BLASTX nr result

ID: Panax21_contig00027812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027812
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    70   2e-10
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]             69   5e-10
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            68   9e-10
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]    67   2e-09
emb|CAN72857.1| hypothetical protein VITISV_029892 [Vitis vinifera]    65   6e-09

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/48 (66%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
 Frame = -3

Query: 529  VLEDYTEADMACS-EEKKSTSGYLFTFAGGAVLWQSKLQKCIALSTTE 389
            +L+ YT+ADMA   + +KS++GYLFTF+GGA+ WQSKLQKC+ALSTTE
Sbjct: 1174 ILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTE 1221


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 33/49 (67%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = -3

Query: 529 VLEDYTEADMACS-EEKKSTSGYLFTFAGGAVLWQSKLQKCIALSTTEL 386
           +LE +T+ADMA   + +KSTSGYLF FA GA+ WQSKLQKC+ALSTTE+
Sbjct: 534 ILEGFTDADMAGDLDNRKSTSGYLFKFARGAISWQSKLQKCVALSTTEV 582


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = -3

Query: 529  VLEDYTEADMACS-EEKKSTSGYLFTFAGGAVLWQSKLQKCIALSTTE 389
            VL  YT+ADMA   + +KSTSGYL  F+GGAV WQSKLQKC+ALSTTE
Sbjct: 1175 VLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTE 1222


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/48 (66%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
 Frame = -3

Query: 529  VLEDYTEADMACS-EEKKSTSGYLFTFAGGAVLWQSKLQKCIALSTTE 389
            +L  YT++DMA   + +KSTSGYL TF+GGAV WQS+LQKC+ALSTTE
Sbjct: 1145 ILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTE 1192


>emb|CAN72857.1| hypothetical protein VITISV_029892 [Vitis vinifera]
          Length = 259

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 31/49 (63%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
 Frame = -3

Query: 529 VLEDYTEADMACS-EEKKSTSGYLFTFAGGAVLWQSKLQKCIALSTTEL 386
           +LE Y +ADM  + + +KSTSG+L TF GGAV WQSKLQKC+ALSTT++
Sbjct: 127 ILEGYLDADMVGNLDSRKSTSGFLMTFIGGAVSWQSKLQKCVALSTTKV 175


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