BLASTX nr result

ID: Panax21_contig00028172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028172
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21424.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002282548.1| PREDICTED: uncharacterized protein LOC100252...   102   3e-20
ref|XP_002523591.1| DNA binding protein, putative [Ricinus commu...    98   8e-19
ref|XP_002306470.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257...    89   3e-16

>emb|CBI21424.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  102 bits (254), Expect = 3e-20
 Identities = 64/142 (45%), Positives = 81/142 (57%), Gaps = 12/142 (8%)
 Frame = +2

Query: 2   MAQSSNAARWTXXXXXXXXXXXQDEKLDGTKELETMVSHVVSRRDMATQMSPE----GSP 169
           M +S +   W+           QDEKL G+K+ ETMVS VVSRRD+ATQMSP+     SP
Sbjct: 222 MERSISIPGWSDFLSESSSPNSQDEKLGGSKDAETMVSPVVSRRDIATQMSPDSNTHSSP 281

Query: 170 EGRLSGIASSPSVPSTEDPYSNYSAKVEVRDVQVDKGATMTRQSRKDGVRMTKKGSPDVN 349
           + R S    SP +P+ E     +S K EVRDVQVDKG TM R S+K G + T +  PDV 
Sbjct: 282 KDRFS-FPPSPLLPTLEQ--QTHSVKSEVRDVQVDKGVTMIRWSKKHGAKTTMRAPPDVE 338

Query: 350 DL--------ASPWVVAEAAKN 391
           +         AS W +AE +KN
Sbjct: 339 ETDKNAAEAQASSWDIAEPSKN 360


>ref|XP_002282548.1| PREDICTED: uncharacterized protein LOC100252502 [Vitis vinifera]
          Length = 402

 Score =  102 bits (254), Expect = 3e-20
 Identities = 64/142 (45%), Positives = 81/142 (57%), Gaps = 12/142 (8%)
 Frame = +2

Query: 2   MAQSSNAARWTXXXXXXXXXXXQDEKLDGTKELETMVSHVVSRRDMATQMSPE----GSP 169
           M +S +   W+           QDEKL G+K+ ETMVS VVSRRD+ATQMSP+     SP
Sbjct: 166 MERSISIPGWSDFLSESSSPNSQDEKLGGSKDAETMVSPVVSRRDIATQMSPDSNTHSSP 225

Query: 170 EGRLSGIASSPSVPSTEDPYSNYSAKVEVRDVQVDKGATMTRQSRKDGVRMTKKGSPDVN 349
           + R S    SP +P+ E     +S K EVRDVQVDKG TM R S+K G + T +  PDV 
Sbjct: 226 KDRFS-FPPSPLLPTLEQ--QTHSVKSEVRDVQVDKGVTMIRWSKKHGAKTTMRAPPDVE 282

Query: 350 DL--------ASPWVVAEAAKN 391
           +         AS W +AE +KN
Sbjct: 283 ETDKNAAEAQASSWDIAEPSKN 304


>ref|XP_002523591.1| DNA binding protein, putative [Ricinus communis]
           gi|223537153|gb|EEF38786.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 386

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 12/140 (8%)
 Frame = +2

Query: 2   MAQSSNAARWTXXXXXXXXXXXQDEKLDGTKELETMVSHVVSRRDMATQMSPEG----SP 169
           +A+S +   W+           QDEK+DG  + E  V+ V+SRRDMATQMSPEG    SP
Sbjct: 152 VARSVSGPGWSDLPSESSSPSSQDEKVDGINDAENTVTRVISRRDMATQMSPEGSTCSSP 211

Query: 170 EGRLSGIASSPSVPSTEDPYSNYSAKVEVRDVQVDKGATMTRQSRKDGVRMTKKGSPDVN 349
             R S   S PS+P  E   S++ AK+E+R+VQVDK AT+  ++ + G R +KKG PDV 
Sbjct: 212 RERSS---SPPSIPPVEQ--SDHPAKLEIREVQVDKRATLVSRTTRHGSRRSKKGLPDVQ 266

Query: 350 DL--------ASPWVVAEAA 385
           D+         S W V+EA+
Sbjct: 267 DINQNASDSRISLWNVSEAS 286


>ref|XP_002306470.1| predicted protein [Populus trichocarpa] gi|222855919|gb|EEE93466.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 11/115 (9%)
 Frame = +2

Query: 68  QDEKLDGTKELETMVSHVVSRRDMATQMSPEGSPEGRLSGIASSPSVPSTE---DPYSNY 238
           QDE+ +G  +    V  ++SRRDMATQMSPEGS      G +SSP  PST+   +P S++
Sbjct: 177 QDERPEGVDDGNNTVDRIISRRDMATQMSPEGSTHSSCRGRSSSP--PSTDPVLEPQSDH 234

Query: 239 SAKVEVRDVQVDKGATMTRQSRKDGVRMTKKGSPDVNDL--------ASPWVVAE 379
            AK+E+R+VQVDK AT+ R S++ G R  K+G PDV +         +S W ++E
Sbjct: 235 PAKLEIREVQVDKRATVIRWSKRPGSRRIKRGQPDVEEFNPNAADAHSSSWDISE 289


>ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257562 [Vitis vinifera]
           gi|302142306|emb|CBI19509.3| unnamed protein product
           [Vitis vinifera]
          Length = 570

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 56/120 (46%), Positives = 74/120 (61%), Gaps = 12/120 (10%)
 Frame = +2

Query: 68  QDEKLDGTKELETMVSHVVSRRDMATQMSPEGS----PEGRLSGIASSPSVPSTEDPYSN 235
           +DEK DG K+  T +S  VSRRD+ATQMSPEGS    PE + S   SSP+V    +  S 
Sbjct: 353 RDEKFDGVKDAATDISRTVSRRDIATQMSPEGSIFSSPERKPSFSPSSPTVLPIVELQSV 412

Query: 236 YSAKVEVRDVQVDKGATMTRQSRKDGVRMTKKGSPDVNDL--------ASPWVVAEAAKN 391
            S+K+E+RDVQVD+  TMTR S+K   R+  KGS +V+          +S W V+E AK+
Sbjct: 413 NSSKLEIRDVQVDERVTMTRWSKKHRGRIPGKGSENVDGWKKKAVEAHSSAWEVSETAKS 472


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