BLASTX nr result

ID: Panax21_contig00027934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027934
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519813.1| Auxin response factor, putative [Ricinus com...   328   3e-88
ref|XP_002331440.1| predicted protein [Populus trichocarpa] gi|2...   323   1e-86
ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vit...   323   1e-86
emb|CBI24055.3| unnamed protein product [Vitis vinifera]              323   1e-86
ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersic...   321   4e-86

>ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
           gi|223541052|gb|EEF42609.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 1109

 Score =  328 bits (841), Expect = 3e-88
 Identities = 159/182 (87%), Positives = 168/182 (92%)
 Frame = +3

Query: 3   ELVARDLHDSVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGI 182
           ELVARDLHD++WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD+KQQLLLGI
Sbjct: 178 ELVARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDDKQQLLLGI 237

Query: 183 RRANRQPPNLSTSVLSSESMHIGILXXXXXXXXNNSPFTVFYNPRTSPSEFVIPLAKYYT 362
           RRANRQP NLS+SVLSS+SMHIGIL        NNSPFTVFYNPR SPSEFVIPLAKYY 
Sbjct: 238 RRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYK 297

Query: 363 AVCNSQISLGMRFWMMFETEESGRRRYMGTITGINDLDSVRWKNSQWRNLQVGWDESTAG 542
           AVC++QISLGMRF MMFETEESG RRYMGTITGI+DLD VRWKNSQWRNLQVGWDESTAG
Sbjct: 298 AVCSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAG 357

Query: 543 ER 548
           E+
Sbjct: 358 EK 359


>ref|XP_002331440.1| predicted protein [Populus trichocarpa] gi|222873654|gb|EEF10785.1|
           predicted protein [Populus trichocarpa]
          Length = 1113

 Score =  323 bits (828), Expect = 1e-86
 Identities = 158/182 (86%), Positives = 168/182 (92%)
 Frame = +3

Query: 3   ELVARDLHDSVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGI 182
           ELVARDLHD+VWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLF+RDEKQQLLLGI
Sbjct: 169 ELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFMRDEKQQLLLGI 228

Query: 183 RRANRQPPNLSTSVLSSESMHIGILXXXXXXXXNNSPFTVFYNPRTSPSEFVIPLAKYYT 362
           RRANRQP NLS+SVLSS+SMHIGIL        NNSPFTV+YNPR SPSEFVIPLAKYY 
Sbjct: 229 RRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVYYNPRASPSEFVIPLAKYYK 288

Query: 363 AVCNSQISLGMRFWMMFETEESGRRRYMGTITGINDLDSVRWKNSQWRNLQVGWDESTAG 542
           AV ++QISLGMRF MMFETEESG RR+MGTITGI+DLD+VRWKNSQWRNLQVGWDESTAG
Sbjct: 289 AVYSNQISLGMRFRMMFETEESGTRRHMGTITGISDLDAVRWKNSQWRNLQVGWDESTAG 348

Query: 543 ER 548
           ER
Sbjct: 349 ER 350


>ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
          Length = 1117

 Score =  323 bits (827), Expect = 1e-86
 Identities = 158/182 (86%), Positives = 166/182 (91%)
 Frame = +3

Query: 3   ELVARDLHDSVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGI 182
           ELVA+DLHD+VWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGD+VLFIRDEKQQLLLGI
Sbjct: 174 ELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGI 233

Query: 183 RRANRQPPNLSTSVLSSESMHIGILXXXXXXXXNNSPFTVFYNPRTSPSEFVIPLAKYYT 362
           RRANRQP NLS+SVLSS+SMHIGIL        NNSPFTVFYNPR SPSEFVIPLAKYY 
Sbjct: 234 RRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYK 293

Query: 363 AVCNSQISLGMRFWMMFETEESGRRRYMGTITGINDLDSVRWKNSQWRNLQVGWDESTAG 542
           A  ++QISLGMRF MMFETEESG RRYMGTITGI+DLD VRWKNSQWRNLQVGWDESTAG
Sbjct: 294 AAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAG 353

Query: 543 ER 548
           ER
Sbjct: 354 ER 355


>emb|CBI24055.3| unnamed protein product [Vitis vinifera]
          Length = 1034

 Score =  323 bits (827), Expect = 1e-86
 Identities = 158/182 (86%), Positives = 166/182 (91%)
 Frame = +3

Query: 3   ELVARDLHDSVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGI 182
           ELVA+DLHD+VWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGD+VLFIRDEKQQLLLGI
Sbjct: 172 ELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGI 231

Query: 183 RRANRQPPNLSTSVLSSESMHIGILXXXXXXXXNNSPFTVFYNPRTSPSEFVIPLAKYYT 362
           RRANRQP NLS+SVLSS+SMHIGIL        NNSPFTVFYNPR SPSEFVIPLAKYY 
Sbjct: 232 RRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYK 291

Query: 363 AVCNSQISLGMRFWMMFETEESGRRRYMGTITGINDLDSVRWKNSQWRNLQVGWDESTAG 542
           A  ++QISLGMRF MMFETEESG RRYMGTITGI+DLD VRWKNSQWRNLQVGWDESTAG
Sbjct: 292 AAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAG 351

Query: 543 ER 548
           ER
Sbjct: 352 ER 353


>ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
           gi|298570957|gb|ADI87602.1| auxin response factor 19
           [Solanum lycopersicum] gi|307091363|gb|ADN28050.1| auxin
           response factor 19 [Solanum lycopersicum]
          Length = 1112

 Score =  321 bits (823), Expect = 4e-86
 Identities = 158/182 (86%), Positives = 165/182 (90%)
 Frame = +3

Query: 3   ELVARDLHDSVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGI 182
           ELVARDLHD++WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGI
Sbjct: 174 ELVARDLHDNLWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGI 233

Query: 183 RRANRQPPNLSTSVLSSESMHIGILXXXXXXXXNNSPFTVFYNPRTSPSEFVIPLAKYYT 362
           RRANRQP NLS+SVLSS+SMHIGIL        NNSPFTVFYNPR S SEFVIPLAKYY 
Sbjct: 234 RRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASHSEFVIPLAKYYK 293

Query: 363 AVCNSQISLGMRFWMMFETEESGRRRYMGTITGINDLDSVRWKNSQWRNLQVGWDESTAG 542
           A  +SQ+SLGMRF MMFETEESG RRYMGTITGI+DLD VRWKNSQWRNLQVGWDESTAG
Sbjct: 294 ATYSSQVSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAG 353

Query: 543 ER 548
           ER
Sbjct: 354 ER 355


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