BLASTX nr result

ID: Panax21_contig00028097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028097
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...   377   e-102
ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...   347   1e-93
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   337   2e-90
dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]                         335   5e-90
ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|2...   325   7e-87

>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Vitis vinifera]
          Length = 405

 Score =  377 bits (967), Expect = e-102
 Identities = 176/235 (74%), Positives = 202/235 (85%)
 Frame = -2

Query: 707 INTFYDMHLYGCKRTVKSFNAALMVLTQTRDLGAICTFLSDGPLRFGVNLDAYSFNIIIK 528
           ++TFYDMHL+GC+RTVKSFNAAL VLTQ+ DL AI  FL D P +FG+ LD +S NI+IK
Sbjct: 130 VDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDVPFKFGIELDVFSVNIVIK 189

Query: 527 AFCEMALYDKACLIMVEMEKMGIKPDVVTYTALISAFYKVNGWEIGNGLWNLMVSRGCLP 348
           A C+M + +KA ++M+EMEK G+ PDVVTYT LISAFYK N WE+GNGLWNLMV +GCLP
Sbjct: 190 ALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEVGNGLWNLMVMKGCLP 249

Query: 347 NLATFNVRIQCLVNGGRAWQANSLMGMMQYLGIRPDEVTYNLVIKGFCVAGYIEMAKRVY 168
           NLATFNVRIQ LVN  RAWQANSLMGMM+YLGI PDEVTYNLVIKGFC AGY+EMAK+VY
Sbjct: 250 NLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIKGFCQAGYLEMAKKVY 309

Query: 167 SALHDEGYKPNAKIYQTMIHYLCKAGDFDLAYSMCKDCMNKNLFPNVDTIYTLLE 3
           SALH +GYKPN KIYQTMIHYLCK G+FD+AY+MCKDCMN+N   NVDTIY LLE
Sbjct: 310 SALHGKGYKPNVKIYQTMIHYLCKGGEFDMAYTMCKDCMNRNWSLNVDTIYKLLE 364


>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  347 bits (890), Expect = 1e-93
 Identities = 166/235 (70%), Positives = 200/235 (85%)
 Frame = -2

Query: 707 INTFYDMHLYGCKRTVKSFNAALMVLTQTRDLGAICTFLSDGPLRFGVNLDAYSFNIIIK 528
           ++TF DMH+YGCKRTVKSFNAAL VLT+T DL AI  FLS+ P +F + LD +S NIIIK
Sbjct: 126 VDTFNDMHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEVPEKFDIILDIFSVNIIIK 185

Query: 527 AFCEMALYDKACLIMVEMEKMGIKPDVVTYTALISAFYKVNGWEIGNGLWNLMVSRGCLP 348
           AFC+M++ DKA L+M++ME++GI+PDVVTYT LISAFYK + WEI NGLWNLMV +GCLP
Sbjct: 186 AFCKMSILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDRWEISNGLWNLMVLKGCLP 245

Query: 347 NLATFNVRIQCLVNGGRAWQANSLMGMMQYLGIRPDEVTYNLVIKGFCVAGYIEMAKRVY 168
           NL+TFNVRIQ LVN  ++WQAN +M +M+ +GI PDEVTYNLVIKGF  AGY+EMA+RVY
Sbjct: 246 NLSTFNVRIQHLVNIRQSWQANEVMLLMERIGISPDEVTYNLVIKGFGQAGYLEMARRVY 305

Query: 167 SALHDEGYKPNAKIYQTMIHYLCKAGDFDLAYSMCKDCMNKNLFPNVDTIYTLLE 3
           SALH +GYKPN KIYQTMIH LCK G+FDLAY+MCKDCM K+ F NVDTI+TLL+
Sbjct: 306 SALHGKGYKPNVKIYQTMIHCLCKGGEFDLAYTMCKDCMKKSWFLNVDTIHTLLD 360


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
           gi|449484169|ref|XP_004156805.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  337 bits (863), Expect = 2e-90
 Identities = 161/235 (68%), Positives = 191/235 (81%)
 Frame = -2

Query: 707 INTFYDMHLYGCKRTVKSFNAALMVLTQTRDLGAICTFLSDGPLRFGVNLDAYSFNIIIK 528
           ++TFYDMHLYGC RTVKSFNA L VL ++RDLGA+  FLS+ P +F + LD  S NI++K
Sbjct: 125 LDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVK 184

Query: 527 AFCEMALYDKACLIMVEMEKMGIKPDVVTYTALISAFYKVNGWEIGNGLWNLMVSRGCLP 348
           AFC+    ++A L+M+EMEK+GIKPDVVTYT LISA YK    EI NGLWNLMV RGCLP
Sbjct: 185 AFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLP 244

Query: 347 NLATFNVRIQCLVNGGRAWQANSLMGMMQYLGIRPDEVTYNLVIKGFCVAGYIEMAKRVY 168
           NL TFNVRIQ L+   RAW AN LM MM+ +GI PDEVTYNLVIKGFC AG ++MAKRVY
Sbjct: 245 NLTTFNVRIQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVY 304

Query: 167 SALHDEGYKPNAKIYQTMIHYLCKAGDFDLAYSMCKDCMNKNLFPNVDTIYTLLE 3
           SALH  GYKPN KIYQTMIHYLCK+ DF+LA+++CKD MNKN FPN+DTI++LL+
Sbjct: 305 SALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLK 359


>dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
          Length = 399

 Score =  335 bits (859), Expect = 5e-90
 Identities = 160/234 (68%), Positives = 189/234 (80%)
 Frame = -2

Query: 707 INTFYDMHLYGCKRTVKSFNAALMVLTQTRDLGAICTFLSDGPLRFGVNLDAYSFNIIIK 528
           +NTFYDMHLYGCKRTVKSFNAAL VLT TR++ AI  FL + P +F + +D +S NIIIK
Sbjct: 125 LNTFYDMHLYGCKRTVKSFNAALKVLTGTRNMVAIQDFLCEAPEKFDITMDIFSINIIIK 184

Query: 527 AFCEMALYDKACLIMVEMEKMGIKPDVVTYTALISAFYKVNGWEIGNGLWNLMVSRGCLP 348
           A CEM   DKA L+MV+ +K GI+ DV+TYT LISA Y+   W IGNGLWNLMV +GC P
Sbjct: 185 ALCEMGYLDKAYLVMVQFQKSGIEADVITYTTLISASYRNKLWMIGNGLWNLMVLKGCKP 244

Query: 347 NLATFNVRIQCLVNGGRAWQANSLMGMMQYLGIRPDEVTYNLVIKGFCVAGYIEMAKRVY 168
           NLATFNVRIQ LVN  ++W+AN +M +MQ +GI PD+VTYNLVIKGFC+AGY+EMAKRVY
Sbjct: 245 NLATFNVRIQYLVNSRQSWEANDVMRLMQRIGIAPDQVTYNLVIKGFCLAGYLEMAKRVY 304

Query: 167 SALHDEGYKPNAKIYQTMIHYLCKAGDFDLAYSMCKDCMNKNLFPNVDTIYTLL 6
           SAL  E YKPN KIYQTMIHYLCK G+FDLAY+MCKDCM K  + +VDTI+ LL
Sbjct: 305 SALQGEVYKPNFKIYQTMIHYLCKGGEFDLAYTMCKDCMGKGWYLHVDTIHALL 358


>ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|222840687|gb|EEE78234.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  325 bits (832), Expect = 7e-87
 Identities = 158/235 (67%), Positives = 187/235 (79%)
 Frame = -2

Query: 707 INTFYDMHLYGCKRTVKSFNAALMVLTQTRDLGAICTFLSDGPLRFGVNLDAYSFNIIIK 528
           I+TFY+MHL+GCKRTVKS NAAL VLT TRDL AI  F+++ P +F + LD +S NII+K
Sbjct: 127 IDTFYNMHLHGCKRTVKSVNAALKVLTGTRDLAAIEAFVNEAPKKFDIELDIFSVNIIVK 186

Query: 527 AFCEMALYDKACLIMVEMEKMGIKPDVVTYTALISAFYKVNGWEIGNGLWNLMVSRGCLP 348
           A CE    DKA L+MVEMEK G++PDV+TYT L+SAFYK N  EIGNGLWNLMV +GCLP
Sbjct: 187 ALCETGNLDKAYLLMVEMEKSGVRPDVITYTTLMSAFYKNNRSEIGNGLWNLMVLKGCLP 246

Query: 347 NLATFNVRIQCLVNGGRAWQANSLMGMMQYLGIRPDEVTYNLVIKGFCVAGYIEMAKRVY 168
           NLATFNVRIQ LVN  RAW AN +M +M  +GI PDEVTYNLVIKGF   G +EMAK VY
Sbjct: 247 NLATFNVRIQYLVNIRRAWHANDVMRLMLKIGIVPDEVTYNLVIKGFFQTGKLEMAKMVY 306

Query: 167 SALHDEGYKPNAKIYQTMIHYLCKAGDFDLAYSMCKDCMNKNLFPNVDTIYTLLE 3
            +L  +G+K N K+YQTM+HYLCK G+FDLAY+MC+DCM  N F NVDTI+TLLE
Sbjct: 307 FSLRGKGHKFNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRNNWFLNVDTIHTLLE 361


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