVIVMGEEHVAGAINWGELLEAADRANTDTISEDVHQNDLCALPFSSGTTGI 212

Query: 890  SKGVMLSHRNLVANLCSSLFSVGPELIGNVTTLGLIPFFHIYGLAGICCAALRNKGKVVV 1069
            SKGVML+HRNLVANLCS+LFSVGPE++G +T LGL+PFFHIYG+ GICCA LRNKGKVVV
Sbjct: 213  SKGVMLTHRNLVANLCSTLFSVGPEMVGQITILGLMPFFHIYGITGICCATLRNKGKVVV 272

Query: 1070 MGRYELRAFISALIKHEVTFAPIVPPIILGLVKNPIVNEFDLSKIKLRSIMTAAAPLAPE 1249
            +GRYELR F++ALI HE+TFAPIVPPIIL LVKNPIV EFDLS++KLR++MTAAAPLAPE
Sbjct: 273  IGRYELRTFLNALITHEITFAPIVPPIILALVKNPIVEEFDLSRLKLRAVMTAAAPLAPE 332

Query: 1250 ILTEFEKKFPDVVVQQVISYSLAILHCRL*I*FVFRCQAYGMTEHSCITLTHGDPNKGHG 1429
            +L+ FEKKFP V VQ                      +AYG+TEHSCITLTHGDP KGH 
Sbjct: 333  LLSAFEKKFPSVQVQ----------------------EAYGLTEHSCITLTHGDPTKGHA 370

Query: 1430 T 1432
            T
Sbjct: 371  T 371



 Score =  198 bits (503), Expect(2) = e-142
 Identities = 96/132 (72%), Positives = 115/132 (87%)
 Frame = +3

Query: 258 QRIFRSRYPSVPIPDNTTLPEFVLGNAELYAEKVAFVDALTGKEYTHGQVVRDVKRFAKA 437
           + IFRS++ +VP+PDN TLP+FVL +AELYAEKVAFV+A+TGKEYT+G+VVRDV+RFAKA
Sbjct: 26  EHIFRSQHQAVPVPDNMTLPDFVLQDAELYAEKVAFVEAVTGKEYTYGEVVRDVRRFAKA 85

Query: 438 LRSLGLRKGNVVMVALPNIVEYPIVALGIMAAGGVFSGGNPSAHVSEIKKQADAADAKSI 617
           LRS+GLRKG VV+V LPN+ EY IVALGIMAAGGVFSG NP+ H SEIKKQ +AADAK +
Sbjct: 86  LRSIGLRKGRVVVVVLPNVAEYAIVALGIMAAGGVFSGANPAGHASEIKKQVEAADAKLV 145

Query: 618 VTDAVTYEKVHS 653
           VT+   YEKV S
Sbjct: 146 VTNGAMYEKVKS 157


>emb|CBI27665.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  335 bits (860), Expect(2) = e-142
 Identities = 164/241 (68%), Positives = 192/241 (79%)
 Frame = +2

Query: 710  QQVKGLGLPVIVVGEERVEGTIYWNELLEAATRASDSIMNEAIQQTDICALPFSSGTTGL 889
            ++VK L LPVIV+GEE V G I W ELLEAA RA+   ++E + Q D+CALPFSSGTTG+
Sbjct: 140  EKVKSLELPVIVMGEEHVAGAINWGELLEAADRANTDTISEDVHQNDLCALPFSSGTTGI 199

Query: 890  SKGVMLSHRNLVANLCSSLFSVGPELIGNVTTLGLIPFFHIYGLAGICCAALRNKGKVVV 1069
            SKGVML+HRNLVANLCS+LFSVGPE++G +T LGL+PFFHIYG+ GICCA LRNKGKVVV
Sbjct: 200  SKGVMLTHRNLVANLCSTLFSVGPEMVGQITILGLMPFFHIYGITGICCATLRNKGKVVV 259

Query: 1070 MGRYELRAFISALIKHEVTFAPIVPPIILGLVKNPIVNEFDLSKIKLRSIMTAAAPLAPE 1249
            +GRYELR F++ALI HE+TFAPIVPPIIL LVKNPIV EFDLS++KLR++MTAAAPLAPE
Sbjct: 260  IGRYELRTFLNALITHEITFAPIVPPIILALVKNPIVEEFDLSRLKLRAVMTAAAPLAPE 319

Query: 1250 ILTEFEKKFPDVVVQQVISYSLAILHCRL*I*FVFRCQAYGMTEHSCITLTHGDPNKGHG 1429
            +L+ FEKKFP V VQ                      +AYG+TEHSCITLTHGDP KGH 
Sbjct: 320  LLSAFEKKFPSVQVQ----------------------EAYGLTEHSCITLTHGDPTKGHA 357

Query: 1430 T 1432
            T
Sbjct: 358  T 358



 Score =  198 bits (503), Expect(2) = e-142
 Identities = 96/132 (72%), Positives = 115/132 (87%)
 Frame = +3

Query: 258 QRIFRSRYPSVPIPDNTTLPEFVLGNAELYAEKVAFVDALTGKEYTHGQVVRDVKRFAKA 437
           + IFRS++ +VP+PDN TLP+FVL +AELYAEKVAFV+A+TGKEYT+G+VVRDV+RFAKA
Sbjct: 13  EHIFRSQHQAVPVPDNMTLPDFVLQDAELYAEKVAFVEAVTGKEYTYGEVVRDVRRFAKA 72

Query: 438 LRSLGLRKGNVVMVALPNIVEYPIVALGIMAAGGVFSGGNPSAHVSEIKKQADAADAKSI 617
           LRS+GLRKG VV+V LPN+ EY IVALGIMAAGGVFSG NP+ H SEIKKQ +AADAK +
Sbjct: 73  LRSIGLRKGRVVVVVLPNVAEYAIVALGIMAAGGVFSGANPAGHASEIKKQVEAADAKLV 132

Query: 618 VTDAVTYEKVHS 653
           VT+   YEKV S
Sbjct: 133 VTNGAMYEKVKS 144


>emb|CAN77428.1| hypothetical protein VITISV_001737 [Vitis vinifera]
          Length = 527

 Score =  335 bits (859), Expect(2) = e-142
 Identities = 164/241 (68%), Positives = 192/241 (79%)
 Frame = +2

Query: 710  QQVKGLGLPVIVVGEERVEGTIYWNELLEAATRASDSIMNEAIQQTDICALPFSSGTTGL 889
            ++VK L LPVIV+GEE V G I W ELLEAA RA+   ++E + Q D+CALPFSSGTTG+
Sbjct: 140  EKVKSLELPVIVMGEEXVAGAINWGELLEAADRANTDTISEDVHQNDLCALPFSSGTTGI 199

Query: 890  SKGVMLSHRNLVANLCSSLFSVGPELIGNVTTLGLIPFFHIYGLAGICCAALRNKGKVVV 1069
            SKGVML+HRNLVANLCS+LFSVGPE++G +T LGL+PFFHIYG+ GICCA LRNKGKVVV
Sbjct: 200  SKGVMLTHRNLVANLCSTLFSVGPEMVGQITILGLMPFFHIYGITGICCATLRNKGKVVV 259

Query: 1070 MGRYELRAFISALIKHEVTFAPIVPPIILGLVKNPIVNEFDLSKIKLRSIMTAAAPLAPE 1249
            +GRYELR F++ALI HE+TFAPIVPPIIL LVKNPIV EFDLS++KLR++MTAAAPLAPE
Sbjct: 260  IGRYELRTFLNALITHEITFAPIVPPIILALVKNPIVEEFDLSRLKLRAVMTAAAPLAPE 319

Query: 1250 ILTEFEKKFPDVVVQQVISYSLAILHCRL*I*FVFRCQAYGMTEHSCITLTHGDPNKGHG 1429
            +L+ FEKKFP V VQ                      +AYG+TEHSCITLTHGDP KGH 
Sbjct: 320  LLSAFEKKFPSVQVQ----------------------EAYGLTEHSCITLTHGDPTKGHA 357

Query: 1430 T 1432
            T
Sbjct: 358  T 358



 Score =  198 bits (503), Expect(2) = e-142
 Identities = 96/132 (72%), Positives = 115/132 (87%)
 Frame = +3

Query: 258 QRIFRSRYPSVPIPDNTTLPEFVLGNAELYAEKVAFVDALTGKEYTHGQVVRDVKRFAKA 437
           + IFRS++ +VP+PDN TLP+FVL +AELYAEKVAFV+A+TGKEYT+G+VVRDV+RFAKA
Sbjct: 13  EHIFRSQHQAVPVPDNMTLPDFVLQDAELYAEKVAFVEAVTGKEYTYGEVVRDVRRFAKA 72

Query: 438 LRSLGLRKGNVVMVALPNIVEYPIVALGIMAAGGVFSGGNPSAHVSEIKKQADAADAKSI 617
           LRS+GLRKG VV+V LPN+ EY IVALGIMAAGGVFSG NP+ H SEIKKQ +AADAK +
Sbjct: 73  LRSIGLRKGRVVVVVLPNVAEYAIVALGIMAAGGVFSGANPAGHASEIKKQVEAADAKLV 132

Query: 618 VTDAVTYEKVHS 653
           VT+   YEKV S
Sbjct: 133 VTNGAMYEKVKS 144


>gb|AAO25511.1| 4-coumarate:CoA ligase-like [Nicotiana sylvestris]
            gi|28628067|gb|AAO25512.1| 4-coumarate:CoA ligase-like
            [Nicotiana sylvestris]
          Length = 551

 Score =  332 bits (852), Expect(2) = e-139
 Identities = 172/239 (71%), Positives = 193/239 (80%), Gaps = 6/239 (2%)
 Frame = +2

Query: 713  QVKGLGLPVIVVGEERVEGTIYWNELLEAATRA---SDSIMN---EAIQQTDICALPFSS 874
            +VK  GLPVI++GEE VEGTI+W+ELLEAA RA   +D I N   E +QQ D+CALPFSS
Sbjct: 143  KVKDCGLPVIILGEEHVEGTIHWDELLEAAERAGSRTDHITNHEDEMVQQNDLCALPFSS 202

Query: 875  GTTGLSKGVMLSHRNLVANLCSSLFSVGPELIGNVTTLGLIPFFHIYGLAGICCAALRNK 1054
            GTTGLSKGVML+HRNLVANLCS+LFSV PE++G VTTLGLIPFFHIYG+ GICCA +RNK
Sbjct: 203  GTTGLSKGVMLTHRNLVANLCSTLFSVSPEMVGQVTTLGLIPFFHIYGITGICCATIRNK 262

Query: 1055 GKVVVMGRYELRAFISALIKHEVTFAPIVPPIILGLVKNPIVNEFDLSKIKLRSIMTAAA 1234
            GKVVV+ RYELRAF++ALI HEVTFAPIVPPIIL LVKNPIV+EFDLSK+KLRSIMTAAA
Sbjct: 263  GKVVVLRRYELRAFLNALITHEVTFAPIVPPIILALVKNPIVDEFDLSKLKLRSIMTAAA 322

Query: 1235 PLAPEILTEFEKKFPDVVVQQVISYSLAILHCRL*I*FVFRCQAYGMTEHSCITLTHGD 1411
            PLAPEIL EFEKKFPDV VQ                      +AYGMTEHSCITL+H D
Sbjct: 323  PLAPEILNEFEKKFPDVQVQ----------------------EAYGMTEHSCITLSHSD 359



 Score =  189 bits (480), Expect(2) = e-139
 Identities = 93/130 (71%), Positives = 107/130 (82%)
 Frame = +3

Query: 258 QRIFRSRYPSVPIPDNTTLPEFVLGNAELYAEKVAFVDALTGKEYTHGQVVRDVKRFAKA 437
           + IFRSRYP V +PDN TLP+FVL N ELY +K+AFVDA TGK YT+GQV RD++RFAKA
Sbjct: 15  EHIFRSRYPPVQVPDNVTLPDFVLHNVELYTDKMAFVDATTGKGYTYGQVARDIRRFAKA 74

Query: 438 LRSLGLRKGNVVMVALPNIVEYPIVALGIMAAGGVFSGGNPSAHVSEIKKQADAADAKSI 617
           LRSLGLRKG VV+V LPN+ EY IVALGIMAAGGVFSG NP+AH SEI KQ ++AD K I
Sbjct: 75  LRSLGLRKGRVVVVVLPNVPEYAIVALGIMAAGGVFSGANPAAHSSEIVKQVESADGKLI 134

Query: 618 VTDAVTYEKV 647
           V+D  TY KV
Sbjct: 135 VSDLPTYHKV 144


>ref|XP_002297838.1| acyl:coa ligase [Populus trichocarpa] gi|222845096|gb|EEE82643.1|
            acyl:coa ligase [Populus trichocarpa]
          Length = 545

 Score =  335 bits (859), Expect(2) = e-138
 Identities = 166/239 (69%), Positives = 192/239 (80%)
 Frame = +2

Query: 713  QVKGLGLPVIVVGEERVEGTIYWNELLEAATRASDSIMNEAIQQTDICALPFSSGTTGLS 892
            +VKGLGLPVIV+GE  +   + WNELL+AA RA D++  E + Q+D+CALPFSSGTTG+S
Sbjct: 139  KVKGLGLPVIVLGEVCISTAVNWNELLDAADRAGDTLAYEEVLQSDLCALPFSSGTTGMS 198

Query: 893  KGVMLSHRNLVANLCSSLFSVGPELIGNVTTLGLIPFFHIYGLAGICCAALRNKGKVVVM 1072
            KGVML+HRNLVANLCSSLFSVGPE++G V TLGLIPFFHIYG+ GICCA LRNKGKVVVM
Sbjct: 199  KGVMLTHRNLVANLCSSLFSVGPEMVGQVATLGLIPFFHIYGITGICCATLRNKGKVVVM 258

Query: 1073 GRYELRAFISALIKHEVTFAPIVPPIILGLVKNPIVNEFDLSKIKLRSIMTAAAPLAPEI 1252
            GR+ELR F++ALI  EV+FAPIVPPIIL LVKNPIV EFDLSK+KL++IMTAAAPLAPE+
Sbjct: 259  GRFELRTFLNALITQEVSFAPIVPPIILALVKNPIVEEFDLSKLKLKAIMTAAAPLAPEL 318

Query: 1253 LTEFEKKFPDVVVQQVISYSLAILHCRL*I*FVFRCQAYGMTEHSCITLTHGDPNKGHG 1429
            LT FE KFP V VQ                      +AYG+TEHSCITLTHGDP+KGHG
Sbjct: 319  LTAFENKFPGVQVQ----------------------EAYGLTEHSCITLTHGDPSKGHG 355



 Score =  184 bits (468), Expect(2) = e-138
 Identities = 94/131 (71%), Positives = 114/131 (87%)
 Frame = +3

Query: 255 EQRIFRSRYPSVPIPDNTTLPEFVLGNAELYAEKVAFVDALTGKEYTHGQVVRDVKRFAK 434
           E+ IFRSR+P+V +PD  TLP+FVL +AELYA+KVAFV+A TGK +T+ +VVRD +RFAK
Sbjct: 11  EEHIFRSRHPAVLVPD-ITLPDFVLQDAELYADKVAFVEAATGKTFTYAEVVRDTRRFAK 69

Query: 435 ALRSLGLRKGNVVMVALPNIVEYPIVALGIMAAGGVFSGGNPSAHVSEIKKQADAADAKS 614
           ALRSLGLRKG+VV+VALPN+ EY IVALGIMAAGGVFSG NP+AH SE+KKQA+AADAK 
Sbjct: 70  ALRSLGLRKGHVVVVALPNVAEYGIVALGIMAAGGVFSGANPTAHESELKKQAEAADAKL 129

Query: 615 IVTDAVTYEKV 647
           IVT+ + Y KV
Sbjct: 130 IVTNDLNYGKV 140


Top