BLASTX nr result

ID: Panax21_contig00027950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027950
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...    52   3e-08
ref|XP_003608262.1| hypothetical protein MTR_4g091430 [Medicago ...    49   2e-07

>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355477403|gb|AES58606.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 1106

 Score = 51.6 bits (122), Expect(2) = 3e-08
 Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
 Frame = -1

Query: 186 LRTI--IASMYKGLHSKLITFLYNLQTFKHWVDNILYKSCYH---SC--SLVLLPLGMYH 28
           LRT+   A++Y+G HSKLIT L  L TF+H     LY SCYH   SC  +   LP GM  
Sbjct: 557 LRTVRVTAAVYRGFHSKLITLL--LPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCR 614

Query: 27  FPSQKI 10
           FP+QKI
Sbjct: 615 FPNQKI 620



 Score = 30.8 bits (68), Expect(2) = 3e-08
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 233 YTICAGQYSCDKEFCYL 183
           YTI AG+Y CDKEF YL
Sbjct: 541 YTIRAGRYLCDKEFRYL 557


>ref|XP_003608262.1| hypothetical protein MTR_4g091430 [Medicago truncatula]
           gi|355509317|gb|AES90459.1| hypothetical protein
           MTR_4g091430 [Medicago truncatula]
          Length = 167

 Score = 49.3 bits (116), Expect(2) = 2e-07
 Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
 Frame = -1

Query: 177 IIASMYKGLHSKLITFLYNLQTFKHWVDNILYKSCYH---SC--SLVLLPLGMYHFPSQK 13
           +  ++Y+G HSKLIT L  L TF+H     LY SCYH   SC  +   LP GM  FP+QK
Sbjct: 89  VTIAVYRGFHSKLITLL--LPTFQHRAGVRLYTSCYHLAESCVFNKQSLPPGMCRFPNQK 146

Query: 12  I 10
           I
Sbjct: 147 I 147



 Score = 30.8 bits (68), Expect(2) = 2e-07
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 233 YTICAGQYSCDKEFCYL 183
           YTI AG+Y CDKEF YL
Sbjct: 68  YTIRAGRYLCDKEFRYL 84


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