BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027883
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300047.1| peptide deformylase [Populus trichocarpa] gi...   375   e-101
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...   375   e-101
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...   369   e-100
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...   347   4e-93
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan...   329   1e-87

>ref|XP_002300047.1| peptide deformylase [Populus trichocarpa]
           gi|222847305|gb|EEE84852.1| peptide deformylase [Populus
           trichocarpa]
          Length = 258

 Score =  375 bits (964), Expect = e-101
 Identities = 184/225 (81%), Positives = 205/225 (91%)
 Frame = +1

Query: 199 RHPVMAVRAQARRGFSTKEDEVASTADLHFEAPLKIVEYPDPILRAKNKPIETFDDNLKK 378
           R P + VR+QA+RG   K+D+VA+T+DL FEAPLKIVEYPDPILRAKNK I++FDDNLKK
Sbjct: 34  RPPSLFVRSQAKRGPFLKQDQVAATSDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKK 93

Query: 379 LVDEMFYIMYKTDGIGLSAPQVGLNVQLMVFNPVDEHGEGEEIILVNPRVNKYSKKVVRF 558
           LVDEMF +MYKTDGIGLSAPQVG+NVQLMVFNP DEHGEG+EI+LVNPRVNKYSKK V F
Sbjct: 94  LVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLF 153

Query: 559 NEGCLSFPGIYADVKRPESVKIDARDINGARFTLSLSGLPARVFQHEFDHLQGVLFFDRM 738
           NEGCLSFPGIYADVKRPESVKIDARDINGARFT++LSGLPARVFQHEFDHLQG+LFFDRM
Sbjct: 154 NEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRM 213

Query: 739 TEEVLDSIRTELQALENKYEDQTGQPSPEKVETLKGKRVPTGFGK 873
           TEEVLDSIR  LQALE KYED+TG PSPE++ET + K+V  GFGK
Sbjct: 214 TEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLKKVAAGFGK 258


>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
           gi|296087647|emb|CBI34903.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  375 bits (962), Expect = e-101
 Identities = 185/230 (80%), Positives = 203/230 (88%)
 Frame = +1

Query: 187 STRFRHPVMAVRAQARRGFSTKEDEVASTADLHFEAPLKIVEYPDPILRAKNKPIETFDD 366
           + RFR P+M V+ QA+RGFS KE+ +AS ADL FEAPLKIVEYPDPILRAKNK I TFDD
Sbjct: 46  ANRFRLPLMQVQVQAKRGFSFKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDD 105

Query: 367 NLKKLVDEMFYIMYKTDGIGLSAPQVGLNVQLMVFNPVDEHGEGEEIILVNPRVNKYSKK 546
           NLKKLVDEMF +MYKTDGIGLSAPQVG+NVQLMVFNPV E GEGEEI+LVNPRVNKYSKK
Sbjct: 106 NLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKK 165

Query: 547 VVRFNEGCLSFPGIYADVKRPESVKIDARDINGARFTLSLSGLPARVFQHEFDHLQGVLF 726
           +V FNEGCLSFPGIYADV+RPESVKIDARDI GARF ++LSGLPARVFQHEFDHLQG LF
Sbjct: 166 IVLFNEGCLSFPGIYADVERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLF 225

Query: 727 FDRMTEEVLDSIRTELQALENKYEDQTGQPSPEKVETLKGKRVPTGFGKS 876
           FDRMTEEVLDSI   LQ LE KYED+TG PSPE++ET K ++V  GFGKS
Sbjct: 226 FDRMTEEVLDSIHANLQDLERKYEDRTGFPSPERIETRKRRKVAAGFGKS 275


>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223539350|gb|EEF40941.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 282

 Score =  369 bits (947), Expect = e-100
 Identities = 180/231 (77%), Positives = 205/231 (88%)
 Frame = +1

Query: 184 FSTRFRHPVMAVRAQARRGFSTKEDEVASTADLHFEAPLKIVEYPDPILRAKNKPIETFD 363
           FS+  + P + VRAQA+R FS KE+E+A+ ADL FE PLKIVEYPDPILR KNK I+TFD
Sbjct: 52  FSSIAKPPSIPVRAQAKRSFSFKEEEIATPADLCFEEPLKIVEYPDPILRRKNKRIDTFD 111

Query: 364 DNLKKLVDEMFYIMYKTDGIGLSAPQVGLNVQLMVFNPVDEHGEGEEIILVNPRVNKYSK 543
           DNLKKLVDEMF +MYKTDGIGLSAPQVG+NVQLMVFNPV E GEGEEI+L+NPR+NKYSK
Sbjct: 112 DNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLINPRLNKYSK 171

Query: 544 KVVRFNEGCLSFPGIYADVKRPESVKIDARDINGARFTLSLSGLPARVFQHEFDHLQGVL 723
           K+V FNEGCLSFPGIYADV RPESVKIDARDINGARFT++LSGLPARVFQHE+DHL+G+L
Sbjct: 172 KIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFTVNLSGLPARVFQHEYDHLEGIL 231

Query: 724 FFDRMTEEVLDSIRTELQALENKYEDQTGQPSPEKVETLKGKRVPTGFGKS 876
           FFDRMT+EVLDSIR +LQALE K+ED+TG  SPEK+ET K K+   GFGKS
Sbjct: 232 FFDRMTDEVLDSIRAQLQALEKKFEDKTGYASPEKIETRKTKKAAAGFGKS 282


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score =  347 bits (890), Expect = 4e-93
 Identities = 172/230 (74%), Positives = 199/230 (86%)
 Frame = +1

Query: 187 STRFRHPVMAVRAQARRGFSTKEDEVASTADLHFEAPLKIVEYPDPILRAKNKPIETFDD 366
           S++F+ P   V AQA+RGFS KED+VAS+ DL FEAPLKIVEYPDPILRAKNK I +FDD
Sbjct: 45  SSKFKAPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSFDD 104

Query: 367 NLKKLVDEMFYIMYKTDGIGLSAPQVGLNVQLMVFNPVDEHGEGEEIILVNPRVNKYSKK 546
           NLKKLV EMF +MYKTDGIGLSAPQVG+NVQLMVFN V E GEGEEI+LVNP+V +YSKK
Sbjct: 105 NLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYSKK 164

Query: 547 VVRFNEGCLSFPGIYADVKRPESVKIDARDINGARFTLSLSGLPARVFQHEFDHLQGVLF 726
            V FNEGCLSFP IYADV+RPES+KIDARDI+G RF ++LSGL ARVFQHEFDHLQG LF
Sbjct: 165 TVLFNEGCLSFPMIYADVERPESIKIDARDISGTRFMVNLSGLSARVFQHEFDHLQGTLF 224

Query: 727 FDRMTEEVLDSIRTELQALENKYEDQTGQPSPEKVETLKGKRVPTGFGKS 876
           FDRMT+EVL++IR +LQALE KYED+TG PSPE++E  + ++V  GFGKS
Sbjct: 225 FDRMTDEVLETIRPQLQALEKKYEDRTGLPSPERIENFR-RKVGAGFGKS 273


>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
           gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
           Full=Peptide deformylase 1B, chloroplastic; Short=PDF
           1B; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320950|gb|AAG33972.1| peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 279

 Score =  329 bits (843), Expect = 1e-87
 Identities = 166/240 (69%), Positives = 195/240 (81%), Gaps = 2/240 (0%)
 Frame = +1

Query: 163 SITTLPYFSTRFRHPVMAVRAQARRGFS--TKEDEVASTADLHFEAPLKIVEYPDPILRA 336
           S   L + ++  + P +AV AQARR  S  TK DE+A+ ADL F  PLKIVEYPDPILRA
Sbjct: 40  SANCLFFSASSNKPPKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRA 99

Query: 337 KNKPIETFDDNLKKLVDEMFYIMYKTDGIGLSAPQVGLNVQLMVFNPVDEHGEGEEIILV 516
           KNK I+ FD NLKKLVDEMF IMYKTDGIGLSAPQVG+NVQLMVFN   E GEGEEI+LV
Sbjct: 100 KNKRIDNFDANLKKLVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLV 159

Query: 517 NPRVNKYSKKVVRFNEGCLSFPGIYADVKRPESVKIDARDINGARFTLSLSGLPARVFQH 696
           NPRV++YS++++ + EGCLSFP I+ DVKRPESVK+DA+DING RF +SLS LPARVFQH
Sbjct: 160 NPRVSRYSRRIIPYEEGCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQH 219

Query: 697 EFDHLQGVLFFDRMTEEVLDSIRTELQALENKYEDQTGQPSPEKVETLKGKRVPTGFGKS 876
           EFDHLQGVLFFD+MT+EVLD+IR +L ALE KYED+TG P+PE + T K K+   GFGKS
Sbjct: 220 EFDHLQGVLFFDKMTDEVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGKS 279