BLASTX nr result

ID: Panax21_contig00028189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028189
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301073.1| predicted protein [Populus trichocarpa] gi|2...   384   e-105
gb|ABK95128.1| unknown [Populus trichocarpa]                          384   e-105
ref|XP_003602835.1| Seryl-tRNA synthetase [Medicago truncatula] ...   380   e-103
ref|XP_003602834.1| Seryl-tRNA synthetase [Medicago truncatula] ...   380   e-103
ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis...   377   e-102

>ref|XP_002301073.1| predicted protein [Populus trichocarpa] gi|222842799|gb|EEE80346.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score =  384 bits (986), Expect = e-105
 Identities = 184/213 (86%), Positives = 198/213 (92%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   VSGSKFYYLKNEAVMLEMALINWTLSKVMKKGFTPFTTPEIARSSIVKKCGFQPRATNTQ 182
           VSGSKFYYLKNEAVMLEMAL+NWTLS+VMKKGFTP TTPE+ RSS+V+KCGFQPR  NTQ
Sbjct: 241 VSGSKFYYLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQ 300

Query: 183 VYSIEGSDQCLIGTAEIPLGGIHMDSILEDSSLPLKYVAFSHCFRTEAG-AGTTARGLYR 359
           VYSIEGSDQCLIGTAEIP+GGIHMD+IL ++ LPLKYVA+SHCFRTEAG AGT  RGLYR
Sbjct: 301 VYSIEGSDQCLIGTAEIPVGGIHMDAILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYR 360

Query: 360 VHQFSKVEMFILCRPEESDFYHEELIGIEEDLFSSLGFHFKTLDMALGDLGAPAYRKLDV 539
           VHQF+KVEMF+LCRPEESD YHEELI IEEDLFS+LG H+KTLDMA GDLGAPAYRK DV
Sbjct: 361 VHQFTKVEMFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTLDMASGDLGAPAYRKFDV 420

Query: 540 EAWMPGLGRYGEISSASNCTDYQSRRLGIRYRP 638
           EAWMPGLGRYGEISSASNC DYQSRRLGIRYRP
Sbjct: 421 EAWMPGLGRYGEISSASNCIDYQSRRLGIRYRP 453


>gb|ABK95128.1| unknown [Populus trichocarpa]
          Length = 523

 Score =  384 bits (986), Expect = e-105
 Identities = 184/213 (86%), Positives = 198/213 (92%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   VSGSKFYYLKNEAVMLEMALINWTLSKVMKKGFTPFTTPEIARSSIVKKCGFQPRATNTQ 182
           VSGSKFYYLKNEAVMLEMAL+NWTLS+VMKKGFTP TTPE+ RSS+V+KCGFQPR  NTQ
Sbjct: 241 VSGSKFYYLKNEAVMLEMALVNWTLSEVMKKGFTPLTTPELVRSSVVEKCGFQPRGDNTQ 300

Query: 183 VYSIEGSDQCLIGTAEIPLGGIHMDSILEDSSLPLKYVAFSHCFRTEAG-AGTTARGLYR 359
           VYSIEGSDQCLIGTAEIP+GGIHMD+IL ++ LPLKYVA+SHCFRTEAG AGT  RGLYR
Sbjct: 301 VYSIEGSDQCLIGTAEIPVGGIHMDTILAETQLPLKYVAYSHCFRTEAGAAGTATRGLYR 360

Query: 360 VHQFSKVEMFILCRPEESDFYHEELIGIEEDLFSSLGFHFKTLDMALGDLGAPAYRKLDV 539
           VHQF+KVEMF+LCRPEESD YHEELI IEEDLFS+LG H+KTLDMA GDLGAPAYRK DV
Sbjct: 361 VHQFTKVEMFVLCRPEESDSYHEELIKIEEDLFSALGLHYKTLDMASGDLGAPAYRKFDV 420

Query: 540 EAWMPGLGRYGEISSASNCTDYQSRRLGIRYRP 638
           EAWMPGLGRYGEISSASNC DYQSRRLGIRYRP
Sbjct: 421 EAWMPGLGRYGEISSASNCIDYQSRRLGIRYRP 453


>ref|XP_003602835.1| Seryl-tRNA synthetase [Medicago truncatula]
           gi|355491883|gb|AES73086.1| Seryl-tRNA synthetase
           [Medicago truncatula]
          Length = 379

 Score =  380 bits (975), Expect = e-103
 Identities = 183/213 (85%), Positives = 197/213 (92%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   VSGSKFYYLKNEAVMLEMALINWTLSKVMKKGFTPFTTPEIARSSIVKKCGFQPRATNTQ 182
           VSGSKFYYLKNEAV+LEMAL+NWTLS+VMK+GFTP TTPEI RSS+V+KCGFQPRA NTQ
Sbjct: 98  VSGSKFYYLKNEAVLLEMALLNWTLSEVMKRGFTPLTTPEIVRSSVVEKCGFQPRAKNTQ 157

Query: 183 VYSIEGSDQCLIGTAEIPLGGIHMDSILEDSSLPLKYVAFSHCFRTEAG-AGTTARGLYR 359
           VYSI+ SDQCLIGTAEIP+GG+HMDSIL +S LPLKYVAFSHCFRTEAG AGT  RGLYR
Sbjct: 158 VYSIDDSDQCLIGTAEIPVGGLHMDSILAESMLPLKYVAFSHCFRTEAGAAGTATRGLYR 217

Query: 360 VHQFSKVEMFILCRPEESDFYHEELIGIEEDLFSSLGFHFKTLDMALGDLGAPAYRKLDV 539
           VHQFSK+EMFI CRPEESD+YHEELI IEED+FSSLG HFKTLDMA  DLGAPAYRK DV
Sbjct: 218 VHQFSKIEMFIFCRPEESDYYHEELIKIEEDMFSSLGLHFKTLDMASEDLGAPAYRKFDV 277

Query: 540 EAWMPGLGRYGEISSASNCTDYQSRRLGIRYRP 638
           EAWMPGL R+GEISSASNCTDYQSRRLGIRYRP
Sbjct: 278 EAWMPGLERFGEISSASNCTDYQSRRLGIRYRP 310


>ref|XP_003602834.1| Seryl-tRNA synthetase [Medicago truncatula]
           gi|355491882|gb|AES73085.1| Seryl-tRNA synthetase
           [Medicago truncatula]
          Length = 546

 Score =  380 bits (975), Expect = e-103
 Identities = 183/213 (85%), Positives = 197/213 (92%), Gaps = 1/213 (0%)
 Frame = +3

Query: 3   VSGSKFYYLKNEAVMLEMALINWTLSKVMKKGFTPFTTPEIARSSIVKKCGFQPRATNTQ 182
           VSGSKFYYLKNEAV+LEMAL+NWTLS+VMK+GFTP TTPEI RSS+V+KCGFQPRA NTQ
Sbjct: 265 VSGSKFYYLKNEAVLLEMALLNWTLSEVMKRGFTPLTTPEIVRSSVVEKCGFQPRAKNTQ 324

Query: 183 VYSIEGSDQCLIGTAEIPLGGIHMDSILEDSSLPLKYVAFSHCFRTEAG-AGTTARGLYR 359
           VYSI+ SDQCLIGTAEIP+GG+HMDSIL +S LPLKYVAFSHCFRTEAG AGT  RGLYR
Sbjct: 325 VYSIDDSDQCLIGTAEIPVGGLHMDSILAESMLPLKYVAFSHCFRTEAGAAGTATRGLYR 384

Query: 360 VHQFSKVEMFILCRPEESDFYHEELIGIEEDLFSSLGFHFKTLDMALGDLGAPAYRKLDV 539
           VHQFSK+EMFI CRPEESD+YHEELI IEED+FSSLG HFKTLDMA  DLGAPAYRK DV
Sbjct: 385 VHQFSKIEMFIFCRPEESDYYHEELIKIEEDMFSSLGLHFKTLDMASEDLGAPAYRKFDV 444

Query: 540 EAWMPGLGRYGEISSASNCTDYQSRRLGIRYRP 638
           EAWMPGL R+GEISSASNCTDYQSRRLGIRYRP
Sbjct: 445 EAWMPGLERFGEISSASNCTDYQSRRLGIRYRP 477


>ref|XP_004160298.1| PREDICTED: serine--tRNA ligase-like [Cucumis sativus]
          Length = 563

 Score =  377 bits (967), Expect = e-102
 Identities = 183/214 (85%), Positives = 194/214 (90%), Gaps = 1/214 (0%)
 Frame = +3

Query: 3   VSGSKFYYLKNEAVMLEMALINWTLSKVMKKGFTPFTTPEIARSSIVKKCGFQPRATNTQ 182
           VSGSKFYYLKN AV LE+ LINWTLS+VMK+GFTP  TPEI RS++V+KCGFQPR  NTQ
Sbjct: 281 VSGSKFYYLKNAAVTLELGLINWTLSEVMKRGFTPLITPEIVRSTVVEKCGFQPRGENTQ 340

Query: 183 VYSIEGSDQCLIGTAEIPLGGIHMDSILEDSSLPLKYVAFSHCFRTEAG-AGTTARGLYR 359
           VYSIEGSDQCLIGTAEIP+GGIHMDSIL +SSLPLKYVA+SHCFRTEAG AG   RGLYR
Sbjct: 341 VYSIEGSDQCLIGTAEIPVGGIHMDSILSESSLPLKYVAYSHCFRTEAGAAGAATRGLYR 400

Query: 360 VHQFSKVEMFILCRPEESDFYHEELIGIEEDLFSSLGFHFKTLDMALGDLGAPAYRKLDV 539
           VHQFSKVEMFI CRPEES+ YHEELI IEEDLFSSLG HFKTLDMA  DLGAPAYRK DV
Sbjct: 401 VHQFSKVEMFIFCRPEESESYHEELIRIEEDLFSSLGLHFKTLDMASADLGAPAYRKFDV 460

Query: 540 EAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPK 641
           EAWMPGLGRYGEISSASNCTDYQSRRLGIRYRP+
Sbjct: 461 EAWMPGLGRYGEISSASNCTDYQSRRLGIRYRPQ 494


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