BLASTX nr result

ID: Panax21_contig00027900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027900
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   196   2e-48
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...   170   1e-40
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...   165   3e-39
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro...   165   3e-39

>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score =  196 bits (497), Expect = 2e-48
 Identities = 106/165 (64%), Positives = 122/165 (73%), Gaps = 2/165 (1%)
 Frame = +2

Query: 2   PGGSAQTREYYXXXXXXXXXXXXXXXXIRKTAAAVVAEIDDLKAVSNAKVSPETIDYVNG 181
           PGGSAQTR+YY                IRKTAAAVVA++D+ K+VSNAKVSP TIDY +G
Sbjct: 402 PGGSAQTRDYYSDSSSRRRKSLDRSNSIRKTAAAVVADLDESKSVSNAKVSPATIDYFHG 461

Query: 182 GKVLNGDRVLRHSNSNSLRDDCSETFELGFRDNASVIGNTGELKGSKKSRRWS--WNIWG 355
            K++  D+ LR SNSNSLRDDCSETFE+ FRD ASV GN GE KGSKKS RWS  WNIWG
Sbjct: 462 PKLIPADKDLRDSNSNSLRDDCSETFEMAFRDAASVTGN-GERKGSKKSSRWSKAWNIWG 520

Query: 356 LIHPRGGGNKDEEEERYSSRGNGVERSLSESWQELRREGDGEARG 490
            IH R  G KDE+++R+ SR NGVERSLSESW ELR E +G+ RG
Sbjct: 521 FIH-RRSGTKDEDDDRF-SRVNGVERSLSESWPELRGERNGDVRG 563


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score =  170 bits (430), Expect = 1e-40
 Identities = 102/169 (60%), Positives = 115/169 (68%), Gaps = 13/169 (7%)
 Frame = +2

Query: 2   PGGSAQTREYYXXXXXXXXXXXXXXXXIRKTAAAVVAEIDDLKA----VSNAKVSPETID 169
           PGGSAQTR+YY                IRKTAAAVVAEID+LK+    +SN+KVSP T  
Sbjct: 411 PGGSAQTRDYYSDSSSRRRKSLDRSNSIRKTAAAVVAEIDELKSAASVISNSKVSPATTT 470

Query: 170 -------YVNGGKVLNGDRVLRHSNSNSLRDDCSETFELGFRDNASVIGNTGELKGSKKS 328
                  Y++G K++  DR   +SNSNSLRDDCSETFE+GFRDNA      GE KG+KKS
Sbjct: 471 STMTADYYIHGPKLVLPDRD-SNSNSNSLRDDCSETFEMGFRDNAV---ENGERKGAKKS 526

Query: 329 RRWS--WNIWGLIHPRGGGNKDEEEERYSSRGNGVERSLSESWQELRRE 469
           RRWS  WNIWG IH R   NKDEEE+RY SRGNGVERS SESW ELR E
Sbjct: 527 RRWSKAWNIWGFIH-RRSVNKDEEEDRY-SRGNGVERSFSESWPELRGE 573


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  166 bits (420), Expect = 2e-39
 Identities = 94/165 (56%), Positives = 109/165 (66%), Gaps = 2/165 (1%)
 Frame = +2

Query: 2   PGGSAQTREYYXXXXXXXXXXXXXXXXIRKTAAAVVAEIDDLKAVSNAKVSPETIDYVNG 181
           PGGSAQTR+YY                IRKTAAAVVAEID+LKA+    V P        
Sbjct: 382 PGGSAQTRDYYSDSSSRRRKSLDRSNSIRKTAAAVVAEIDELKAL----VVP-------- 429

Query: 182 GKVLNGDRVLRHSNSNSLRDDCSETFELGFRDNASVIGNTGELKGSKKSRRWS--WNIWG 355
                 DR  R SNSNSLRDDCSETF++GFRDNAS++G  GE KG+KK RRWS  WNIWG
Sbjct: 430 ------DRDFRDSNSNSLRDDCSETFDMGFRDNASLVGGNGERKGAKKPRRWSKAWNIWG 483

Query: 356 LIHPRGGGNKDEEEERYSSRGNGVERSLSESWQELRREGDGEARG 490
            IH R   NK+++++RY SR NGVERS SESW ELR E +G+ RG
Sbjct: 484 FIH-RRSVNKEDDDDRY-SRANGVERSFSESWPELRGERNGDVRG 526


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score =  165 bits (418), Expect = 3e-39
 Identities = 93/166 (56%), Positives = 111/166 (66%), Gaps = 3/166 (1%)
 Frame = +2

Query: 2   PGGSAQTREYYXXXXXXXXXXXXXXXXIRKTAAAVVAEIDDLKAVSNAKVSPETIDYVNG 181
           PGGS QTR+YY                +RKTAAAVVA++DD+K+ SNAKVSP T D+ +G
Sbjct: 416 PGGSEQTRDYYSDSSSRRRRSLDRSSSLRKTAAAVVADMDDIKSSSNAKVSPATADFFSG 475

Query: 182 GKVLNGDRVL-RHSNSNSLRDDCSETFELGFRDNASVIGNTGELKGSKKSRRWS--WNIW 352
            K++  D  L R SNSNSLRDDCSETFE+ FR+        G+ K +KKSRRW   WNIW
Sbjct: 476 PKLVVPDNKLQRDSNSNSLRDDCSETFEIPFRN--------GDRKETKKSRRWGKGWNIW 527

Query: 353 GLIHPRGGGNKDEEEERYSSRGNGVERSLSESWQELRREGDGEARG 490
             I+ R G NK E+E+RYSSR NGV RSLSESW E R E +GE RG
Sbjct: 528 AFIYRRTG-NKYEDEDRYSSRTNGVTRSLSESWPEFRGERNGEVRG 572


>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 655

 Score =  165 bits (418), Expect = 3e-39
 Identities = 93/166 (56%), Positives = 111/166 (66%), Gaps = 3/166 (1%)
 Frame = +2

Query: 2   PGGSAQTREYYXXXXXXXXXXXXXXXXIRKTAAAVVAEIDDLKAVSNAKVSPETIDYVNG 181
           PGGS QTR+YY                +RKTAAAVVA++DD+K+ SNAKVSP T D+ +G
Sbjct: 409 PGGSEQTRDYYSDSSSRRRRSLDRSSSLRKTAAAVVADMDDIKSSSNAKVSPATADFFSG 468

Query: 182 GKVLNGDRVL-RHSNSNSLRDDCSETFELGFRDNASVIGNTGELKGSKKSRRWS--WNIW 352
            K++  D  L R SNSNSLRDDCSETFE+ FR+        G+ K +KKSRRW   WNIW
Sbjct: 469 PKLVVPDNKLQRDSNSNSLRDDCSETFEIPFRN--------GDRKETKKSRRWGKGWNIW 520

Query: 353 GLIHPRGGGNKDEEEERYSSRGNGVERSLSESWQELRREGDGEARG 490
             I+ R G NK E+E+RYSSR NGV RSLSESW E R E +GE RG
Sbjct: 521 AFIYRRTG-NKYEDEDRYSSRTNGVTRSLSESWPEFRGERNGEVRG 565


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