BLASTX nr result

ID: Panax21_contig00027746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027746
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283484.1| PREDICTED: F-box/kelch-repeat protein At1g55...   269   1e-69
emb|CCH50979.1| T4.18 [Malus x robusta]                               265   2e-68
ref|XP_002527061.1| Protein AFR, putative [Ricinus communis] gi|...   263   7e-68
ref|XP_002304010.1| predicted protein [Populus trichocarpa] gi|2...   262   1e-67
ref|XP_004142161.1| PREDICTED: F-box/kelch-repeat protein At1g55...   257   5e-66

>ref|XP_002283484.1| PREDICTED: F-box/kelch-repeat protein At1g55270 [Vitis vinifera]
            gi|147841213|emb|CAN64353.1| hypothetical protein
            VITISV_013831 [Vitis vinifera]
          Length = 437

 Score =  269 bits (687), Expect = 1e-69
 Identities = 126/147 (85%), Positives = 135/147 (91%)
 Frame = -2

Query: 1208 REVLSEAYIPGTNTWTPISDGMVAGWRNPSISMNGKLYALDCRDGCKLRVYDEAANCWRR 1029
            REV+SEAYIP TNTWTPISDGMVAGWRNPSIS+NG+LYALDCRDGCKLRVYD   + W +
Sbjct: 286  REVMSEAYIPETNTWTPISDGMVAGWRNPSISLNGQLYALDCRDGCKLRVYDSDTDSWNK 345

Query: 1028 FIDSKLHLGGSRALEAAALVPLNGKLCIIRNNMSISLVDVSSPDKRVESNPQLWENIAGK 849
            FIDSKLHLG SRALEAAALVPLNGKLCIIRNNMSIS+VDVSSPDK VESNP LWENIAGK
Sbjct: 346  FIDSKLHLGSSRALEAAALVPLNGKLCIIRNNMSISIVDVSSPDKHVESNPHLWENIAGK 405

Query: 848  GHFRTLFTNIWSSIAGRSGPKSHIVHC 768
            GHFRTL TN+WSSIAGR+  +SHIVHC
Sbjct: 406  GHFRTLVTNLWSSIAGRNSLRSHIVHC 432


>emb|CCH50979.1| T4.18 [Malus x robusta]
          Length = 452

 Score =  265 bits (677), Expect = 2e-68
 Identities = 125/147 (85%), Positives = 133/147 (90%)
 Frame = -2

Query: 1208 REVLSEAYIPGTNTWTPISDGMVAGWRNPSISMNGKLYALDCRDGCKLRVYDEAANCWRR 1029
            REV+SEAY P  NTWTPISDGMVAGWRNPSIS+NG+LYALDCRDGCKLRVYD   + W +
Sbjct: 301  REVMSEAYTPEANTWTPISDGMVAGWRNPSISLNGQLYALDCRDGCKLRVYDRVTDSWNK 360

Query: 1028 FIDSKLHLGGSRALEAAALVPLNGKLCIIRNNMSISLVDVSSPDKRVESNPQLWENIAGK 849
            FIDSK+HLG S ALEAAALVPLNGKLCIIRNNMSISLVDVSSPDK VESNP LWENIAGK
Sbjct: 361  FIDSKVHLGSSCALEAAALVPLNGKLCIIRNNMSISLVDVSSPDKHVESNPHLWENIAGK 420

Query: 848  GHFRTLFTNIWSSIAGRSGPKSHIVHC 768
            GHFRTL +NIWSSIAGR+G KSHIVHC
Sbjct: 421  GHFRTLVSNIWSSIAGRTGLKSHIVHC 447


>ref|XP_002527061.1| Protein AFR, putative [Ricinus communis] gi|223533566|gb|EEF35305.1|
            Protein AFR, putative [Ricinus communis]
          Length = 437

 Score =  263 bits (672), Expect = 7e-68
 Identities = 123/147 (83%), Positives = 133/147 (90%)
 Frame = -2

Query: 1208 REVLSEAYIPGTNTWTPISDGMVAGWRNPSISMNGKLYALDCRDGCKLRVYDEAANCWRR 1029
            REVLSEAY P TN+WTPISDGMV GWRNPSIS+NG+LYALDCRDGCKLRVYD A + W +
Sbjct: 286  REVLSEAYDPETNSWTPISDGMVGGWRNPSISLNGQLYALDCRDGCKLRVYDGATDSWNK 345

Query: 1028 FIDSKLHLGGSRALEAAALVPLNGKLCIIRNNMSISLVDVSSPDKRVESNPQLWENIAGK 849
            FIDSKLHLG S ALEAAALVPLNGKLCI+RNNMSISLVDVSSP+K VE+NP LWENIAG+
Sbjct: 346  FIDSKLHLGNSHALEAAALVPLNGKLCIVRNNMSISLVDVSSPEKHVETNPHLWENIAGR 405

Query: 848  GHFRTLFTNIWSSIAGRSGPKSHIVHC 768
            GHFRTL TN+WSSIAGR G KSHIVHC
Sbjct: 406  GHFRTLVTNLWSSIAGRGGLKSHIVHC 432


>ref|XP_002304010.1| predicted protein [Populus trichocarpa] gi|222841442|gb|EEE78989.1|
            predicted protein [Populus trichocarpa]
          Length = 435

 Score =  262 bits (669), Expect = 1e-67
 Identities = 122/147 (82%), Positives = 134/147 (91%)
 Frame = -2

Query: 1208 REVLSEAYIPGTNTWTPISDGMVAGWRNPSISMNGKLYALDCRDGCKLRVYDEAANCWRR 1029
            REV+SEAY P T+TWTPI+DGMVAGWRNPSIS++G LYALDCRDGCKLRVYDEA++ W +
Sbjct: 284  REVMSEAYDPETSTWTPINDGMVAGWRNPSISLDGCLYALDCRDGCKLRVYDEASDTWNK 343

Query: 1028 FIDSKLHLGGSRALEAAALVPLNGKLCIIRNNMSISLVDVSSPDKRVESNPQLWENIAGK 849
            FIDSKLHLG S ALEAAALVPLNGKLCI+RNNMS+SLVDVSSPDK VESNP LWENIAG+
Sbjct: 344  FIDSKLHLGSSHALEAAALVPLNGKLCIVRNNMSVSLVDVSSPDKHVESNPHLWENIAGR 403

Query: 848  GHFRTLFTNIWSSIAGRSGPKSHIVHC 768
            GH RTL TN+WSSIAGR G KSHIVHC
Sbjct: 404  GHLRTLVTNLWSSIAGRGGLKSHIVHC 430


>ref|XP_004142161.1| PREDICTED: F-box/kelch-repeat protein At1g55270-like [Cucumis
            sativus] gi|449533335|ref|XP_004173631.1| PREDICTED:
            F-box/kelch-repeat protein At1g55270-like [Cucumis
            sativus]
          Length = 437

 Score =  257 bits (656), Expect = 5e-66
 Identities = 122/147 (82%), Positives = 132/147 (89%)
 Frame = -2

Query: 1208 REVLSEAYIPGTNTWTPISDGMVAGWRNPSISMNGKLYALDCRDGCKLRVYDEAANCWRR 1029
            REV+SEAY P TNTWT +SDGMV+GWRNPSIS+NG+LYALDC+DGCKLRVYD A + W R
Sbjct: 286  REVMSEAYSPETNTWTTVSDGMVSGWRNPSISLNGQLYALDCQDGCKLRVYDSATDSWNR 345

Query: 1028 FIDSKLHLGGSRALEAAALVPLNGKLCIIRNNMSISLVDVSSPDKRVESNPQLWENIAGK 849
            FIDSKLH G SRALEAAALV LNGKLCIIRNNMSISLVDVSSPDKRVESNP LWENIAG+
Sbjct: 346  FIDSKLHFGSSRALEAAALVSLNGKLCIIRNNMSISLVDVSSPDKRVESNPHLWENIAGR 405

Query: 848  GHFRTLFTNIWSSIAGRSGPKSHIVHC 768
            GH RTL TN+ SSIAGR+G KSHIVHC
Sbjct: 406  GHLRTLVTNLLSSIAGRNGLKSHIVHC 432


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