BLASTX nr result

ID: Panax21_contig00027809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027809
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002280019.1| PREDICTED: uncharacterized protein LOC100262...    60   2e-07
emb|CBI37643.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN62018.1| hypothetical protein VITISV_008855 [Vitis vinifera]    60   2e-07
ref|NP_001190926.1| transducin/WD40 domain-containing protein [A...    57   2e-06

>ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|222856664|gb|EEE94211.1|
           predicted protein [Populus trichocarpa]
          Length = 890

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +2

Query: 5   LAQNKLSENIRKLQGISMKTTEMQDTAISFSSMAKEVLR 121
           +AQNKL ENIRKLQGI+++ TEMQ+TA SFS+MAKEVLR
Sbjct: 843 IAQNKLHENIRKLQGINLRATEMQETASSFSAMAKEVLR 881


>ref|XP_002280019.1| PREDICTED: uncharacterized protein LOC100262676 [Vitis vinifera]
          Length = 1053

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/40 (70%), Positives = 38/40 (95%)
 Frame = +2

Query: 5    LAQNKLSENIRKLQGISMKTTEMQDTAISFSSMAKEVLRS 124
            +A++KL+EN++KLQGI++KTTEMQDTA SFS MAK+VLR+
Sbjct: 1007 MAESKLNENLKKLQGINIKTTEMQDTAKSFSFMAKQVLRA 1046


>emb|CBI37643.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/40 (70%), Positives = 38/40 (95%)
 Frame = +2

Query: 5    LAQNKLSENIRKLQGISMKTTEMQDTAISFSSMAKEVLRS 124
            +A++KL+EN++KLQGI++KTTEMQDTA SFS MAK+VLR+
Sbjct: 1008 MAESKLNENLKKLQGINIKTTEMQDTAKSFSFMAKQVLRA 1047


>emb|CAN62018.1| hypothetical protein VITISV_008855 [Vitis vinifera]
          Length = 137

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/40 (70%), Positives = 38/40 (95%)
 Frame = +2

Query: 5   LAQNKLSENIRKLQGISMKTTEMQDTAISFSSMAKEVLRS 124
           +A++KL+EN++KLQGI++KTTEMQDTA SFS MAK+VLR+
Sbjct: 91  MAESKLNENLKKLQGINIKTTEMQDTAKSFSFMAKQVLRA 130


>ref|NP_001190926.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|332661131|gb|AEE86531.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 1050

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/40 (65%), Positives = 36/40 (90%)
 Frame = +2

Query: 5    LAQNKLSENIRKLQGISMKTTEMQDTAISFSSMAKEVLRS 124
            +AQ+KL +N++KLQGIS++TTEM+DTA SFSS AKE+L +
Sbjct: 1001 MAQSKLQDNLKKLQGISLRTTEMEDTAKSFSSTAKELLNA 1040


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