BLASTX nr result

ID: Panax21_contig00027941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027941
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532159.1| DNA binding protein, putative [Ricinus commu...   171   6e-41
ref|XP_002317910.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_002322061.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis...   166   2e-39
ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [...   164   7e-39

>ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
           gi|223528169|gb|EEF30233.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 190

 Score =  171 bits (433), Expect = 6e-41
 Identities = 84/108 (77%), Positives = 100/108 (92%)
 Frame = -1

Query: 474 RRGQATDSHSLAERVRRGKINERLKCLQDIVPGCHKIMGMAVMLDEIINYVQSLQNQVDF 295
           RRGQATDSHSLAERVRRGKINERL+CLQDIVPGC+K MGMAVMLDEIINYVQSLQNQV+F
Sbjct: 76  RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 135

Query: 294 LSMKLSAASTFHDFNLDRNAMETLQRAKAYEAQLMQRVVRRGYEELSS 151
           LSMKL+AASTF+DFN + +A+ET+QRAKA EA+ ++RV++ GY  L++
Sbjct: 136 LSMKLTAASTFYDFNSETDAIETMQRAKAQEAKEIERVMKEGYGGLTN 183


>ref|XP_002317910.1| predicted protein [Populus trichocarpa] gi|222858583|gb|EEE96130.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  169 bits (428), Expect = 2e-40
 Identities = 83/102 (81%), Positives = 95/102 (93%)
 Frame = -1

Query: 474 RRGQATDSHSLAERVRRGKINERLKCLQDIVPGCHKIMGMAVMLDEIINYVQSLQNQVDF 295
           RRGQATDSHSLAERVRRGKINERL+CLQDIVPGC+K MGMAVMLDEIINYVQSLQNQV+F
Sbjct: 159 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 218

Query: 294 LSMKLSAASTFHDFNLDRNAMETLQRAKAYEAQLMQRVVRRG 169
           LSMKL+AASTF+DFN + +A+ET+QRAKA EA+ +QR +R G
Sbjct: 219 LSMKLTAASTFYDFNAETDAIETMQRAKAQEAKELQRAMREG 260


>ref|XP_002322061.1| predicted protein [Populus trichocarpa] gi|222869057|gb|EEF06188.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/102 (80%), Positives = 93/102 (91%)
 Frame = -1

Query: 474 RRGQATDSHSLAERVRRGKINERLKCLQDIVPGCHKIMGMAVMLDEIINYVQSLQNQVDF 295
           RRGQATDSHSLAERVRRGKINERL+CLQDIVPGC+K MGMAVMLDEIINYVQSLQNQV+F
Sbjct: 160 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 219

Query: 294 LSMKLSAASTFHDFNLDRNAMETLQRAKAYEAQLMQRVVRRG 169
           LSMKL+AASTF+DFN +  A+ET+QRAKA E + +QR +R G
Sbjct: 220 LSMKLTAASTFYDFNAETEAIETVQRAKAQETKELQRAMREG 261


>ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
           gi|297734215|emb|CBI15462.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score =  166 bits (419), Expect = 2e-39
 Identities = 85/121 (70%), Positives = 97/121 (80%)
 Frame = -1

Query: 474 RRGQATDSHSLAERVRRGKINERLKCLQDIVPGCHKIMGMAVMLDEIINYVQSLQNQVDF 295
           RRGQATDSHSLAERVRRGKINERL+CLQDIVPGC+K MGMAVMLDEIINYVQSLQNQV+F
Sbjct: 150 RRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 209

Query: 294 LSMKLSAASTFHDFNLDRNAMETLQRAKAYEAQLMQRVVRRGYEELSSTQLGPFDLSFGS 115
           LSMKL+AAS ++DFN D + +ET+QR K +             E+  STQ GP DL+FGS
Sbjct: 210 LSMKLTAASQYYDFNSDTDTLETIQRGKVHG------------EQPPSTQHGPIDLTFGS 257

Query: 114 Y 112
           Y
Sbjct: 258 Y 258


>ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
           gi|449532109|ref|XP_004173026.1| PREDICTED:
           transcription factor BEE 3-like [Cucumis sativus]
          Length = 265

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/103 (76%), Positives = 96/103 (93%)
 Frame = -1

Query: 474 RRGQATDSHSLAERVRRGKINERLKCLQDIVPGCHKIMGMAVMLDEIINYVQSLQNQVDF 295
           RRGQATDSHSLAERVRRGKINERL+CL+DIVPGC+K MGMAVMLDEIINYVQSLQNQV+F
Sbjct: 151 RRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEF 210

Query: 294 LSMKLSAASTFHDFNLDRNAMETLQRAKAYEAQLMQRVVRRGY 166
           LSMKL+AAS+F+DFN + +A+  LQRAKA+EA+ ++R+++ GY
Sbjct: 211 LSMKLAAASSFYDFNSEADAISKLQRAKAHEAKELERLMKEGY 253


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