BLASTX nr result

ID: Panax21_contig00028107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028107
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27840.3| unnamed protein product [Vitis vinifera]              155   3e-36
ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like ...   155   3e-36
emb|CAN62547.1| hypothetical protein VITISV_000759 [Vitis vinifera]   155   3e-36
ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like ...   152   4e-35
ref|XP_003551146.1| PREDICTED: protein Brevis radix-like 4-like ...   151   5e-35

>emb|CBI27840.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  155 bits (392), Expect = 3e-36
 Identities = 81/124 (65%), Positives = 93/124 (75%)
 Frame = -2

Query: 373 RSCSPCTGPVTHHRQKSFAETESASGSERFRWXXXXXXXXXXXXXXXGRVWGKEMEARLK 194
           R+C+PC+  V  H+ +S+AE++SAS SERFRW                  WGKEMEARLK
Sbjct: 54  RNCNPCSASV-QHQSRSYAESDSASASERFRWSYRRTGSSSSTTPR----WGKEMEARLK 108

Query: 193 GISSGDGTPASVLLSASGRRAEPVVLVEENEPREWVAQVEPGILITFVSLPRGGNDLKRI 14
           G+SSG+GTPAS    ASGRR E VV VEENEP+EWVAQVEPG+LITFVSLPRGGNDLKRI
Sbjct: 109 GLSSGEGTPAS----ASGRRVESVVFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRI 164

Query: 13  RFSR 2
           RFSR
Sbjct: 165 RFSR 168


>ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like [Vitis vinifera]
          Length = 371

 Score =  155 bits (392), Expect = 3e-36
 Identities = 81/124 (65%), Positives = 93/124 (75%)
 Frame = -2

Query: 373 RSCSPCTGPVTHHRQKSFAETESASGSERFRWXXXXXXXXXXXXXXXGRVWGKEMEARLK 194
           R+C+PC+  V  H+ +S+AE++SAS SERFRW                  WGKEMEARLK
Sbjct: 54  RNCNPCSASV-QHQSRSYAESDSASASERFRWSYRRTGSSSSTTPR----WGKEMEARLK 108

Query: 193 GISSGDGTPASVLLSASGRRAEPVVLVEENEPREWVAQVEPGILITFVSLPRGGNDLKRI 14
           G+SSG+GTPAS    ASGRR E VV VEENEP+EWVAQVEPG+LITFVSLPRGGNDLKRI
Sbjct: 109 GLSSGEGTPAS----ASGRRVESVVFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRI 164

Query: 13  RFSR 2
           RFSR
Sbjct: 165 RFSR 168


>emb|CAN62547.1| hypothetical protein VITISV_000759 [Vitis vinifera]
          Length = 560

 Score =  155 bits (392), Expect = 3e-36
 Identities = 81/124 (65%), Positives = 93/124 (75%)
 Frame = -2

Query: 373 RSCSPCTGPVTHHRQKSFAETESASGSERFRWXXXXXXXXXXXXXXXGRVWGKEMEARLK 194
           R+C+PC+  V  H+ +S+AE++SAS SERFRW                  WGKEMEARLK
Sbjct: 173 RNCNPCSASV-QHQSRSYAESDSASASERFRWSYRRTGSSSSTTPR----WGKEMEARLK 227

Query: 193 GISSGDGTPASVLLSASGRRAEPVVLVEENEPREWVAQVEPGILITFVSLPRGGNDLKRI 14
           G+SSG+GTPAS    ASGRR E VV VEENEP+EWVAQVEPG+LITFVSLPRGGNDLKRI
Sbjct: 228 GLSSGEGTPAS----ASGRRVESVVFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRI 283

Query: 13  RFSR 2
           RFSR
Sbjct: 284 RFSR 287


>ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like [Glycine max]
          Length = 366

 Score =  152 bits (383), Expect = 4e-35
 Identities = 84/125 (67%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 RSCSPCTGPVTHHRQKSFAETESASGSERFRWXXXXXXXXXXXXXXXGRVWGKEMEARLK 194
           + C+PCTGP T  R +S   TES + S+RFRW                R WGKEMEARLK
Sbjct: 47  KHCAPCTGPATQGRFRSNT-TESDADSDRFRWSYRRTGSSSSTTT---RTWGKEMEARLK 102

Query: 193 GISSGDGTPASVLLSASGRRAEPVVL-VEENEPREWVAQVEPGILITFVSLPRGGNDLKR 17
           GISSG+GTP S    ASGRRAEPVVL VEENEP+EWVAQVEPG+LITFVSLPRGGNDLKR
Sbjct: 103 GISSGEGTPNS----ASGRRAEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKR 158

Query: 16  IRFSR 2
           IRFSR
Sbjct: 159 IRFSR 163


>ref|XP_003551146.1| PREDICTED: protein Brevis radix-like 4-like [Glycine max]
          Length = 366

 Score =  151 bits (382), Expect = 5e-35
 Identities = 84/125 (67%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = -2

Query: 373 RSCSPCTGPVTHHRQKSFAETESASGSERFRWXXXXXXXXXXXXXXXGRVWGKEMEARLK 194
           + C+PCTGP T  R +S A TE  + S+RFRW                R WGKEMEARLK
Sbjct: 47  KHCAPCTGPATQGRVRSNA-TELDADSDRFRWSYRRTGSSSSTTT---RTWGKEMEARLK 102

Query: 193 GISSGDGTPASVLLSASGRRAEPVVL-VEENEPREWVAQVEPGILITFVSLPRGGNDLKR 17
           GISSG+GTP S    ASGRRAEPVVL VEENEP+EWVAQVEPG+LITFVSLPRGGNDLKR
Sbjct: 103 GISSGEGTPNS----ASGRRAEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKR 158

Query: 16  IRFSR 2
           IRFSR
Sbjct: 159 IRFSR 163


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