BLASTX nr result

ID: Panax21_contig00027898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027898
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|1...   197   2e-48
ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space...   189   5e-46
ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space...   187   2e-45
ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space...   186   5e-45
ref|XP_002513150.1| Intermembrane space import and assembly prot...   175   1e-41

>ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|118481972|gb|ABK92917.1|
           unknown [Populus trichocarpa]
           gi|222865469|gb|EEF02600.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  197 bits (502), Expect = 2e-48
 Identities = 101/155 (65%), Positives = 120/155 (77%)
 Frame = +3

Query: 144 MGQVQSQDADANSVQFNNRSGQSSAKPVDNSSPPSMESLFAEAAAYGNDYENASLDAKAQ 323
           MGQ QS+ A +++            +P  +SSP SMESL AEA AYGND EN SL+AKAQ
Sbjct: 1   MGQAQSEVAPSDTAD--------QMEPHFSSSP-SMESLLAEAVAYGND-ENESLEAKAQ 50

Query: 324 KALECPCLADLRKGPCGSQFSGAFLCFLKSTAEEKGSDCVHPFVALQSCIKSNPGAFPKD 503
           KALECPC+ADLR GPCG QFS +FLCFLKST+EEKGSDCVHPFVALQ+CIK+NP AF KD
Sbjct: 51  KALECPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFVALQNCIKANPNAFSKD 110

Query: 504 ILEDDRVEKDEKPTQQYKIIPPVWSVESRKPNPKL 608
           ILE+   +K+E+P Q+YKIIPP+WS ES+ P  KL
Sbjct: 111 ILEEAEEKKEEEPAQEYKIIPPIWSRESQSPKSKL 145


>ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  189 bits (481), Expect = 5e-46
 Identities = 96/140 (68%), Positives = 108/140 (77%), Gaps = 8/140 (5%)
 Frame = +3

Query: 213 SAKPVDNSSPPSMESLFAEAAAYGNDYENASLDAKAQKALECPCLADLRKGPCGSQFSGA 392
           SA PV  S PPSMESL AEA AYGN+  N SLDAKA +ALECPC+ADLRKGPCG QFS A
Sbjct: 23  SASPV--SGPPSMESLIAEAEAYGNE-TNESLDAKANRALECPCIADLRKGPCGIQFSDA 79

Query: 393 FLCFLKSTAEEKGSDCVHPFVALQSCIKSNPGAFPKDILEDDRVEKD--------EKPTQ 548
           FLCF KSTAEEKGSDCVHPFVALQSCIK+NP AF KD+L++D  EK+        E+PTQ
Sbjct: 80  FLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDEDEEEKEMEKEKVKTEEPTQ 139

Query: 549 QYKIIPPVWSVESRKPNPKL 608
            Y++IPP WS E + P  KL
Sbjct: 140 DYRVIPPSWSREPQIPKSKL 159


>ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40 [Vitis vinifera] gi|147853097|emb|CAN78563.1|
           hypothetical protein VITISV_010402 [Vitis vinifera]
           gi|297742718|emb|CBI35352.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  187 bits (475), Expect = 2e-45
 Identities = 97/156 (62%), Positives = 121/156 (77%), Gaps = 1/156 (0%)
 Frame = +3

Query: 144 MGQVQSQDADANSVQFNNRSGQSSAKPVDNSSPPSMESLFAEAAAYGNDYENASLDAKAQ 323
           MGQV+S  + A +         S ++P D     S+++L AEAAA+G+D EN SLDAKAQ
Sbjct: 1   MGQVESNQSSAPN--------NSQSRPSD-----SLDALIAEAAAFGDD-ENESLDAKAQ 46

Query: 324 KALECPCLADLRKGPCGSQFSGAFLCFLKSTAEEKGSDCVHPFVALQSCIKSNPGAFPKD 503
           KALECPC+A LR GPCG+QFS AF+CFLKS+AEEKGSDCVHPFVALQ+CIK+NP AF KD
Sbjct: 47  KALECPCIAHLRSGPCGTQFSEAFVCFLKSSAEEKGSDCVHPFVALQNCIKANPNAFSKD 106

Query: 504 IL-EDDRVEKDEKPTQQYKIIPPVWSVESRKPNPKL 608
           IL +DD V+K+E+PTQ+YKIIPP+W+ E + P  KL
Sbjct: 107 ILDDDDEVKKEEEPTQEYKIIPPIWAAE-KGPKQKL 141


>ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  186 bits (472), Expect = 5e-45
 Identities = 94/140 (67%), Positives = 107/140 (76%), Gaps = 8/140 (5%)
 Frame = +3

Query: 213 SAKPVDNSSPPSMESLFAEAAAYGNDYENASLDAKAQKALECPCLADLRKGPCGSQFSGA 392
           SA PV  S PPSMESL AEA AYGN+  N SLDAKA +ALECPC+ADLRKG CG QFS A
Sbjct: 23  SASPV--SGPPSMESLIAEAEAYGNE-TNESLDAKANRALECPCIADLRKGSCGIQFSDA 79

Query: 393 FLCFLKSTAEEKGSDCVHPFVALQSCIKSNPGAFPKDILEDDRVEKD--------EKPTQ 548
           FLCF KSTAEEKGSDCVHPFVALQSCIK+NP AF KD+L++D  EK+        E+PTQ
Sbjct: 80  FLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDVLDEDEEEKEMEKEKVKTEEPTQ 139

Query: 549 QYKIIPPVWSVESRKPNPKL 608
            Y+++PP WS E + P  KL
Sbjct: 140 DYRVVPPSWSREPQIPKSKL 159


>ref|XP_002513150.1| Intermembrane space import and assembly protein 40, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223548161|gb|EEF49653.1| Intermembrane space import
           and assembly protein 40, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 135

 Score =  175 bits (443), Expect = 1e-41
 Identities = 93/145 (64%), Positives = 108/145 (74%)
 Frame = +3

Query: 144 MGQVQSQDADANSVQFNNRSGQSSAKPVDNSSPPSMESLFAEAAAYGNDYENASLDAKAQ 323
           MGQ QS+ A  +  Q N++S  ++          S+ESL AEAAAYGND EN SLDAKAQ
Sbjct: 1   MGQAQSEVAAVDQTQ-NHQSSPAT----------SVESLIAEAAAYGND-ENESLDAKAQ 48

Query: 324 KALECPCLADLRKGPCGSQFSGAFLCFLKSTAEEKGSDCVHPFVALQSCIKSNPGAFPKD 503
           KALECPC+ADLRKG CG QFS AF+CFLKSTAEEKGSDCVHPFVALQ C+K+NP AF  D
Sbjct: 49  KALECPCIADLRKGSCGIQFSEAFVCFLKSTAEEKGSDCVHPFVALQDCLKANPEAFSND 108

Query: 504 ILEDDRVEKDEKPTQQYKIIPPVWS 578
           ILE + VEK+E   + YK+ PP WS
Sbjct: 109 ILEQE-VEKEEVEAKDYKMFPPAWS 132


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