BLASTX nr result

ID: Panax21_contig00028133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028133
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]   158   1e-36
ref|XP_002534310.1| conserved hypothetical protein [Ricinus comm...   142   6e-32
ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-27
ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-26
ref|XP_002301045.1| predicted protein [Populus trichocarpa] gi|2...   110   4e-22

>emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]
          Length = 422

 Score =  158 bits (400), Expect = 1e-36
 Identities = 112/247 (45%), Positives = 137/247 (55%), Gaps = 12/247 (4%)
 Frame = +1

Query: 25  ANTPVDHFQTRAAHNPKKRSKASRRAPTTVLTTDTTNFRAMVQEFTGIXXXXXXXXXXXX 204
           A     + QT  A NPKKRS+ASRRAPTTVLTTDTTNFRAMVQEFTGI            
Sbjct: 112 ATASASNDQTNVARNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGI--PAQPFTSSPF 169

Query: 205 XXXXLDLFGASSSIRSNLLISQPPSYLLRPFAQKAQQPFVSSSP--------SSLLHDAN 360
               LDLFG +S++RS  L   PPSYLLRPFAQK Q P  +S P        SS + DA 
Sbjct: 170 PRSRLDLFGTASTMRSGHLDHAPPSYLLRPFAQKLQPPPFASPPPSSSSSFSSSSMVDA- 228

Query: 361 ILSLPHVFSNNITSTSTG----NLDLPSELGLLKRTISTSRSSDXXXXXXXXXXXXXXIH 528
           I S  ++ S + ++TS+     N  LPS+LGL+K+  +    +               I 
Sbjct: 229 IASTTNITSGSASNTSSNSTSINYQLPSDLGLVKQPQNLLNMN--------VQNPILSIQ 280

Query: 529 TFXXXXXXXXXXXXXXXXKTPQESQLEIPAHDSHSHLKMGLLDELGLSHGQVNNAHISGL 708
           +F                  PQ S LEIP+ D  SH+KMG L++ GLSHG V N H+SGL
Sbjct: 281 SFLQTPLKYPHPNSAIMGSKPQGS-LEIPSTD--SHIKMGGLEDFGLSHGHV-NTHLSGL 336

Query: 709 PSLVSSD 729
           P+LVSSD
Sbjct: 337 PNLVSSD 343


>ref|XP_002534310.1| conserved hypothetical protein [Ricinus communis]
           gi|223525518|gb|EEF28072.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 498

 Score =  142 bits (359), Expect = 6e-32
 Identities = 101/233 (43%), Positives = 127/233 (54%), Gaps = 6/233 (2%)
 Frame = +1

Query: 52  TRAAHNPKKRSKASRRAPTTVLTTDTTNFRAMVQEFTGIXXXXXXXXXXXXXXXXLDLFG 231
           T    NPKKRS+ASRRAPTTVLTTDTTNFRAMVQEFTGI                LDLFG
Sbjct: 175 TNIVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGI--PAPPFTSSPFPRSRLDLFG 232

Query: 232 --ASSSIRSNLLISQP--PSYLLRPFAQKAQQPFVSSSPSSLLHD--ANILSLPHVFSNN 393
             A+SS+RS +   +P  PSYLLRPFAQK Q PF+SSS SS + D  A+  +     ++N
Sbjct: 233 TAAASSLRSVVSHLEPSHPSYLLRPFAQKIQPPFLSSSSSSSMIDAIASSTTTSTNINSN 292

Query: 394 ITSTSTGNLDLPSELGLLKRTISTSRSSDXXXXXXXXXXXXXXIHTFXXXXXXXXXXXXX 573
            T+ +T N    S+L LLK                         H+              
Sbjct: 293 ATTNTTTNTTSNSDLSLLK-------YPQNLLNINMHNSPMLNFHSLFQPSPKYSLPNSS 345

Query: 574 XXXKTPQESQLEIPAHDSHSHLKMGLLDELGLSHGQVNNAHISGLPSLVSSDN 732
                PQE  L+ P++D   HLKMG+L+E GLSHG V + +++GL +LVSS +
Sbjct: 346 ILATKPQEGSLDTPSND--PHLKMGVLEEFGLSHGHV-STNLTGLHNLVSSSD 395


>ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|222853473|gb|EEE91020.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  128 bits (321), Expect = 1e-27
 Identities = 101/252 (40%), Positives = 131/252 (51%), Gaps = 25/252 (9%)
 Frame = +1

Query: 52  TRAAHNPKKRSKASRRAPTTVLTTDTTNFRAMVQEFTGIXXXXXXXXXXXXXXXXLDLFG 231
           T    NPKKRS+ASRRAPTTVLTTDTTNFRAMVQEFTGI                LDLFG
Sbjct: 168 TAGVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGI--PAPPFTSSPFPRSRLDLFG 225

Query: 232 -ASSSIRSNL---LISQPPSYLLRPFAQKAQ------QPFVSS-SPSSLLHDANILSLPH 378
            A+S++RS +   L   PP YLLRPFAQ+ Q       PF SS S +S    + + ++  
Sbjct: 226 TAASTLRSAVSHHLDPSPPPYLLRPFAQRFQPPPPPAPPFASSGSTASSFSTSMVDAIAS 285

Query: 379 VFSNNI-------TSTSTGNL-------DLPSELGLLKRTISTSRSSDXXXXXXXXXXXX 516
             + NI        ST+T N+        LPS+LGLLK+       +             
Sbjct: 286 TTTTNINNSGACTNSTTTSNISSTSINYQLPSDLGLLKQPHHLLNIN-----VQNPILNF 340

Query: 517 XXIHTFXXXXXXXXXXXXXXXXKTPQESQLEIPAHDSHSHLKMGLLDELGLSHGQVNNAH 696
             +                   K  Q S LEIP++D  SHLKMG+L+E G+SHG V + +
Sbjct: 341 HPLFQAPHKYPLPNSTNILGTTKAQQGSSLEIPSND--SHLKMGVLEEFGMSHGHV-STN 397

Query: 697 ISGLPSLVSSDN 732
           ++GL ++VSS +
Sbjct: 398 LTGLQNIVSSSS 409


>ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|222856542|gb|EEE94089.1|
           predicted protein [Populus trichocarpa]
          Length = 510

 Score =  124 bits (312), Expect = 2e-26
 Identities = 103/266 (38%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
 Frame = +1

Query: 4   GVSALSLANTPVDHFQTRAAHNPKKRSKASRRAPTTVLTTDTTNFRAMVQEFTGIXXXXX 183
           G  ++S  N  V +  T    NPKKRS+ASRRAPTTVL+TDTTNFRAMVQEFTGI     
Sbjct: 162 GSGSVSGTNDQVSN--TAGIRNPKKRSRASRRAPTTVLSTDTTNFRAMVQEFTGI--PAP 217

Query: 184 XXXXXXXXXXXLDLFG-ASSSIRSNL---LISQPPSYLLRPFAQKAQ----QPFVSSSPS 339
                      LDLFG A+S++RS +   L   PP YLL PFA+K Q     PFVSS  +
Sbjct: 218 PFTSSPFPRSRLDLFGTAASTLRSAVSQHLDPSPPPYLLGPFAKKFQPPPPPPFVSSGSA 277

Query: 340 SLLHDANIL-SLPHVFSNNITSTSTG------------NLDLPSELGLLKRTISTSRSSD 480
           +    A+++ ++    + NI  T T             N  LPS+LGLLK+  +    + 
Sbjct: 278 ASSFSASMVDAIASTTATNINGTCTNTTISNNIPLTSINYQLPSDLGLLKQPHNLLNLN- 336

Query: 481 XXXXXXXXXXXXXXIHTFXXXXXXXXXXXXXXXXKT--PQESQLEIPAHDSHSHLKMGLL 654
                          H                   T  PQ+  LEIP   + SHLKM +L
Sbjct: 337 -------VQNPILNFHPLLQAPPKYPLPDSPNILGTTKPQQGSLEIPL--NVSHLKMVVL 387

Query: 655 DELGLSHGQVNNAHISGLPSLVSSDN 732
           +E GL+HG V N ++SGL ++VSS +
Sbjct: 388 EEFGLNHGHV-NTNLSGLQNIVSSSS 412


>ref|XP_002301045.1| predicted protein [Populus trichocarpa] gi|222842771|gb|EEE80318.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score =  110 bits (274), Expect = 4e-22
 Identities = 95/249 (38%), Positives = 120/249 (48%), Gaps = 20/249 (8%)
 Frame = +1

Query: 43  HFQTRA-AHNPKKRSKASRRAPTTVLTTDTTNFRAMVQEFTGIXXXXXXXXXXXXXXXXL 219
           H QT   A NPKKR++ASRRAPTTVLTTDT+NFR MVQEFTGI                L
Sbjct: 131 HDQTHGIARNPKKRTRASRRAPTTVLTTDTSNFRQMVQEFTGI---PAPPFSGSPFTRRL 187

Query: 220 DLFGASSSIRSNLLISQPPSYLLRPFAQKA---QQPFVSSSPSSLL-----HDANILSLP 375
           DLFG  S +RS  L    P Y LRP AQK    Q PF+SSS  SLL     H  NI S  
Sbjct: 188 DLFGPGSGLRSGHL---EPLYPLRPTAQKVHHQQTPFLSSSFPSLLNNNIVHTTNIASTS 244

Query: 376 HVFSNNIT---------STSTGNLDLPSELGLLKRTISTSRSSDXXXXXXXXXXXXXXIH 528
              +NN T         + S+ N  LP ++GL K+T +     +              IH
Sbjct: 245 TTANNNNTISTAATSTFNPSSLNYQLPDDIGLHKQTRNLLNMQN----------QMLSIH 294

Query: 529 TFXXXXXXXXXXXXXXXXKTPQESQLEIPAHDSHSHLKMGL--LDELGLSHGQVNNAHIS 702
                               P +    +P   ++S   + L  L+ELG+ HG V NA++S
Sbjct: 295 PL-----------LHPPPPPPPQQLPNVPGLGANSRASLPLPSLEELGMGHGYV-NANLS 342

Query: 703 GLPSLVSSD 729
           GL S V+++
Sbjct: 343 GLTSHVTTE 351


Top