BLASTX nr result

ID: Panax21_contig00027992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027992
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2VEX9.1|CRTSO_DAUCA RecName: Full=Prolycopene isomerase, chl...   135   4e-30
dbj|BAL27717.1| carotenoid isomerase [Calendula officinalis]          130   1e-28
dbj|BAL27715.1| carotenoid isomerase [Calendula officinalis]          130   1e-28
dbj|BAL27714.1| carotenoid isomerase [Calendula officinalis]          130   1e-28
ref|XP_002308337.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28

>sp|Q2VEX9.1|CRTSO_DAUCA RecName: Full=Prolycopene isomerase, chloroplastic; Short=CrtISO;
           AltName: Full=Carotenoid isomerase; Flags: Precursor
           gi|79154796|gb|ABB52069.1| putative carotenoid isomerase
           [Daucus carota subsp. sativus]
          Length = 615

 Score =  135 bits (339), Expect = 4e-30
 Identities = 65/78 (83%), Positives = 70/78 (89%)
 Frame = +3

Query: 39  KIVGVRLSNGREFFAKNIISNATRLDTFGKLLKQEELPTEEERFQKLYVKAPSFLSIHLG 218
           K VGVRL+NG E FAKNIISNATR DTFGKLLKQ+ELP EEE FQKLY+KAPSFLSIHLG
Sbjct: 358 KAVGVRLANGNEIFAKNIISNATRWDTFGKLLKQDELPKEEENFQKLYIKAPSFLSIHLG 417

Query: 219 VKADVLPPDTDFQHFILE 272
           VK+DVLPPDTD  HF+LE
Sbjct: 418 VKSDVLPPDTDCHHFVLE 435


>dbj|BAL27717.1| carotenoid isomerase [Calendula officinalis]
          Length = 645

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/78 (78%), Positives = 71/78 (91%)
 Frame = +3

Query: 39  KIVGVRLSNGREFFAKNIISNATRLDTFGKLLKQEELPTEEERFQKLYVKAPSFLSIHLG 218
           K VGVRLS+GRE FAK IISNATR DTFGKLLK++++P EEE+FQK+Y+KAPSFLSIH+G
Sbjct: 388 KAVGVRLSDGRELFAKTIISNATRWDTFGKLLKRQDIPKEEEKFQKVYIKAPSFLSIHMG 447

Query: 219 VKADVLPPDTDFQHFILE 272
           VKADVLPPDTD  HF+LE
Sbjct: 448 VKADVLPPDTDCHHFVLE 465


>dbj|BAL27715.1| carotenoid isomerase [Calendula officinalis]
          Length = 648

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/78 (79%), Positives = 71/78 (91%)
 Frame = +3

Query: 39  KIVGVRLSNGREFFAKNIISNATRLDTFGKLLKQEELPTEEERFQKLYVKAPSFLSIHLG 218
           K VGVRLS+GREF+AK IISNATR DTFGKLLK+++LP EEE FQK+YVKAPSFLSIH+G
Sbjct: 391 KAVGVRLSDGREFYAKTIISNATRWDTFGKLLKKQDLPKEEENFQKVYVKAPSFLSIHMG 450

Query: 219 VKADVLPPDTDFQHFILE 272
           VKA+VLPPDTD  HF+LE
Sbjct: 451 VKAEVLPPDTDCHHFVLE 468


>dbj|BAL27714.1| carotenoid isomerase [Calendula officinalis]
          Length = 648

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/78 (79%), Positives = 71/78 (91%)
 Frame = +3

Query: 39  KIVGVRLSNGREFFAKNIISNATRLDTFGKLLKQEELPTEEERFQKLYVKAPSFLSIHLG 218
           K VGVRLS+GREF+AK IISNATR DTFGKLLK+++LP EEE FQK+YVKAPSFLSIH+G
Sbjct: 391 KAVGVRLSDGREFYAKTIISNATRWDTFGKLLKKQDLPKEEENFQKVYVKAPSFLSIHMG 450

Query: 219 VKADVLPPDTDFQHFILE 272
           VKA+VLPPDTD  HF+LE
Sbjct: 451 VKAEVLPPDTDCHHFVLE 468


>ref|XP_002308337.1| predicted protein [Populus trichocarpa] gi|222854313|gb|EEE91860.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/78 (82%), Positives = 69/78 (88%)
 Frame = +3

Query: 39  KIVGVRLSNGREFFAKNIISNATRLDTFGKLLKQEELPTEEERFQKLYVKAPSFLSIHLG 218
           K VGVRLS+GREFFAK IISNATR DTFGKLLK E LP EEE FQK+YVKAPSFLSIH+G
Sbjct: 349 KAVGVRLSDGREFFAKTIISNATRWDTFGKLLKGETLPKEEENFQKVYVKAPSFLSIHMG 408

Query: 219 VKADVLPPDTDFQHFILE 272
           VKA+VLPPDTD  HF+LE
Sbjct: 409 VKAEVLPPDTDCHHFVLE 426


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