BLASTX nr result

ID: Panax21_contig00027732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027732
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300267.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002527514.1| conserved hypothetical protein [Ricinus comm...    87   1e-15
ref|XP_002527513.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
ref|XP_003631687.1| PREDICTED: uncharacterized protein LOC100854...    77   2e-12
ref|XP_003555294.1| PREDICTED: LOW QUALITY PROTEIN: probable bet...    76   2e-12

>ref|XP_002300267.1| predicted protein [Populus trichocarpa] gi|222847525|gb|EEE85072.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 11/112 (9%)
 Frame = +3

Query: 66  MEGLIPFLLHTLQKQKPHNGYRSLSDTSNRSYHILMGANND--EGSSHRRTRSEFQPYVV 239
           MEGLIPFLLH+++KQKPHN YRSLS  S+RSY +LMG   +   GSSHRRTRS++QP  +
Sbjct: 1   MEGLIPFLLHSIKKQKPHNSYRSLSMGSSRSYRLLMGGEGESVNGSSHRRTRSDYQPPPM 60

Query: 240 VNLSEKRNLN--KGSTLITSNATVSRQIGSSNF-----QVSRDTN--VNIRQ 368
            +L  + NL+  +  +L   +       G S F     Q+ +  N   NIRQ
Sbjct: 61  ESLELRANLDFLRSGSLRKRSVNSPPMTGGSKFDAYPHQMGKQVNNKANIRQ 112


>ref|XP_002527514.1| conserved hypothetical protein [Ricinus communis]
           gi|223533154|gb|EEF34912.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/67 (61%), Positives = 52/67 (77%)
 Frame = +3

Query: 66  MEGLIPFLLHTLQKQKPHNGYRSLSDTSNRSYHILMGANNDEGSSHRRTRSEFQPYVVVN 245
           MEGLIP+LLH ++KQKP N YRS S  S+RSYH+L GA++  GSSHRRTRSEFQP  +  
Sbjct: 1   MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGADSFSGSSHRRTRSEFQPPTMEL 60

Query: 246 LSEKRNL 266
           L +++ L
Sbjct: 61  LDQRQGL 67


>ref|XP_002527513.1| conserved hypothetical protein [Ricinus communis]
           gi|223533153|gb|EEF34911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 197

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/68 (54%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = +3

Query: 66  MEGLIPFLLHTLQKQKPHNGYRSLSDTSNRSYHILMGANND-EGSSHRRTRSEFQPYVVV 242
           MEGLIP++LH ++KQ+PH  Y+S S+ S+RSYH+L+G+ +   GSSHRRTRSEFQP  + 
Sbjct: 1   MEGLIPYILHAIKKQRPHRTYKSFSEGSSRSYHLLIGSGDSINGSSHRRTRSEFQPPAME 60

Query: 243 NLSEKRNL 266
            L ++  L
Sbjct: 61  LLEQRSAL 68


>ref|XP_003631687.1| PREDICTED: uncharacterized protein LOC100854891 [Vitis vinifera]
          Length = 104

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
 Frame = +3

Query: 66  MEGLIPFLLHTLQKQKPHNGYRSLSDTSNRSYHILMGANNDEGSSHRRTRSEFQP----- 230
           MEGLIPFL + ++ +K H+GYR LS+ S+R Y +L G ++  GSSHRRTRSEFQ      
Sbjct: 1   MEGLIPFLFNAIKSKKAHSGYRCLSEGSSRGYRLLAGPDSSHGSSHRRTRSEFQAPKYDF 60

Query: 231 ---YVVVNLSEKRNLNKGSTLITSNATVSRQIGSSNFQVSRDTN 353
                 +      ++NK S    + A  SRQIG  +   S+  N
Sbjct: 61  TDRQPSLGFVRSLSVNKDSLFAHTAAEGSRQIGGFSNNFSKKIN 104


>ref|XP_003555294.1| PREDICTED: LOW QUALITY PROTEIN: probable beta-D-xylosidase 5-like
           [Glycine max]
          Length = 901

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 3/58 (5%)
 Frame = +3

Query: 66  MEGLIPFLLHTLQKQKPHN-GYRSLS--DTSNRSYHILMGANNDEGSSHRRTRSEFQP 230
           MEGLIP+L+H ++KQKPH+  YRS S  ++SNRSYH+L+ + +  GSSHRRTRS+FQP
Sbjct: 794 MEGLIPYLIHAIKKQKPHHHNYRSYSHSESSNRSYHVLLASESFTGSSHRRTRSDFQP 851


Top