BLASTX nr result

ID: Panax21_contig00027872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027872
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27889.3| unnamed protein product [Vitis vinifera]              117   8e-25
ref|XP_003529723.1| PREDICTED: uncharacterized protein LOC100783...   110   1e-22
ref|XP_002327447.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_004146810.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...   104   7e-21
emb|CBI35909.3| unnamed protein product [Vitis vinifera]              104   9e-21

>emb|CBI27889.3| unnamed protein product [Vitis vinifera]
          Length = 88

 Score =  117 bits (294), Expect = 8e-25
 Identities = 50/80 (62%), Positives = 60/80 (75%)
 Frame = -2

Query: 256 PKQGVERMGGKVNRGQEEAMEYKGMSRLGSRPPNCEHRCGHCRPCIAIQVPTTADHLGLL 77
           PK G+ER G   N    +   Y+G+S LGSRPPNC H+C  C PC A+Q+PTT DH+G+ 
Sbjct: 12  PKAGLERRGTPRNG---DGAAYRGLSTLGSRPPNCNHKCQGCIPCDAVQIPTTTDHIGVQ 68

Query: 76  YANYEPEGWKCKCGSTFFNP 17
           YANYEPEGWKCKCGS+FFNP
Sbjct: 69  YANYEPEGWKCKCGSSFFNP 88


>ref|XP_003529723.1| PREDICTED: uncharacterized protein LOC100783024 [Glycine max]
          Length = 123

 Score =  110 bits (276), Expect = 1e-22
 Identities = 61/131 (46%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
 Frame = -2

Query: 397 RIYCFLISTLYILSWVSTVALPFAPFDHTAHQQVKSQILKSPQVAFV-PKQGVERMGGKV 221
           R++CFL++ L I+S VS V  PF P         K + L+SP    + PK+G+  + G  
Sbjct: 4   RLFCFLLA-LQIVSLVSAVRKPFLP--------AKEEALQSPPPHTIEPKKGLMGIEG-T 53

Query: 220 NRGQEEAMEYKGMSRLGSRPPNCEHRCGHCRPCIAIQVPTTA---DHLGLLYANYEPEGW 50
           +   +EA E  G+S++GS PP+CEH+C  C PC AIQVP+T+    HLG+ YANYEPE W
Sbjct: 54  SETMKEAYE-GGVSKIGSSPPSCEHKCYGCVPCEAIQVPSTSTRRSHLGIQYANYEPESW 112

Query: 49  KCKCGSTFFNP 17
           KCKCG +F++P
Sbjct: 113 KCKCGLSFYSP 123


>ref|XP_002327447.1| predicted protein [Populus trichocarpa] gi|222836001|gb|EEE74422.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  106 bits (265), Expect = 2e-21
 Identities = 65/146 (44%), Positives = 84/146 (57%), Gaps = 16/146 (10%)
 Frame = -2

Query: 406 MKRRIYCFLISTLYILSWVSTVALPFAPFDHTA-HQQVKSQILKSPQVA----FVPKQGV 242
           M+    C L+  L I+S VS  + PFAP    A ++ V    L+S QV     F P+ G 
Sbjct: 1   MEASSICCLVLALQIVSLVSAASRPFAPNSGVAVNRAVTGHSLQSLQVPLDSNFDPQSGS 60

Query: 241 ERMGGKVNRGQ------EEAMEY-KGMSRLGSRPPNCEHRCGHCRPCIAIQVP----TTA 95
           E+ G K   G       E A  Y KG++++GS PP+CEH+C  C PC AIQVP    T  
Sbjct: 61  EK-GIKTKDGVAGGMIIEAAAGYAKGITKIGSTPPSCEHKCHGCTPCEAIQVPAISKTGT 119

Query: 94  DHLGLLYANYEPEGWKCKCGSTFFNP 17
            HL + YANYEPEGWKCKCG +F++P
Sbjct: 120 HHLSVNYANYEPEGWKCKCGPSFYSP 145


>ref|XP_004146810.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3-like [Cucumis
           sativus] gi|449476626|ref|XP_004154789.1| PREDICTED:
           EPIDERMAL PATTERNING FACTOR-like protein 3-like [Cucumis
           sativus]
          Length = 116

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/133 (42%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
 Frame = -2

Query: 406 MKRRIYCFLISTLYILSWVSTVALPFAPFDHTAHQQVKSQILKSPQVAFVPKQGVERMGG 227
           MK   +CF+   L ++ WVS  A  FAP               +P +    +QG+     
Sbjct: 1   MKGTYWCFIF-ILQLVCWVSAAARNFAP---------------NPALPPHKQQGLIDSKQ 44

Query: 226 KVNRGQEEAMEYKGMSRLGSRPPNCEHRCGHCRPCIAIQVPTTAD---HLGLLYANYEPE 56
            V +G +E   Y+GM ++GS PP+CEH+C  C PC AIQVPTT +   H+G+ Y NYEPE
Sbjct: 45  AV-KGVKEEEFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPE 103

Query: 55  GWKCKCGSTFFNP 17
           GWKCKCG +F++P
Sbjct: 104 GWKCKCGPSFYSP 116


>emb|CBI35909.3| unnamed protein product [Vitis vinifera]
          Length = 65

 Score =  104 bits (259), Expect = 9e-21
 Identities = 41/59 (69%), Positives = 51/59 (86%)
 Frame = -2

Query: 193 YKGMSRLGSRPPNCEHRCGHCRPCIAIQVPTTADHLGLLYANYEPEGWKCKCGSTFFNP 17
           YKG S++GSRPP+CE++C  C PC AIQVPTT +HLG+ YANYEPEGWKCKCG +F++P
Sbjct: 7   YKGQSKIGSRPPSCENKCYGCTPCEAIQVPTTTNHLGVQYANYEPEGWKCKCGPSFYSP 65


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