BLASTX nr result
ID: Panax21_contig00027758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00027758
(1468 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23126.3| unnamed protein product [Vitis vinifera] 285 3e-74
ref|XP_003634167.1| PREDICTED: golgin candidate 5-like isoform 2... 279 2e-72
ref|XP_002267350.1| PREDICTED: golgin candidate 5-like isoform 1... 279 2e-72
ref|XP_002303293.1| predicted protein [Populus trichocarpa] gi|2... 264 4e-68
gb|ABD32289.1| tRNA-binding arm; t-snare [Medicago truncatula] 244 3e-62
>emb|CBI23126.3| unnamed protein product [Vitis vinifera]
Length = 931
Score = 285 bits (728), Expect = 3e-74
Identities = 192/437 (43%), Positives = 241/437 (55%), Gaps = 23/437 (5%)
Frame = +1
Query: 223 MSWFSGKVSLGNFPDFSEAVNKFSECVKNIEKNFDNALGFXXXXXXXXXXXXGLWPSSTD 402
M+WFSGKVSLG FPD + AVNK SE VKNIEKNFD+ALGF GLWPS+
Sbjct: 1 MAWFSGKVSLGGFPDLAGAVNKLSESVKNIEKNFDSALGFEEKSDPGGEVSSGLWPSA-- 58
Query: 403 RKLLADPVMAIMGHKNEESIDRXXXXXXXXXXXXXXXXXXXVKPDSSAVPAIEQASIGED 582
+A MG K E+ ++ S+ PA E A E
Sbjct: 59 --------IAFMGQKGSEAGEKQEVETVG----------------STHSPAEEAAPAKEG 94
Query: 583 VHEETIRLD-VHPD-PVEGTNIAIASAEETKIIASEFAEADSKSVLIELSELNTEHVKES 756
I D VHP EGT+I IA + + E+DS+ VL SE E V+
Sbjct: 95 REPVQIEKDHVHPGISEEGTDIVIADSRKN--------ESDSQLVLAAPSESTVESVESM 146
Query: 757 VPSNYLQQKDITETVSFENSGLLEAKPSSHVDEAESTISVPHELQNVIDRAEIADEQKTR 936
SNY+QQ+ + +V + + +D+ E +I +P E V D E EQKT
Sbjct: 147 DSSNYIQQEASSHSVEANSQ-------ADEIDQVEGSIIIPDESHKVADLHESTGEQKTG 199
Query: 937 EEETVEIVSPMQAEEASFNSQIGSGTEPPGSNSPTSDE--------------------AS 1056
E V+ + P+Q E AS +S+ G GTE S+S T E AS
Sbjct: 200 VNEIVDKILPIQTE-ASIDSKAGIGTELSASHSATIKETESAGELSEDHLPTTLPSYVAS 258
Query: 1057 EVVPETISQEGDAITRTFEGNQHGSDHETNVTEN-LSLGNTSSNTLDSRVELEKVKKDMQ 1233
E V E +S E D I + + H D+ T+V E+ G S+++DS VE+EK+K +M+
Sbjct: 259 ETVSELVSHENDVIAKAVDPQAH--DYNTDVKESAFGSGTNVSDSVDSAVEVEKLKLEMK 316
Query: 1234 MMETALLGAARQAQAKADEIAKLMNENEQLKAMIEDARRKSNEAEIETLREEYHQRVSVL 1413
M+ETAL GAARQAQAKADEIAKLMNENEQLK + ED +RKSNEAE E+LREEYHQRV+ L
Sbjct: 317 MLETALQGAARQAQAKADEIAKLMNENEQLKIVNEDLKRKSNEAETESLREEYHQRVAAL 376
Query: 1414 ERKVYALTKERDTLRRE 1464
ERKVYALTKERDTLRRE
Sbjct: 377 ERKVYALTKERDTLRRE 393
>ref|XP_003634167.1| PREDICTED: golgin candidate 5-like isoform 2 [Vitis vinifera]
Length = 988
Score = 279 bits (713), Expect = 2e-72
Identities = 194/468 (41%), Positives = 245/468 (52%), Gaps = 54/468 (11%)
Frame = +1
Query: 223 MSWFSGKVSLGNFPDFSEAVNKFSECVKNIEKNFDNALGFXXXXXXXXXXXXGLWPSSTD 402
M+WFSGKVSLG FPD + AVNK SE VKNIEKNFD+ALGF GLWPS+
Sbjct: 1 MAWFSGKVSLGGFPDLAGAVNKLSESVKNIEKNFDSALGFEEKSDPGGEVSSGLWPSA-- 58
Query: 403 RKLLADPVMAIMGHKNEESI-------DRXXXXXXXXXXXXXXXXXXXVKPDSSAVPAIE 561
+A MG K E + +P+SS P
Sbjct: 59 --------IAFMGQKGSEGTTESSEQPESSEQPESSERPESSERPESSEQPESSEQPESS 110
Query: 562 Q--ASIGEDVHEETI-----------------------RLDVHPD-PVEGTNIAIASAEE 663
Q +S GE ET+ + VHP EGT+I IA + +
Sbjct: 111 QLPSSAGEKQEVETVGSTHSPAEEAAPAKEGREPVQIEKDHVHPGISEEGTDIVIADSRK 170
Query: 664 TKIIASEFAEADSKSVLIELSELNTEHVKESVPSNYLQQKDITETVSFENSGLLEAKPSS 843
E+DS+ VL SE E V+ SNY+QQ+ + +V + +
Sbjct: 171 N--------ESDSQLVLAAPSESTVESVESMDSSNYIQQEASSHSVEANSQ-------AD 215
Query: 844 HVDEAESTISVPHELQNVIDRAEIADEQKTREEETVEIVSPMQAEEASFNSQIGSGTEPP 1023
+D+ E +I +P E V D E EQKT E V+ + P+Q EAS +S+ G GTE
Sbjct: 216 EIDQVEGSIIIPDESHKVADLHESTGEQKTGVNEIVDKILPIQT-EASIDSKAGIGTELS 274
Query: 1024 GSNSPTSDE--------------------ASEVVPETISQEGDAITRTFEGNQHGSDHET 1143
S+S T E ASE V E +S E D I + + H D+ T
Sbjct: 275 ASHSATIKETESAGELSEDHLPTTLPSYVASETVSELVSHENDVIAKAVDPQAH--DYNT 332
Query: 1144 NVTEN-LSLGNTSSNTLDSRVELEKVKKDMQMMETALLGAARQAQAKADEIAKLMNENEQ 1320
+V E+ G S+++DS VE+EK+K +M+M+ETAL GAARQAQAKADEIAKLMNENEQ
Sbjct: 333 DVKESAFGSGTNVSDSVDSAVEVEKLKLEMKMLETALQGAARQAQAKADEIAKLMNENEQ 392
Query: 1321 LKAMIEDARRKSNEAEIETLREEYHQRVSVLERKVYALTKERDTLRRE 1464
LK + ED +RKSNEAE E+LREEYHQRV+ LERKVYALTKERDTLRRE
Sbjct: 393 LKIVNEDLKRKSNEAETESLREEYHQRVAALERKVYALTKERDTLRRE 440
>ref|XP_002267350.1| PREDICTED: golgin candidate 5-like isoform 1 [Vitis vinifera]
Length = 978
Score = 279 bits (713), Expect = 2e-72
Identities = 194/468 (41%), Positives = 245/468 (52%), Gaps = 54/468 (11%)
Frame = +1
Query: 223 MSWFSGKVSLGNFPDFSEAVNKFSECVKNIEKNFDNALGFXXXXXXXXXXXXGLWPSSTD 402
M+WFSGKVSLG FPD + AVNK SE VKNIEKNFD+ALGF GLWPS+
Sbjct: 1 MAWFSGKVSLGGFPDLAGAVNKLSESVKNIEKNFDSALGFEEKSDPGGEVSSGLWPSA-- 58
Query: 403 RKLLADPVMAIMGHKNEESI-------DRXXXXXXXXXXXXXXXXXXXVKPDSSAVPAIE 561
+A MG K E + +P+SS P
Sbjct: 59 --------IAFMGQKGSEGTTESSEQPESSEQPESSERPESSERPESSEQPESSEQPESS 110
Query: 562 Q--ASIGEDVHEETI-----------------------RLDVHPD-PVEGTNIAIASAEE 663
Q +S GE ET+ + VHP EGT+I IA + +
Sbjct: 111 QLPSSAGEKQEVETVGSTHSPAEEAAPAKEGREPVQIEKDHVHPGISEEGTDIVIADSRK 170
Query: 664 TKIIASEFAEADSKSVLIELSELNTEHVKESVPSNYLQQKDITETVSFENSGLLEAKPSS 843
E+DS+ VL SE E V+ SNY+QQ+ + +V + +
Sbjct: 171 N--------ESDSQLVLAAPSESTVESVESMDSSNYIQQEASSHSVEANSQ-------AD 215
Query: 844 HVDEAESTISVPHELQNVIDRAEIADEQKTREEETVEIVSPMQAEEASFNSQIGSGTEPP 1023
+D+ E +I +P E V D E EQKT E V+ + P+Q EAS +S+ G GTE
Sbjct: 216 EIDQVEGSIIIPDESHKVADLHESTGEQKTGVNEIVDKILPIQT-EASIDSKAGIGTELS 274
Query: 1024 GSNSPTSDE--------------------ASEVVPETISQEGDAITRTFEGNQHGSDHET 1143
S+S T E ASE V E +S E D I + + H D+ T
Sbjct: 275 ASHSATIKETESAGELSEDHLPTTLPSYVASETVSELVSHENDVIAKAVDPQAH--DYNT 332
Query: 1144 NVTEN-LSLGNTSSNTLDSRVELEKVKKDMQMMETALLGAARQAQAKADEIAKLMNENEQ 1320
+V E+ G S+++DS VE+EK+K +M+M+ETAL GAARQAQAKADEIAKLMNENEQ
Sbjct: 333 DVKESAFGSGTNVSDSVDSAVEVEKLKLEMKMLETALQGAARQAQAKADEIAKLMNENEQ 392
Query: 1321 LKAMIEDARRKSNEAEIETLREEYHQRVSVLERKVYALTKERDTLRRE 1464
LK + ED +RKSNEAE E+LREEYHQRV+ LERKVYALTKERDTLRRE
Sbjct: 393 LKIVNEDLKRKSNEAETESLREEYHQRVAALERKVYALTKERDTLRRE 440
>ref|XP_002303293.1| predicted protein [Populus trichocarpa] gi|222840725|gb|EEE78272.1|
predicted protein [Populus trichocarpa]
Length = 975
Score = 264 bits (675), Expect = 4e-68
Identities = 184/457 (40%), Positives = 248/457 (54%), Gaps = 43/457 (9%)
Frame = +1
Query: 223 MSWFSGKVSLGNFPDFSEAVNKFSECVKNIEKNFDNALGFXXXXXXXXXXXX-GLWPSST 399
M+WFSGKVSLGNFPD + AVNK SE VKNIEKNFD ALGF GLWP
Sbjct: 1 MAWFSGKVSLGNFPDLAGAVNKLSESVKNIEKNFDTALGFEDKSDSSSTTEASGLWP--- 57
Query: 400 DRKLLADPVMAIMGHKNEESIDRXXXXXXXXXXXXXXXXXXXVKPDSSAVPAIEQASIGE 579
VM+ MG+K+E+S D D+ + E+ + E
Sbjct: 58 --------VMSFMGNKSEDSTDESSGKTVSPQKLSTVEEKESQNSDTQQTTSAEENQMLE 109
Query: 580 DVHEETIRLDVHPDPVEGTNIAIASAEETKIIASEFAEADSKSVLIELSELNTEHVKESV 759
+ HP+ E + I+ + ++ + E S++ +E E VK
Sbjct: 110 RKKDAE-----HPEIAEKKDDVISDTGKAELES----EIQSETKAVEPPEPVVHDVKVPE 160
Query: 760 PSNYLQQKDITETVSFENSGLLEAKP-SSHVDEAESTISVPHELQNVIDRAEIADEQKTR 936
+ +Q K+I+E EN LE + +S VDE E+ + E NV + DEQ+ +
Sbjct: 161 SVDDVQGKEISEEGCAENLDTLEVRSEASRVDEVEAPSILHDESHNVSHTPDSTDEQEAQ 220
Query: 937 EEETVEIVSPMQAE-----------------------EASFNSQIG-----SGTEPPG-- 1026
EETVE S +QAE EAS +++ G S ++P
Sbjct: 221 AEETVERSSTIQAEVSNEPQPEALNDVQAQASTDILAEASSDTRAGAVLDSSSSQPVSAE 280
Query: 1027 ----------SNSPTSDEASEVVPETISQEGDAITRTFEGNQHGSDHETNVTE-NLSLGN 1173
S++ DEASE+V ++S D +T G++ +D E ++ + +LSL +
Sbjct: 281 VSEMVHEFSLSDASPLDEASEIVSGSVSLADDVHNQTVGGDKRVNDGEIDIKDQHLSLRS 340
Query: 1174 TSSNTLDSRVELEKVKKDMQMMETALLGAARQAQAKADEIAKLMNENEQLKAMIEDARRK 1353
S+++DS +ELEKVK +M+MMETAL GAARQAQAKADEIAKLMNENE LK +IE+ +RK
Sbjct: 341 NISDSIDSTLELEKVKTEMKMMETALQGAARQAQAKADEIAKLMNENEHLKIVIEELKRK 400
Query: 1354 SNEAEIETLREEYHQRVSVLERKVYALTKERDTLRRE 1464
SN+AEIE+LREEYHQRV+ LERKVYALTKERDTLRRE
Sbjct: 401 SNDAEIESLREEYHQRVATLERKVYALTKERDTLRRE 437
>gb|ABD32289.1| tRNA-binding arm; t-snare [Medicago truncatula]
Length = 992
Score = 244 bits (624), Expect = 3e-62
Identities = 168/461 (36%), Positives = 234/461 (50%), Gaps = 46/461 (9%)
Frame = +1
Query: 223 MSWFSGKVSLGNFPDFSEAVNKFSECVKNIEKNFDNALGFXXXXXXXXXXXX-----GLW 387
M+WF+ K + GNFPD + AVNK E VK+IEKNFDNALGF G W
Sbjct: 1 MAWFNAKNAWGNFPDLAGAVNKLQESVKSIEKNFDNALGFEEKDGESSNNEQASESSGSW 60
Query: 388 PSSTDRKLLADPVMAIMGHKNEESIDRXXXXXXXXXXXXXXXXXXXVKPDSSAVPAIEQA 567
P TD K L +PV+A MG+K EE + VP E
Sbjct: 61 PIPTDGKALFNPVLAFMGNKGEEDSEETSENIESSKLESEPEMAEEKPESLDHVPVAEGK 120
Query: 568 SIGEDVHEETIRLD---------VHPDPVEGTNIAIASAEETKIIASEFAEADSKSVL-I 717
+ E + + + VH +G ++ + + E + +
Sbjct: 121 EVIETDKRDNVEAEEITVQEENKVHETEEDGEHVESVDGTTVQDLDHRKDEQQQLPEMPV 180
Query: 718 ELSELNTEHVKESVPSNYLQQKDITETVSFENSGLLEAKP-------------SSHVDEA 858
EL E + + S + ++K+I E + E S ++ +P +S + E+
Sbjct: 181 ELPESPIQKSENSDSISNSEEKEIAEVGTLE-SPVMTQQPMVSNIVDDVVEGSTSELGES 239
Query: 859 ESTISVPHELQNVIDRAEIADEQKTREEETVEIVSPMQAEEA---------------SFN 993
T V H+ V E +E++ EE VE +S +Q E + S
Sbjct: 240 RGTSDV-HDTIGVETEEESKEEERVHTEENVERISSVQPETSDDTEKRDDTDTSVLHSIA 298
Query: 994 SQIGSGTEPPGSNSP---TSDEASEVVPETISQEGDAITRTFEGNQHGSDHETNVTENLS 1164
S+ + T+ + T +E+SEVV + +S + + I E H ++ ET++ E
Sbjct: 299 SEESNSTDQSYNEHQSIATPNESSEVVSDLVSHDNETIVEENE-RDHANNIETDIKEQHL 357
Query: 1165 LGNTSSNTLDSRVELEKVKKDMQMMETALLGAARQAQAKADEIAKLMNENEQLKAMIEDA 1344
+ + DS++ELE+VK++M+MME AL GAARQAQAKADEIAKLMNENEQ KA+IED
Sbjct: 358 SSTQNMHDSDSKLELERVKREMKMMEAALQGAARQAQAKADEIAKLMNENEQFKALIEDL 417
Query: 1345 RRKSNEAEIETLREEYHQRVSVLERKVYALTKERDTLRREQ 1467
+RKSNEAE+E+LREEYHQRVS LERKVYALTKERDTLRREQ
Sbjct: 418 KRKSNEAEVESLREEYHQRVSTLERKVYALTKERDTLRREQ 458