BLASTX nr result

ID: Panax21_contig00027756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027756
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001109553.1| hypothetical protein Poptr_cp075 [Populus tr...   178   5e-43
ref|XP_003638717.1| Cell wall-associated hydrolase [Medicago tru...    78   6e-13
ref|XP_003611001.1| hypothetical protein MTR_5g009380 [Medicago ...    55   3e-06
emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]    55   6e-06

>ref|YP_001109553.1| hypothetical protein Poptr_cp075 [Populus trichocarpa]
           gi|134093265|ref|YP_001109566.1| hypothetical protein
           Poptr_cp088 [Populus trichocarpa]
           gi|133712114|gb|ABO36757.1| hypothetical protein
           Poptr_cp075 [Populus trichocarpa]
           gi|133712127|gb|ABO36770.1| hypothetical protein
           Poptr_cp088 [Populus trichocarpa]
          Length = 86

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/91 (90%), Positives = 84/91 (92%)
 Frame = -3

Query: 275 MDWCGSSTPRTPEYRTMNEERHERKAYWLVIVRPQFLTGGDTKGLCPSIPWIDREGGQSF 96
           MDWCGSSTPRTPEYRTMNEERHERKAYWLVIVRPQFLTGGDTKGLCPSI WIDREGG+SF
Sbjct: 1   MDWCGSSTPRTPEYRTMNEERHERKAYWLVIVRPQFLTGGDTKGLCPSITWIDREGGRSF 60

Query: 95  WFFVEQGFFRVVKELNNENRWRVPDRIDRVM 3
           WF     FF VVKELNN+NRWRVPDRIDRVM
Sbjct: 61  WF-----FFHVVKELNNKNRWRVPDRIDRVM 86


>ref|XP_003638717.1| Cell wall-associated hydrolase [Medicago truncatula]
           gi|355504652|gb|AES85855.1| Cell wall-associated
           hydrolase [Medicago truncatula]
          Length = 385

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 41/83 (49%), Positives = 47/83 (56%)
 Frame = -3

Query: 275 MDWCGSSTPRTPEYRTMNEERHERKAYWLVIVRPQFLTGGDTKGLCPSIPWIDREGGQSF 96
           MDWCGSSTPRTPEYRTMNE +   KA                     ++P   R+GGQ F
Sbjct: 1   MDWCGSSTPRTPEYRTMNEVKRTPKA--------------------SALPSYSRDGGQRF 40

Query: 95  WFFVEQGFFRVVKELNNENRWRV 27
           W      FF VVKELNN+NRWR+
Sbjct: 41  W------FFHVVKELNNQNRWRL 57


>ref|XP_003611001.1| hypothetical protein MTR_5g009380 [Medicago truncatula]
           gi|355512336|gb|AES93959.1| hypothetical protein
           MTR_5g009380 [Medicago truncatula]
          Length = 54

 Score = 54.7 bits (130), Expect(2) = 3e-06
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = -3

Query: 134 SIPWIDREGGQSFWFFVEQGFFRVVKELNNENRWRVPDRIDRV 6
           ++P   R+GGQ FWFF       VVKELNN+NRWR+ DRID+V
Sbjct: 12  ALPSYSRDGGQRFWFF------HVVKELNNQNRWRLSDRIDQV 48



 Score = 21.6 bits (44), Expect(2) = 3e-06
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 154 TPKASALPS 128
           TPKASALPS
Sbjct: 7   TPKASALPS 15


>emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]
          Length = 486

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +2

Query: 164 SRIGASQSLANMLFSHAFLRSWFDIL 241
           SRIGASQSLANMLFSHAFLRSWFDIL
Sbjct: 304 SRIGASQSLANMLFSHAFLRSWFDIL 329


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