BLASTX nr result

ID: Panax21_contig00028003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00028003
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326142.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
emb|CBI27763.3| unnamed protein product [Vitis vinifera]               93   4e-17
ref|XP_002275889.1| PREDICTED: uncharacterized protein LOC100256...    93   4e-17
ref|XP_002516223.1| conserved hypothetical protein [Ricinus comm...    86   5e-15
ref|NP_564076.1| uncharacterized protein [Arabidopsis thaliana] ...    85   9e-15

>ref|XP_002326142.1| predicted protein [Populus trichocarpa] gi|222833335|gb|EEE71812.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = -2

Query: 502 TRPPRHFVSLWTCSKLCAVCFVAGIVVGYTLKRRVRRWASKLLRRLKDD 356
           TRPPR  VSLWTCSK+CA+ FVAGIVVGYTLK+RVRRWA+KLLRRLKDD
Sbjct: 46  TRPPRQMVSLWTCSKMCAIFFVAGIVVGYTLKKRVRRWAAKLLRRLKDD 94


>emb|CBI27763.3| unnamed protein product [Vitis vinifera]
          Length = 90

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = -2

Query: 502 TRPPRHFVSLWTCSKLCAVCFVAGIVVGYTLKRRVRRWASKLLRRLKDD 356
           TR PR  VSLWTCSKLCAV FVAG+VVGYTLKRRVRRWASKLLRRLKDD
Sbjct: 42  TRAPRQAVSLWTCSKLCAVFFVAGVVVGYTLKRRVRRWASKLLRRLKDD 90


>ref|XP_002275889.1| PREDICTED: uncharacterized protein LOC100256162 isoform 1 [Vitis
           vinifera] gi|225444631|ref|XP_002275911.1| PREDICTED:
           uncharacterized protein LOC100256162 isoform 2 [Vitis
           vinifera]
          Length = 96

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = -2

Query: 502 TRPPRHFVSLWTCSKLCAVCFVAGIVVGYTLKRRVRRWASKLLRRLKDD 356
           TR PR  VSLWTCSKLCAV FVAG+VVGYTLKRRVRRWASKLLRRLKDD
Sbjct: 48  TRAPRQAVSLWTCSKLCAVFFVAGVVVGYTLKRRVRRWASKLLRRLKDD 96


>ref|XP_002516223.1| conserved hypothetical protein [Ricinus communis]
           gi|223544709|gb|EEF46225.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 38/49 (77%), Positives = 43/49 (87%)
 Frame = -2

Query: 502 TRPPRHFVSLWTCSKLCAVCFVAGIVVGYTLKRRVRRWASKLLRRLKDD 356
           TRP R  VSLWTCSKLC V F+AG++VGYTLKRRVRRWASKLL+ L+DD
Sbjct: 52  TRPSRQLVSLWTCSKLCTVFFIAGVLVGYTLKRRVRRWASKLLKTLRDD 100


>ref|NP_564076.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8954061|gb|AAF82234.1|AC069143_10 T29M8.11
           [Arabidopsis thaliana] gi|17380844|gb|AAL36234.1|
           unknown protein [Arabidopsis thaliana]
           gi|21436407|gb|AAM51404.1| unknown protein [Arabidopsis
           thaliana] gi|332191701|gb|AEE29822.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 104

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 41/49 (83%), Positives = 44/49 (89%)
 Frame = -2

Query: 502 TRPPRHFVSLWTCSKLCAVCFVAGIVVGYTLKRRVRRWASKLLRRLKDD 356
           TRPP   VS+WTCSKLCAV FVAG+ VGYTLKRRVRRWASKLLRR+KDD
Sbjct: 57  TRPPSG-VSVWTCSKLCAVFFVAGVFVGYTLKRRVRRWASKLLRRIKDD 104


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