BLASTX nr result

ID: Panax21_contig00027748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027748
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284400.1| PREDICTED: transcription factor MYB59-like [...   134   2e-29
emb|CBI16189.3| unnamed protein product [Vitis vinifera]              111   2e-22
ref|XP_002531120.1| r2r3-myb transcription factor, putative [Ric...   105   1e-20
ref|XP_002298375.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-18
ref|XP_002313452.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14

>ref|XP_002284400.1| PREDICTED: transcription factor MYB59-like [Vitis vinifera]
          Length = 258

 Score =  134 bits (338), Expect = 2e-29
 Identities = 67/150 (44%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
 Frame = -2

Query: 788 RKKAQEKKRXXXXXXXXXXXXXXXXXXXTVDSMPIMDTKERNFYDTXXXXXXXXXXXXXX 609
           RKKAQE+KR                    VD +P  +T+ER+F+DT              
Sbjct: 109 RKKAQERKRAISPSSPSSNCSSSAPHNPKVDLLPFSETEERSFHDTGGPKALAPTGKKTE 168

Query: 608 LQQESEKGYSMDEIWNDIVLSDDDKIKPVCGGYNEEVCDFSCP--TIGSPIWDYCPYSLW 435
            ++E++KGYSMD+IW DI  S+++ IKPV  GY EE CDF+CP   + SP+WDYCP SLW
Sbjct: 169 EEKEADKGYSMDDIWKDIAFSEENTIKPVYDGYKEEGCDFACPPNPMASPVWDYCPDSLW 228

Query: 434 MTEQEESKMFLPTSEPFHSLFGQESAFLTG 345
             ++EESKMFLP S+ F S +    A LTG
Sbjct: 229 RMDEEESKMFLPMSDQFISSYEHGMASLTG 258


>emb|CBI16189.3| unnamed protein product [Vitis vinifera]
          Length = 235

 Score =  111 bits (278), Expect = 2e-22
 Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = -2

Query: 605 QQESEKGYSMDEIWNDIVLSDDDKIKPVCGGYNEEVCDFSCP--TIGSPIWDYCPYSLWM 432
           ++E++KGYSMD+IW DI  S+++ IKPV  GY EE CDF+CP   + SP+WDYCP SLW 
Sbjct: 147 EKEADKGYSMDDIWKDIAFSEENTIKPVYDGYKEEGCDFACPPNPMASPVWDYCPDSLWR 206

Query: 431 TEQEESKMFLPTSEPFHSLFGQESAFLTG 345
            ++EESKMFLP S+ F S +    A LTG
Sbjct: 207 MDEEESKMFLPMSDQFISSYEHGMASLTG 235


>ref|XP_002531120.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223529316|gb|EEF31285.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 244

 Score =  105 bits (261), Expect = 1e-20
 Identities = 56/129 (43%), Positives = 67/129 (51%)
 Frame = -2

Query: 788 RKKAQEKKRXXXXXXXXXXXXXXXXXXXTVDSMPIMDTKERNFYDTXXXXXXXXXXXXXX 609
           RKKAQE+KR                      S P  +T E +FYDT              
Sbjct: 109 RKKAQERKRAMSPSSSSSNSSSGSNITTVNSSSPFPETGEASFYDTGGPDSSALGGKSRE 168

Query: 608 LQQESEKGYSMDEIWNDIVLSDDDKIKPVCGGYNEEVCDFSCPTIGSPIWDYCPYSLWMT 429
             Q  EKGYSMDEIW DI    ++ I PVC G+++E C+FSCP+I SP WDYCP  LW  
Sbjct: 169 EVQGGEKGYSMDEIWKDI----ENTIGPVCDGFSKEGCNFSCPSIVSPPWDYCPEPLWRM 224

Query: 428 EQEESKMFL 402
           + EESKM L
Sbjct: 225 DDEESKMLL 233


>ref|XP_002298375.1| predicted protein [Populus trichocarpa] gi|222845633|gb|EEE83180.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 54/130 (41%), Positives = 71/130 (54%)
 Frame = -2

Query: 788 RKKAQEKKRXXXXXXXXXXXXXXXXXXXTVDSMPIMDTKERNFYDTXXXXXXXXXXXXXX 609
           RKKAQE+K                    TV+S P+  T E +FYDT              
Sbjct: 107 RKKAQERK-GAMSPSLSSSNCSSSSNTTTVNSSPLPRTGETSFYDTGGLEQVALAGKNSE 165

Query: 608 LQQESEKGYSMDEIWNDIVLSDDDKIKPVCGGYNEEVCDFSCPTIGSPIWDYCPYSLWMT 429
             Q  EKGYSMD+IW DI    ++ I+PVC G++E+ C+FSCP++ SP WDY P +LW  
Sbjct: 166 AVQGGEKGYSMDDIWKDI----ENTIEPVCDGFSEKGCNFSCPSLASPSWDYFPDTLWGF 221

Query: 428 EQEESKMFLP 399
            +EE K+FLP
Sbjct: 222 GEEEGKIFLP 231


>ref|XP_002313452.1| predicted protein [Populus trichocarpa] gi|222849860|gb|EEE87407.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 50/127 (39%), Positives = 62/127 (48%)
 Frame = -2

Query: 788 RKKAQEKKRXXXXXXXXXXXXXXXXXXXTVDSMPIMDTKERNFYDTXXXXXXXXXXXXXX 609
           RKKAQE+K                       S P   T E +FYDT              
Sbjct: 107 RKKAQERKSVVSPSLSSSNCSSSSNITTVNSSSP-PGTGEASFYDTGGLEQVASAGKNGE 165

Query: 608 LQQESEKGYSMDEIWNDIVLSDDDKIKPVCGGYNEEVCDFSCPTIGSPIWDYCPYSLWMT 429
             Q  EKGYSMD+IW DI    ++ I+PVC G++EE C+FS P++ SP W+Y P  LW  
Sbjct: 166 AVQGGEKGYSMDDIWRDI----ENTIEPVCDGFSEEGCNFSYPSLASPSWEYRPDILWSI 221

Query: 428 EQEESKM 408
             EESKM
Sbjct: 222 SGEESKM 228


Top