BLASTX nr result

ID: Panax21_contig00027995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027995
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300566.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002264140.1| PREDICTED: probable 3-hydroxyisobutyrate deh...    96   3e-18
ref|XP_002523182.1| 3-hydroxyisobutyrate dehydrogenase, putative...    90   2e-16
gb|AAM63893.1| 3-hydroxyisobutyrate dehydrogenase-like protein [...    85   5e-15
pir||T10635 3-hydroxyisobutyrate dehydrogenase homolog T13K14.90...    85   5e-15

>ref|XP_002300566.1| predicted protein [Populus trichocarpa] gi|222847824|gb|EEE85371.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/57 (78%), Positives = 52/57 (91%)
 Frame = -1

Query: 364 LMAKDLNLAAASAKEVGLKCPLTFQAEDIFTELCDSGHASKDFSCVFRHYYSGKDKL 194
           LMAKDLNLAA SAKEVGL+CPLT+QA++I+TELC  GH SKDFSC FRHYYSG+D+L
Sbjct: 291 LMAKDLNLAATSAKEVGLQCPLTYQAQEIYTELCKDGHESKDFSCAFRHYYSGQDEL 347


>ref|XP_002264140.1| PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase,
           mitochondrial [Vitis vinifera]
           gi|297740847|emb|CBI31029.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/56 (78%), Positives = 48/56 (85%)
 Frame = -1

Query: 364 LMAKDLNLAAASAKEVGLKCPLTFQAEDIFTELCDSGHASKDFSCVFRHYYSGKDK 197
           LMAKDLNLAA SAKE GL CPLT QA++IF ELC  GH +KDFSCVFRHYYSGKD+
Sbjct: 289 LMAKDLNLAAESAKETGLTCPLTSQAKEIFVELCKEGHEAKDFSCVFRHYYSGKDE 344


>ref|XP_002523182.1| 3-hydroxyisobutyrate dehydrogenase, putative [Ricinus communis]
           gi|223537589|gb|EEF39213.1| 3-hydroxyisobutyrate
           dehydrogenase, putative [Ricinus communis]
          Length = 388

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = -1

Query: 364 LMAKDLNLAAASAKEVGLKCPLTFQAEDIFTELCDSGHASKDFSCVFRHYYSGKDKL 194
           LM KDLNLAAASAK V   CPLT QA +I+TE+C++GH ++DFSCVFRHYY GKDKL
Sbjct: 332 LMTKDLNLAAASAKAVDFTCPLTQQALEIYTEMCENGHETEDFSCVFRHYYFGKDKL 388


>gb|AAM63893.1| 3-hydroxyisobutyrate dehydrogenase-like protein [Arabidopsis
           thaliana]
          Length = 347

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/57 (64%), Positives = 50/57 (87%)
 Frame = -1

Query: 364 LMAKDLNLAAASAKEVGLKCPLTFQAEDIFTELCDSGHASKDFSCVFRHYYSGKDKL 194
           LMAKDLNLAAASA+EVG K PL  +A++I+ ++C+ GH +KDFSCVFRH+Y+GKD++
Sbjct: 291 LMAKDLNLAAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCVFRHFYNGKDEV 347


>pir||T10635 3-hydroxyisobutyrate dehydrogenase homolog T13K14.90 - Arabidopsis
           thaliana gi|5262783|emb|CAB45888.1| 3-hydroxyisobutyrate
           dehydrogenase-like protein [Arabidopsis thaliana]
           gi|7268890|emb|CAB79093.1| 3-hydroxyisobutyrate
           dehydrogenase-like protein [Arabidopsis thaliana]
          Length = 371

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/57 (64%), Positives = 50/57 (87%)
 Frame = -1

Query: 364 LMAKDLNLAAASAKEVGLKCPLTFQAEDIFTELCDSGHASKDFSCVFRHYYSGKDKL 194
           LMAKDLNLAAASA+EVG K PL  +A++I+ ++C+ GH +KDFSCVFRH+Y+GKD++
Sbjct: 315 LMAKDLNLAAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCVFRHFYNGKDEV 371


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