BLASTX nr result
ID: Panax21_contig00027925
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00027925 (572 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-... 62 5e-08 emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera] 62 5e-08 ref|XP_002458261.1| hypothetical protein SORBIDRAFT_03g030160 [S... 56 4e-06 ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-... 55 6e-06 emb|CAN64721.1| hypothetical protein VITISV_026722 [Vitis vinifera] 55 6e-06 >ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera] Length = 208 Score = 62.4 bits (150), Expect = 5e-08 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 7/166 (4%) Frame = -3 Query: 531 TGIYDVDMNGVSMKTRVADQADLVDIGIHELNTELLNMKPPLVGLDVK-------ECKGS 373 T Y V+ G +++T + D+A +VD + E+ + KP +VGLD++ Sbjct: 14 TSKYSVNFAGKTIETTLTDKAAIVDEWVQEI-LSIYAGKPMVVGLDIEWRPNRIPSMSNK 72 Query: 372 TRLFILRTGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIERMIINILGF 193 + L +CLI+QL Y+D P+S+ GFL D + FVG +G I ++ N G Sbjct: 73 SATLQLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKLK----NEYGL 128 Query: 192 ERECILRNIVLEMGDLAARILKKPNLSKSSLQEIAREIGILDDVKP 55 E C +L M R + L+++A E+ L KP Sbjct: 129 ECSCSADVRILAMQRWPGR------FRRPGLKDLAWEVVNLRMKKP 168 >emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera] Length = 219 Score = 62.4 bits (150), Expect = 5e-08 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 7/166 (4%) Frame = -3 Query: 531 TGIYDVDMNGVSMKTRVADQADLVDIGIHELNTELLNMKPPLVGLDVK-------ECKGS 373 T Y V+ G +++T + D+A +VD + E+ + KP +VGLD++ Sbjct: 25 TSKYSVNFAGKTIETTLTDKAAIVDEWVQEI-LSIYAGKPMVVGLDIEWRPNRIPSMSNK 83 Query: 372 TRLFILRTGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIERMIINILGF 193 + L +CLI+QL Y+D P+S+ GFL D + FVG +G I ++ N G Sbjct: 84 SATLQLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKLK----NEYGL 139 Query: 192 ERECILRNIVLEMGDLAARILKKPNLSKSSLQEIAREIGILDDVKP 55 E C +L M R + L+++A E+ L KP Sbjct: 140 ECSCSADVRILAMQRWPGR------FRRPGLKDLAWEVVNLRMKKP 179 >ref|XP_002458261.1| hypothetical protein SORBIDRAFT_03g030160 [Sorghum bicolor] gi|241930236|gb|EES03381.1| hypothetical protein SORBIDRAFT_03g030160 [Sorghum bicolor] Length = 226 Score = 56.2 bits (134), Expect = 4e-06 Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 17/173 (9%) Frame = -3 Query: 531 TGIYDVDM---NGVSMKTRVADQADLVDIGIHELNTELLNMKPP-LVGLDVK-------E 385 TG YD D+ +G ++T + D V++ + E+ + + PP +VGLD + + Sbjct: 3 TGTYDTDVVMDDGTVIRTTITSSGDAVNLFLREVRKQAGHGHPPHIVGLDTEWRIVHDED 62 Query: 384 CKGSTRLFILR--TGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIERMI 211 + R+ +L+ G RCL+ Q+ + D P ++ FL F+G ++ + + Sbjct: 63 GRRKNRMAVLQLCVGHRCLVYQIFHADYVPDALRDFLACPDHRFLGVAVDGDVKRL---- 118 Query: 210 INILGFERECILRNIVLEMGDL---AARILKKPNLSKSSLQEIAREI-GILDD 64 +C L +V + DL AA +L +P L +SL+ + RE+ G+L D Sbjct: 119 ------SEDCGL--VVADAADLRHVAAEVLARPELRTASLKTLTREVMGVLID 163 >ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera] Length = 210 Score = 55.5 bits (132), Expect = 6e-06 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%) Frame = -3 Query: 531 TGIYDVDMNGVSMKTRVADQADLVDIGIHELNTELLNMKPPLVGLDV-------KECKGS 373 T Y V + G +++T + D+A + D + E+ + KP +VGLD+ + Sbjct: 17 TSKYSVILAGKTIETTLTDKAAIADEWVREI-LSIHAGKPMVVGLDIEWRPHPIRSMSNK 75 Query: 372 TRLFILRTGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIE 220 + L +CLI+QL Y+D P+S+ FL D + FVG +G I+ ++ Sbjct: 76 SATLQLCIDDKCLILQLFYMDEIPESLKSFLADSNFTFVGIEVGDDIAKLK 126 >emb|CAN64721.1| hypothetical protein VITISV_026722 [Vitis vinifera] Length = 196 Score = 55.5 bits (132), Expect = 6e-06 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%) Frame = -3 Query: 531 TGIYDVDMNGVSMKTRVADQADLVDIGIHELNTELLNMKPPLVGLDV-------KECKGS 373 T Y V + G +++T + D+A + D + E+ + KP +VGLD+ + Sbjct: 17 TSKYSVILAGKTIETTLTDKAAIADEWVREI-LSIHAGKPMVVGLDIEWRPHPIRSMSNK 75 Query: 372 TRLFILRTGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIE 220 + L +CLI+QL Y+D P+S+ FL D + FVG +G I+ ++ Sbjct: 76 SATLQLCIDDKCLILQLFYMDEIPESLKSFLADSNFTFVGIEVGDDIAKLK 126