BLASTX nr result

ID: Panax21_contig00027970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027970
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72250.1| hypothetical protein VITISV_016331 [Vitis vinifera]   152   3e-35
emb|CBI27690.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...   150   1e-34
ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago t...   142   2e-32

>emb|CAN72250.1| hypothetical protein VITISV_016331 [Vitis vinifera]
          Length = 436

 Score =  152 bits (384), Expect = 3e-35
 Identities = 64/75 (85%), Positives = 72/75 (96%)
 Frame = -2

Query: 411 EMVTAGTYVCNDCYDKLVSFLLYWFRVSIPKYHLPPEASQREDCWYGYACRTQHHSEDHA 232
           EM+TAGTYVCN+CYDKLVSFLLYWFRVS+PK  LPP+AS+REDCWYGYACRTQ H+E+HA
Sbjct: 362 EMITAGTYVCNECYDKLVSFLLYWFRVSMPKSFLPPDASKREDCWYGYACRTQQHNEEHA 421

Query: 231 RKRNHVCRPTRGSNL 187
           RKRNHVCRPTRGSN+
Sbjct: 422 RKRNHVCRPTRGSNM 436


>emb|CBI27690.3| unnamed protein product [Vitis vinifera]
          Length = 1150

 Score =  150 bits (378), Expect = 1e-34
 Identities = 63/75 (84%), Positives = 71/75 (94%)
 Frame = -2

Query: 411  EMVTAGTYVCNDCYDKLVSFLLYWFRVSIPKYHLPPEASQREDCWYGYACRTQHHSEDHA 232
            EM+TA TYVCN+CYDKLVSFLLYWFRVS+PK  LPP+AS+REDCWYGYACRTQ H+E+HA
Sbjct: 1076 EMITASTYVCNECYDKLVSFLLYWFRVSMPKSFLPPDASKREDCWYGYACRTQQHNEEHA 1135

Query: 231  RKRNHVCRPTRGSNL 187
            RKRNHVCRPTRGSN+
Sbjct: 1136 RKRNHVCRPTRGSNM 1150


>ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Vitis vinifera]
          Length = 462

 Score =  150 bits (378), Expect = 1e-34
 Identities = 63/75 (84%), Positives = 71/75 (94%)
 Frame = -2

Query: 411 EMVTAGTYVCNDCYDKLVSFLLYWFRVSIPKYHLPPEASQREDCWYGYACRTQHHSEDHA 232
           EM+TA TYVCN+CYDKLVSFLLYWFRVS+PK  LPP+AS+REDCWYGYACRTQ H+E+HA
Sbjct: 388 EMITASTYVCNECYDKLVSFLLYWFRVSMPKSFLPPDASKREDCWYGYACRTQQHNEEHA 447

Query: 231 RKRNHVCRPTRGSNL 187
           RKRNHVCRPTRGSN+
Sbjct: 448 RKRNHVCRPTRGSNM 462


>ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|222871849|gb|EEF08980.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  148 bits (373), Expect = 5e-34
 Identities = 60/74 (81%), Positives = 70/74 (94%)
 Frame = -2

Query: 411 EMVTAGTYVCNDCYDKLVSFLLYWFRVSIPKYHLPPEASQREDCWYGYACRTQHHSEDHA 232
           EM+T GT+VCNDCYDKL+SFLLYWFR+S+P+  LPPEA+ REDCWYGYACRTQHH+EDHA
Sbjct: 391 EMITVGTHVCNDCYDKLISFLLYWFRISMPRNLLPPEAANREDCWYGYACRTQHHNEDHA 450

Query: 231 RKRNHVCRPTRGSN 190
           RKRNHVCRPTRG++
Sbjct: 451 RKRNHVCRPTRGNH 464


>ref|XP_003630425.1| E3 ubiquitin-protein ligase CHFR [Medicago truncatula]
           gi|355524447|gb|AET04901.1| E3 ubiquitin-protein ligase
           CHFR [Medicago truncatula]
          Length = 471

 Score =  142 bits (359), Expect = 2e-32
 Identities = 61/74 (82%), Positives = 67/74 (90%)
 Frame = -2

Query: 411 EMVTAGTYVCNDCYDKLVSFLLYWFRVSIPKYHLPPEASQREDCWYGYACRTQHHSEDHA 232
           EM+TAGT VC+DCY KLVSF LYWFR+S PK+ LPPEAS REDCWYGYACRTQH SE+HA
Sbjct: 397 EMMTAGTLVCSDCYQKLVSFFLYWFRISTPKHLLPPEASTREDCWYGYACRTQHRSEEHA 456

Query: 231 RKRNHVCRPTRGSN 190
           RKRNHVCRPTRGS+
Sbjct: 457 RKRNHVCRPTRGSH 470


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