BLASTX nr result

ID: Panax21_contig00027983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027983
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171117.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   143   2e-32
ref|XP_004142810.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   143   2e-32
ref|XP_002527823.1| ATP-dependent clp protease ATP-binding subun...   134   6e-30
ref|XP_002268594.2| PREDICTED: ATP-dependent Clp protease ATP-bi...   132   3e-29
ref|NP_568714.4| ATP-dependent Clp protease [Arabidopsis thalian...   130   8e-29

>ref|XP_004171117.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit
           ClpX-like, partial [Cucumis sativus]
          Length = 321

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/100 (67%), Positives = 80/100 (80%)
 Frame = -3

Query: 460 QVRHKWEGSSDDYDQIRAELNCPRCSKLMYVLFSNRPLSITGGETGIYQALNVCPSCRTA 281
           Q RH W+G+SD YD IRA++NCPRCSK M V+FSNRPLSITG ETG+YQALN+CP+C+TA
Sbjct: 56  QKRHSWKGASD-YDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTA 114

Query: 280 FYFRPLKLVPLQGSFIEIGRVQGYDSVSNDDDENGKVRVK 161
           FYFRPLKLVPL G+FIEIGRV+G   + +D D       K
Sbjct: 115 FYFRPLKLVPLHGTFIEIGRVKGARDLDHDADNESNQPTK 154


>ref|XP_004142810.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
           [Cucumis sativus]
          Length = 619

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/100 (67%), Positives = 80/100 (80%)
 Frame = -3

Query: 460 QVRHKWEGSSDDYDQIRAELNCPRCSKLMYVLFSNRPLSITGGETGIYQALNVCPSCRTA 281
           Q RH W+G+SD YD IRA++NCPRCSK M V+FSNRPLSITG ETG+YQALN+CP+C+TA
Sbjct: 56  QKRHSWKGASD-YDYIRADVNCPRCSKQMPVIFSNRPLSITGRETGVYQALNLCPNCKTA 114

Query: 280 FYFRPLKLVPLQGSFIEIGRVQGYDSVSNDDDENGKVRVK 161
           FYFRPLKLVPL G+FIEIGRV+G   + +D D       K
Sbjct: 115 FYFRPLKLVPLHGTFIEIGRVKGARDLDHDADNESNQPTK 154


>ref|XP_002527823.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
           [Ricinus communis] gi|223532747|gb|EEF34526.1|
           ATP-dependent clp protease ATP-binding subunit clpx,
           putative [Ricinus communis]
          Length = 603

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/120 (59%), Positives = 87/120 (72%), Gaps = 5/120 (4%)
 Frame = -3

Query: 481 LGLGLGFQVRHKWEGSSDDYDQIRAELNCPRCSKLMYVLFSNRPLSITGGETGIYQALNV 302
           L LGLG  +R   + S+ DYD IRA +NCPRCS  M VLFSNRPLSITG ETGI+QA+N 
Sbjct: 44  LRLGLG-SIRKVSDKSTTDYDHIRANVNCPRCSSQMPVLFSNRPLSITGRETGIFQAVNF 102

Query: 301 CPSCRTAFYFRPLKLVPLQGSFIEIGRVQGYDSVSNDDD-----ENGKVRVKIWEKLRSY 137
           CP+C+TAFYFRP KL PLQGSFIE+GRV+G+D+ S   +     + G V VK   K+ S+
Sbjct: 103 CPNCKTAFYFRPFKLEPLQGSFIELGRVKGFDNGSCSSNNVNCKDTGGVIVKDCGKIGSF 162


>ref|XP_002268594.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
           [Vitis vinifera]
          Length = 637

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/102 (64%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
 Frame = -3

Query: 436 SSDDYDQIRAELNCPRCSKLMYVLFSNRPLSITGGET-GIYQALNVCPSCRTAFYFRPLK 260
           S D YD IRA++NCPRCS  M +LFSNRPLSIT  E  G+YQALN+CP+CRTAFYFRP K
Sbjct: 76  SGDTYDHIRADVNCPRCSSQMSILFSNRPLSITAAEPPGVYQALNLCPNCRTAFYFRPFK 135

Query: 259 LVPLQGSFIEIGRVQGYDSVSNDDDENGKVRVKIWEKLRSYG 134
           L PLQGSFIEIGR +  D         G+  V IWEKLR YG
Sbjct: 136 LAPLQGSFIEIGRFKDKDGGGGGGGGGGR-GVPIWEKLRLYG 176


>ref|NP_568714.4| ATP-dependent Clp protease [Arabidopsis thaliana]
           gi|332008480|gb|AED95863.1| ATP-dependent Clp protease
           [Arabidopsis thaliana]
          Length = 608

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/96 (60%), Positives = 74/96 (77%)
 Frame = -3

Query: 439 GSSDDYDQIRAELNCPRCSKLMYVLFSNRPLSITGGETGIYQALNVCPSCRTAFYFRPLK 260
           G  DDYD IR+++NCPRCS  M+V+FSNRPLS+T  E GIYQA+N C  C+TAFYFRP K
Sbjct: 69  GGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCKTAFYFRPFK 128

Query: 259 LVPLQGSFIEIGRVQGYDSVSNDDDENGKVRVKIWE 152
           L PLQGSFIE+G+V+G D   +DDD++ K   + W+
Sbjct: 129 LSPLQGSFIELGKVKGTDDDHDDDDDDQKSFPRNWK 164


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