BLASTX nr result

ID: Panax21_contig00027924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027924
         (1777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282620.1| PREDICTED: probable LRR receptor-like serine...   208   4e-51
ref|XP_002455766.1| hypothetical protein SORBIDRAFT_03g024540 [S...    69   3e-09
ref|XP_002894343.1| kinase family protein [Arabidopsis lyrata su...    69   5e-09
ref|NP_175606.2| LysM type receptor kinase-like protein [Arabido...    67   1e-08
ref|XP_002299738.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-08

>ref|XP_002282620.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g51810-like [Vitis vinifera]
          Length = 593

 Score =  208 bits (529), Expect = 4e-51
 Identities = 95/187 (50%), Positives = 132/187 (70%), Gaps = 1/187 (0%)
 Frame = -2

Query: 864 ENFLLGLVIFTSLACFSHCFRVNYIACNASSTKLCPAFLHYVPIEPKTIEETTSLFHDNS 685
           +  L+  +IFT LAC  HCF V+ + CN S  + CPA L+YVP  PKT+    SLFH +S
Sbjct: 9   KKILVAFMIFTLLACIGHCFHVSSLPCNVSLAQSCPASLYYVPNSPKTLAAAASLFHVDS 68

Query: 684 NSINRTLSGFAIAVSCGCPDYHDGFTYHIEYTVQPGDTWKVISSNFGFLVVEKPDKALFP 505
           N + +T+ G+ + V+C CP  H  FT+H++YTVQPGDTW+ ISS+FG  VV+K DK L  
Sbjct: 69  NLVRQTVEGYLVNVNCSCPAGHTAFTWHMDYTVQPGDTWERISSSFGSFVVKKTDKMLIS 128

Query: 504 SLNITLYILCGCSA-NMEILTYKIESGDTLFTICARFDANVEKTEKLNKLENQDLIFAGK 328
           S N+TL +LCGCS  N  I+TY+++ GDTL+TIC+RF A++ +T +LN ++N  LI  G 
Sbjct: 129 SQNVTLDLLCGCSKDNKVIVTYRVKHGDTLYTICSRFSADLNQTVQLNGIDNSGLIHDGD 188

Query: 327 VLYIPEP 307
           V++IPEP
Sbjct: 189 VIFIPEP 195


>ref|XP_002455766.1| hypothetical protein SORBIDRAFT_03g024540 [Sorghum bicolor]
           gi|241927741|gb|EES00886.1| hypothetical protein
           SORBIDRAFT_03g024540 [Sorghum bicolor]
          Length = 618

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 15/173 (8%)
 Frame = -2

Query: 786 CNASSTK-LCPAFLHYVPIEPKTIEETTSLFHDNSN---SINRTLSG---FAIAVSCGCP 628
           C+A S    C +FL+  P + +++ E  S+F+ N++   +INR LSG     + V+C C 
Sbjct: 42  CDAVSINPSCGSFLYVTP-QGRSLSEIVSVFNGNASLIQTINR-LSGSQDLLMGVACKCQ 99

Query: 627 DYHD---GFTYHIEYTVQPGDTWKVISSN-FGFLVVEKPDKA-LFPSLNITLYILCGCS- 466
              +    F +  +Y V+P DT   + SN F  L +   D + L P   IT+++ CGCS 
Sbjct: 100 AISNTTTAFFHDTQYKVEPDDTPGEVKSNTFSGLAMNVGDGSELTPGNTITVHLPCGCSS 159

Query: 465 -ANMEILTYKIESGDTLFTICARFDANVEKTEKLN-KLENQDLIFAGKVLYIP 313
            A+  IL+Y ++  DTL TI   F ++ +    LN  + N D I  G +L+IP
Sbjct: 160 TASEGILSYSVQEEDTLLTIANLFHSSPQDILNLNPSVTNPDFIKPGWILFIP 212


>ref|XP_002894343.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340185|gb|EFH70602.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 634

 Score = 68.6 bits (166), Expect = 5e-09
 Identities = 45/172 (26%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
 Frame = -2

Query: 780 ASSTKLCPAFLHYVPIEPKTIEETTSLFHDNSNSINRTLSG--FAIAVSCGCPDYHDGFT 607
           + +++LC +FL + P + ++     S+F      I   +SG  F I  +C C      +T
Sbjct: 4   SDTSRLCTSFLAFKPNQNQSFSVIQSMFDVLPADITADISGGYFFIKKNCSCLTTTHQYT 63

Query: 606 YHIEYTVQP--GDTWKVISSNF-GFLVVEKPDKALFPSLNITLYILCGCSANM--EILTY 442
            +  +T++   G  + V+ S + G        +A      +++ +LCGCS+ +   +++Y
Sbjct: 64  TNTTFTIRQNVGYVYNVVVSAYSGLAFPPNTRRAARAGSVVSVQLLCGCSSGLWNYLMSY 123

Query: 441 KIESGDTLFTICARFDANVEKTEKLNKLENQDLIFAGKVLYIP---EPGRSF 295
              +GD++ ++ +RF  ++++ E++N++ N D I AG VLYIP    PG ++
Sbjct: 124 VAVAGDSVQSLSSRFGVSMDRIEEVNEILNLDNITAGDVLYIPLDSVPGEAY 175


>ref|NP_175606.2| LysM type receptor kinase-like protein [Arabidopsis thaliana]
           gi|443286780|sp|F4IB81.1|LYK3_ARATH RecName: Full=LysM
           domain receptor-like kinase 3; Short=LysM-containing
           receptor-like kinase 3; Flags: Precursor
           gi|332194616|gb|AEE32737.1| LysM type receptor
           kinase-like protein [Arabidopsis thaliana]
          Length = 651

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 43/163 (26%), Positives = 85/163 (52%), Gaps = 7/163 (4%)
 Frame = -2

Query: 780 ASSTKLCPAFLHYVPIEPKTIEETTSLFHDNSNSINRTLSG--FAIAVSCGCPDYHDGFT 607
           + +T+LC +FL + P + ++     S+F      I   +SG  F I  +C C      +T
Sbjct: 25  SDTTRLCSSFLAFKPNQNQSFSVIQSMFDVLPQDITADISGGYFFIKKNCSCLTTTHQYT 84

Query: 606 YHIEYTVQP--GDTWKV-ISSNFGFLVVEKPDKALFPSLNITLYILCGCSANM--EILTY 442
            +  +T++   G  + V +S+  G        +A      +++ +LCGCS+ +   +++Y
Sbjct: 85  TNTTFTIRQNVGYVYNVTVSAYSGLAFPPNTTRAARAGAVVSVQLLCGCSSGLWNYLMSY 144

Query: 441 KIESGDTLFTICARFDANVEKTEKLNKLENQDLIFAGKVLYIP 313
              +GD++ ++ +RF  ++++ E +N + N D I AG +LYIP
Sbjct: 145 VAMAGDSVQSLSSRFGVSMDRIEDVNGILNLDNITAGDLLYIP 187


>ref|XP_002299738.1| predicted protein [Populus trichocarpa] gi|222846996|gb|EEE84543.1|
           predicted protein [Populus trichocarpa]
          Length = 664

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
 Frame = -2

Query: 861 NFLLGLVIFTSLACFS-HCFRVNYIACNASSTKLCPAFLHYVPIEPKTIEETTSLFHDNS 685
           +FL+ ++ F  L     H F    + C   +T+LC +FL + P E  T+    S+F    
Sbjct: 8   SFLIQVLCFLCLQIQPLHSFSTQPMNCT-DTTRLCTSFLAFKPQENLTLAMIQSMFDVLP 66

Query: 684 NSINRTLSGFA---IAVSCGCPDYHDGFTYHIEYTVQPGDTWK---VISSNFGFLVVEKP 523
             + R  +G     I  +C C      +  +  YTV+    +    VI++  G   +   
Sbjct: 67  QDVTREGNGHGYIFIKKNCSCLSKDKVYVTNSTYTVKFSGGYVYDIVINAYDGLAFLPNT 126

Query: 522 DKALFPSLNITLYILCGCSANM--EILTYKIESGDTLFTICARFDANVEKTEKLNKLENQ 349
            +       ++L + CGCS+ +   +++Y ++ GDT+ ++ +RF  +++  E +N ++N 
Sbjct: 127 TRQAKVGAVVSLRLFCGCSSGLWNYLVSYVMKEGDTVQSLSSRFGVSMDNIETVNGIQNP 186

Query: 348 DLIFAGKVLYIP 313
           D + AG + YIP
Sbjct: 187 DNVTAGALYYIP 198


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