BLASTX nr result

ID: Panax21_contig00027874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027874
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316037.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_002329350.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002509542.1| conserved hypothetical protein [Ricinus comm...    83   2e-14
ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_002298611.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_002316037.1| predicted protein [Populus trichocarpa] gi|222865077|gb|EEF02208.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 49/131 (37%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
 Frame = +3

Query: 9   TESLLNINFAKGLLRIPPLKIQNHTEMLLRNFMAMEHCYHNCLKAVTSYVFLLGCLIRTE 188
           T++LL+I F  G+L IP + I  +TE L +N +A+EHC  + ++ +TSYVFL+  LI ++
Sbjct: 242 TKNLLDIKFVSGVLEIPNVLIHQYTESLFKNLIALEHCSGDSVQHITSYVFLMKSLIGSD 301

Query: 189 KDARLLCKRQILTGSN-KEEEITVLFKNMHVEIDADEFYYRGLCNQIHKFRKPGKQVW-- 359
           +D +LL K+ ILT  +  E+E+  LF+    E++ +E YY GL  Q+ K  K  ++ W  
Sbjct: 302 EDVKLLKKKDILTNYDVNEKEVAKLFEKSCEEVNLNESYYDGLFEQV-KGHKSTRKTWHL 360

Query: 360 -CQKIKQKYHK 389
             ++ K+ Y +
Sbjct: 361 RSEEFKRSYRR 371


>ref|XP_002329350.1| predicted protein [Populus trichocarpa] gi|222870400|gb|EEF07531.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 6   TTESLLNINFAKGLLRIPPLKIQNHTEMLLRNFMAMEHCYHNCLKAVTSYVFLLGCLIRT 185
           TT+  L+++F  G+ +IPPL+I + T+ L RN +A E    +C + +TSY   +  L+ T
Sbjct: 114 TTQHQLDLSFENGVFKIPPLQIHDSTDSLFRNLIAFEQSMPDCGQYMTSYALFMDRLVDT 173

Query: 186 EKDARLLCKRQILTGS-NKEEEITVLFKNMHVEIDADEFYYRGLCNQIHKFRKPGKQVWC 362
             D  LL K++I+       E++T LF N+  ++   EFY+  LC Q+  +       + 
Sbjct: 174 SSDVELLAKKRIIQNDLGGYEDVTDLFNNICKQVVVREFYFTQLCEQVDAYYNKSWHGYK 233

Query: 363 QKIKQKYHKLIWEL 404
             +KQ Y K  W +
Sbjct: 234 ASLKQDYFKNPWAI 247


>ref|XP_002509542.1| conserved hypothetical protein [Ricinus communis]
           gi|223549441|gb|EEF50929.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/129 (34%), Positives = 62/129 (48%)
 Frame = +3

Query: 12  ESLLNINFAKGLLRIPPLKIQNHTEMLLRNFMAMEHCYHNCLKAVTSYVFLLGCLIRTEK 191
           +S+L+I F KG+L IP L IQ  TE + RN ++ E C       VT Y  LL  LI T K
Sbjct: 279 KSILDIRFDKGILEIPNLLIQETTETIFRNLISFEQCSREYPPIVTCYAILLDNLINTVK 338

Query: 192 DARLLCKRQILTGSNKEEEITVLFKNMHVEIDADEFYYRGLCNQIHKFRKPGKQVWCQKI 371
           D  +LC   I+      E+ T  F  ++++     FYY  LC +++ +RK     W    
Sbjct: 339 DVNILCSSDIIDNWLNPEDATQFFNKLYLDAYVKIFYYLNLCKEVNAYRKRRWPRWRAAY 398

Query: 372 KQKYHKLIW 398
              Y    W
Sbjct: 399 MHNYFGTPW 407


>ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|222870405|gb|EEF07536.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 6   TTESLLNINFAKGLLRIPPLKIQNHTEMLLRNFMAMEHCYHNCLKAVTSYVFLLGCLIRT 185
           TT+  L++ F  G+ +IPPL+I + T+ L RN +A E     C + +TSY  L+  L+ T
Sbjct: 273 TTKHQLDLCFENGVFKIPPLQIHDSTDSLFRNLIAFEQSVQGCRQYMTSYALLMDRLVDT 332

Query: 186 EKDARLLCKRQILTGS-NKEEEITVLFKNMHVEIDADEFYYRGLCNQIHKFRKPGKQVWC 362
             D  LL K++I+       E++T LF N+  ++   EF +  LC Q+  +       + 
Sbjct: 333 SSDVELLAKKRIIQNDLGGYEDVTDLFNNICKQVVVREFNFTQLCEQVDAYYNKSWHGYK 392

Query: 363 QKIKQKYHKLIWEL 404
             +KQ Y K  W +
Sbjct: 393 ASLKQDYFKNPWTI 406


>ref|XP_002298611.1| predicted protein [Populus trichocarpa] gi|222845869|gb|EEE83416.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/136 (30%), Positives = 67/136 (49%)
 Frame = +3

Query: 9   TESLLNINFAKGLLRIPPLKIQNHTEMLLRNFMAMEHCYHNCLKAVTSYVFLLGCLIRTE 188
           + S+L+I F  G+L IPPL IQ  TE+++RN ++ E C   C   +TSY  LL  LI T 
Sbjct: 282 SRSILDIKFENGVLEIPPLLIQETTEVIIRNLISYEQCSPKCTDRITSYAVLLDNLINTT 341

Query: 189 KDARLLCKRQILTGSNKEEEITVLFKNMHVEIDADEFYYRGLCNQIHKFRKPGKQVWCQK 368
           KD        I+      +E T  F  ++ +    ++YY  LC +++++ +     W   
Sbjct: 342 KDMDAFTSSGIIDNWLNPDEATQFFNKLYQDAYLKKYYYLQLCQEMNRYHQRRFPRWRAL 401

Query: 369 IKQKYHKLIWEL*ASF 416
           +   Y    W + + F
Sbjct: 402 LMSNYFGTPWAIVSIF 417


Top