BLASTX nr result

ID: Panax21_contig00027926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027926
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189517.1| uncharacterized protein [Arabidopsis thalian...   106   3e-21
ref|NP_001189516.1| uncharacterized protein [Arabidopsis thalian...   106   3e-21
ref|XP_002534745.1| conserved hypothetical protein [Ricinus comm...    75   8e-12
emb|CBI33204.3| unnamed protein product [Vitis vinifera]               64   3e-08
emb|CAN61886.1| hypothetical protein VITISV_030710 [Vitis vinifera]    55   1e-06

>ref|NP_001189517.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330250991|gb|AEC06085.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 346

 Score =  106 bits (265), Expect = 3e-21
 Identities = 51/58 (87%), Positives = 52/58 (89%)
 Frame = -1

Query: 174 GRSEQQGTPRRRFSYWAAVSRSRGRSAPCPRIWVICSHTMLLQSDLAGERSQFATENK 1
           GRSEQ+GTPRRRF  WAAVSRSRGRSAPCPR WVICS  MLLQSDLAGERSQFA ENK
Sbjct: 237 GRSEQEGTPRRRFYSWAAVSRSRGRSAPCPRRWVICSQKMLLQSDLAGERSQFAAENK 294



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 48/87 (55%), Positives = 51/87 (58%)
 Frame = -3

Query: 586 SDPPDDKLNSALLLSRRTYPPRDSWNFCGLRWGKSTKARQIDRLLSRC*GRARKKRIVFE 407
           S+PPD+KLNSALLLSRRTYPPRDSWNF                                 
Sbjct: 184 SNPPDEKLNSALLLSRRTYPPRDSWNF--------------------------------- 210

Query: 406 PAPPFGYAGTKSPLTTNQQTSSGWVLP 326
            +PPF YA TKSPLTTNQQTSSGWVLP
Sbjct: 211 -SPPFEYADTKSPLTTNQQTSSGWVLP 236


>ref|NP_001189516.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330250990|gb|AEC06084.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 261

 Score =  106 bits (265), Expect = 3e-21
 Identities = 51/58 (87%), Positives = 52/58 (89%)
 Frame = -1

Query: 174 GRSEQQGTPRRRFSYWAAVSRSRGRSAPCPRIWVICSHTMLLQSDLAGERSQFATENK 1
           GRSEQ+GTPRRRF  WAAVSRSRGRSAPCPR WVICS  MLLQSDLAGERSQFA ENK
Sbjct: 152 GRSEQEGTPRRRFYSWAAVSRSRGRSAPCPRRWVICSQKMLLQSDLAGERSQFAAENK 209



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 49/87 (56%), Positives = 51/87 (58%)
 Frame = -3

Query: 586 SDPPDDKLNSALLLSRRTYPPRDSWNFCGLRWGKSTKARQIDRLLSRC*GRARKKRIVFE 407
           SDPPD+KLNSALLLSRRTYPPRDSWNF                                 
Sbjct: 99  SDPPDEKLNSALLLSRRTYPPRDSWNF--------------------------------- 125

Query: 406 PAPPFGYAGTKSPLTTNQQTSSGWVLP 326
            +PPF YA TKSPLTTNQQTSSGWVLP
Sbjct: 126 -SPPFEYADTKSPLTTNQQTSSGWVLP 151


>ref|XP_002534745.1| conserved hypothetical protein [Ricinus communis]
           gi|223524642|gb|EEF27636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 44/85 (51%), Positives = 47/85 (55%)
 Frame = +3

Query: 150 AFPVAPISPTPRTLSGPKSHS*LLFXXXXXXXXXXXXXXXXXXXXXXXXXXHLFLVVDTG 329
           AFP+API P PRTLSGP++     F                            FLVVDTG
Sbjct: 36  AFPLAPIPPMPRTLSGPRAIVSCCFHLVV-----------------------FFLVVDTG 72

Query: 330 KTQPDDVCWLVVRGLLVPAYPKGGA 404
           KTQPDDV WLVVRGLLV AYPKG A
Sbjct: 73  KTQPDDVYWLVVRGLLVSAYPKGDA 97


>emb|CBI33204.3| unnamed protein product [Vitis vinifera]
          Length = 60

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/32 (93%), Positives = 30/32 (93%)
 Frame = +2

Query: 86  GQGAERPLDLLTAAQ*EKRRLGVPCCSDLPYA 181
           GQGAERPLDLLTAAQ EKR LGVPCCSDLPYA
Sbjct: 29  GQGAERPLDLLTAAQEEKRVLGVPCCSDLPYA 60


>emb|CAN61886.1| hypothetical protein VITISV_030710 [Vitis vinifera]
          Length = 273

 Score = 54.7 bits (130), Expect(2) = 1e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 382 GTKSPLTTNQQTSSGWVLPVSTTRNK 305
           GTKSPLTTNQQTSSGWVLPVSTTR K
Sbjct: 155 GTKSPLTTNQQTSSGWVLPVSTTRKK 180



 Score = 23.1 bits (48), Expect(2) = 1e-06
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 222 TATNYGSW 199
           TATNYGSW
Sbjct: 188 TATNYGSW 195


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