BLASTX nr result

ID: Panax21_contig00027925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027925
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-...    62   5e-08
emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera]    62   5e-08
ref|XP_002458261.1| hypothetical protein SORBIDRAFT_03g030160 [S...    56   4e-06
ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-...    55   6e-06
emb|CAN64721.1| hypothetical protein VITISV_026722 [Vitis vinifera]    55   6e-06

>ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
          Length = 208

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
 Frame = -3

Query: 531 TGIYDVDMNGVSMKTRVADQADLVDIGIHELNTELLNMKPPLVGLDVK-------ECKGS 373
           T  Y V+  G +++T + D+A +VD  + E+   +   KP +VGLD++            
Sbjct: 14  TSKYSVNFAGKTIETTLTDKAAIVDEWVQEI-LSIYAGKPMVVGLDIEWRPNRIPSMSNK 72

Query: 372 TRLFILRTGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIERMIINILGF 193
           +    L    +CLI+QL Y+D  P+S+ GFL D +  FVG  +G  I  ++    N  G 
Sbjct: 73  SATLQLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKLK----NEYGL 128

Query: 192 ERECILRNIVLEMGDLAARILKKPNLSKSSLQEIAREIGILDDVKP 55
           E  C     +L M     R        +  L+++A E+  L   KP
Sbjct: 129 ECSCSADVRILAMQRWPGR------FRRPGLKDLAWEVVNLRMKKP 168


>emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera]
          Length = 219

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
 Frame = -3

Query: 531 TGIYDVDMNGVSMKTRVADQADLVDIGIHELNTELLNMKPPLVGLDVK-------ECKGS 373
           T  Y V+  G +++T + D+A +VD  + E+   +   KP +VGLD++            
Sbjct: 25  TSKYSVNFAGKTIETTLTDKAAIVDEWVQEI-LSIYAGKPMVVGLDIEWRPNRIPSMSNK 83

Query: 372 TRLFILRTGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIERMIINILGF 193
           +    L    +CLI+QL Y+D  P+S+ GFL D +  FVG  +G  I  ++    N  G 
Sbjct: 84  SATLQLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKLK----NEYGL 139

Query: 192 ERECILRNIVLEMGDLAARILKKPNLSKSSLQEIAREIGILDDVKP 55
           E  C     +L M     R        +  L+++A E+  L   KP
Sbjct: 140 ECSCSADVRILAMQRWPGR------FRRPGLKDLAWEVVNLRMKKP 179


>ref|XP_002458261.1| hypothetical protein SORBIDRAFT_03g030160 [Sorghum bicolor]
           gi|241930236|gb|EES03381.1| hypothetical protein
           SORBIDRAFT_03g030160 [Sorghum bicolor]
          Length = 226

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
 Frame = -3

Query: 531 TGIYDVDM---NGVSMKTRVADQADLVDIGIHELNTELLNMKPP-LVGLDVK-------E 385
           TG YD D+   +G  ++T +    D V++ + E+  +  +  PP +VGLD +       +
Sbjct: 3   TGTYDTDVVMDDGTVIRTTITSSGDAVNLFLREVRKQAGHGHPPHIVGLDTEWRIVHDED 62

Query: 384 CKGSTRLFILR--TGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIERMI 211
            +   R+ +L+   G RCL+ Q+ + D  P ++  FL      F+G ++   +  +    
Sbjct: 63  GRRKNRMAVLQLCVGHRCLVYQIFHADYVPDALRDFLACPDHRFLGVAVDGDVKRL---- 118

Query: 210 INILGFERECILRNIVLEMGDL---AARILKKPNLSKSSLQEIAREI-GILDD 64
                   +C L  +V +  DL   AA +L +P L  +SL+ + RE+ G+L D
Sbjct: 119 ------SEDCGL--VVADAADLRHVAAEVLARPELRTASLKTLTREVMGVLID 163


>ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
          Length = 210

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = -3

Query: 531 TGIYDVDMNGVSMKTRVADQADLVDIGIHELNTELLNMKPPLVGLDV-------KECKGS 373
           T  Y V + G +++T + D+A + D  + E+   +   KP +VGLD+       +     
Sbjct: 17  TSKYSVILAGKTIETTLTDKAAIADEWVREI-LSIHAGKPMVVGLDIEWRPHPIRSMSNK 75

Query: 372 TRLFILRTGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIE 220
           +    L    +CLI+QL Y+D  P+S+  FL D +  FVG  +G  I+ ++
Sbjct: 76  SATLQLCIDDKCLILQLFYMDEIPESLKSFLADSNFTFVGIEVGDDIAKLK 126


>emb|CAN64721.1| hypothetical protein VITISV_026722 [Vitis vinifera]
          Length = 196

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
 Frame = -3

Query: 531 TGIYDVDMNGVSMKTRVADQADLVDIGIHELNTELLNMKPPLVGLDV-------KECKGS 373
           T  Y V + G +++T + D+A + D  + E+   +   KP +VGLD+       +     
Sbjct: 17  TSKYSVILAGKTIETTLTDKAAIADEWVREI-LSIHAGKPMVVGLDIEWRPHPIRSMSNK 75

Query: 372 TRLFILRTGRRCLIIQLSYLDSTPKSVSGFLNDQSICFVGFSMGHKISTIE 220
           +    L    +CLI+QL Y+D  P+S+  FL D +  FVG  +G  I+ ++
Sbjct: 76  SATLQLCIDDKCLILQLFYMDEIPESLKSFLADSNFTFVGIEVGDDIAKLK 126


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