BLASTX nr result

ID: Panax21_contig00027783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027783
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69961.1| hypothetical protein VITISV_008739 [Vitis vinifera]   187   1e-45
ref|XP_002509547.1| leucine-rich repeat protein, putative [Ricin...   171   7e-41
ref|XP_003525761.1| PREDICTED: probable inactive leucine-rich re...   166   2e-39
ref|XP_002279697.1| PREDICTED: probable inactive leucine-rich re...   163   2e-38
ref|XP_003622214.1| Receptor protein kinase-like protein [Medica...   162   2e-38

>emb|CAN69961.1| hypothetical protein VITISV_008739 [Vitis vinifera]
          Length = 773

 Score =  187 bits (474), Expect = 1e-45
 Identities = 96/140 (68%), Positives = 112/140 (80%), Gaps = 3/140 (2%)
 Frame = +2

Query: 2   LTTVLLSKNSFSGMIPEQFGKLNQLQHLDLSFNLLRGVPPAALFSLPNITYINLASNMLS 181
           L T LLS+NSFSG IP Q G+L QLQHLDLSFN L G PP+ALFS+ NI+Y+NLASNMLS
Sbjct: 258 LVTALLSENSFSGEIPAQLGELAQLQHLDLSFNSLTGTPPSALFSMANISYLNLASNMLS 317

Query: 182 GSLPDQLSCGDELGYVDVSSNRLTGNLPSCLASTSDKRIGIFGGNCLS--TQNQHPESYC 355
           GSLPD LSCGDELG+VD+SSN+L G LPSCL+  SD+R+  FGGNC S   Q+QH ESYC
Sbjct: 318 GSLPDGLSCGDELGFVDISSNKLMGVLPSCLSIASDRRVVKFGGNCFSIDAQHQHQESYC 377

Query: 356 K-AYLGKKQSNRKTIGVLIG 412
           K A++  KQS  K IGVL+G
Sbjct: 378 KAAHIKGKQSKGKEIGVLLG 397


>ref|XP_002509547.1| leucine-rich repeat protein, putative [Ricinus communis]
           gi|223549446|gb|EEF50934.1| leucine-rich repeat protein,
           putative [Ricinus communis]
          Length = 769

 Score =  171 bits (432), Expect = 7e-41
 Identities = 88/141 (62%), Positives = 104/141 (73%), Gaps = 3/141 (2%)
 Frame = +2

Query: 2   LTTVLLSKNSFSGMIPEQFGKLNQLQHLDLSFNLLRGVPPAALFSLPNITYINLASNMLS 181
           L T+LLS NSFSG I  QF +L+QLQHLDLS N L G PP++LFSLPNI Y+NLASNMLS
Sbjct: 258 LITILLSNNSFSGKIRAQFDQLSQLQHLDLSLNRLSGTPPSSLFSLPNIRYLNLASNMLS 317

Query: 182 GSLPDQLSCGDELGYVDVSSNRLTGNLPSCLASTSDKRIGIFGGNCLST--QNQHPESYC 355
           GSLPD LSCG  LG+VD+S+N+  G LPSCL S S+KR   FGGNCLS   Q QH E YC
Sbjct: 318 GSLPDHLSCGSNLGFVDISTNKFIGGLPSCLGSMSNKRAIKFGGNCLSINGQYQHQEPYC 377

Query: 356 -KAYLGKKQSNRKTIGVLIGV 415
            +A +  KQS  + +G L+ V
Sbjct: 378 EEANIEAKQSRGRAVGTLVAV 398


>ref|XP_003525761.1| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At3g03770-like [Glycine max]
          Length = 764

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/121 (66%), Positives = 100/121 (82%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   LTTVLLSKNSFSGMIPEQFGKLNQLQHLDLSFNLLRGVPPAALFSLPNITYINLASNMLS 181
           + TVLLS NSFSG +P+QFG+L+QLQHLDLS N L   PP+ LFSLP I+Y+NLASN LS
Sbjct: 258 VVTVLLSNNSFSGEVPKQFGELDQLQHLDLSSNHLSKTPPSTLFSLPKISYLNLASNALS 317

Query: 182 GSLPDQLSCGDELGYVDVSSNRLTGNLPSCLASTSDKRIGIFGGNCLS--TQNQHPESYC 355
           G+LPD+LSCG +LG+VD+SSN+L+G LPSCLA+TSD R+  + GNCLS  +QNQH  SYC
Sbjct: 318 GALPDKLSCGSKLGFVDISSNKLSGGLPSCLANTSDGRVVRYAGNCLSVDSQNQHRGSYC 377

Query: 356 K 358
           +
Sbjct: 378 R 378


>ref|XP_002279697.1| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At3g03770-like [Vitis vinifera]
          Length = 770

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 3/136 (2%)
 Frame = +2

Query: 17  LSKNSFSGMIPEQFGKLNQLQHLDLSFNLLRGVPPAALFSLPNITYINLASNMLSGSLPD 196
           LS NSF G IP+Q+ +L QLQHLDLSFN L G PP ALFSLPNI+Y+NLASN LSGSL +
Sbjct: 263 LSNNSFMGEIPQQYSRLVQLQHLDLSFNFLTGTPPEALFSLPNISYLNLASNTLSGSLSN 322

Query: 197 QLSCGDELGYVDVSSNRLTGNLPSCLASTSDKRIGIFGGNCLST--QNQHPESYCKAY-L 367
            + C  EL +VD+S+N+LTG LPSCL++  DKR+    GNCLS   Q+QHP+SYC A  +
Sbjct: 323 HIHCSSELSFVDISNNKLTGGLPSCLSTALDKRVVNSDGNCLSIGFQHQHPDSYCMAVPV 382

Query: 368 GKKQSNRKTIGVLIGV 415
            KK+S  K +G+L+ V
Sbjct: 383 KKKESRSKDMGILVAV 398


>ref|XP_003622214.1| Receptor protein kinase-like protein [Medicago truncatula]
           gi|355497229|gb|AES78432.1| Receptor protein kinase-like
           protein [Medicago truncatula]
          Length = 768

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/122 (65%), Positives = 99/122 (81%), Gaps = 3/122 (2%)
 Frame = +2

Query: 2   LTTVLLSKNSFSGMIPEQFGKLNQLQHLDLSFNLLRGVPPAALFSLPNITYINLASNMLS 181
           + TVLLSKNSFSG IP +FG+LNQLQHLDLS N L GVPP++LFSL NI+Y+NLA N+LS
Sbjct: 260 VVTVLLSKNSFSGEIPVKFGELNQLQHLDLSSNRLSGVPPSSLFSLTNISYLNLAKNVLS 319

Query: 182 GSLPDQLSCGDELGYVDVSSNRLTGNLPSCLASTSDKRIGIFGGNCLSTQNQHPE---SY 352
           GS+P +L CG +LG+VD+SSN L+G LP+CL STSD+R+  FGGNCLS  +Q  +   SY
Sbjct: 320 GSIPQKLKCGSKLGFVDISSNMLSGLLPTCLESTSDRRVVRFGGNCLSVNSQAHQKHGSY 379

Query: 353 CK 358
           CK
Sbjct: 380 CK 381


Top